Thunnus thynnus (Atlantic bluefin tuna): 137194183
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Entry
137194183 CDS
T11154
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137194183 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137194183 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137194183 (tnr)
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137194183 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137194183
NCBI-ProteinID:
XP_067461916
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Position
12:complement(15663412..15851994)
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AA seq
1386 aa
AA seq
DB search
MPLAQQHHRATVPTTGWVLALVLFLALQGAAHAAPSGDSKLVRTTRVKRQTPGGDQPPSA
SPANQTLWEQPVVFNHVYNINVPLESLCSVDLDASAPPAPGDGSRAELGSTPSVEGPMDP
TGPAEYTEQTLDAESQVTFTHRINIPKAACGCPATITIQQLATRVEMLEREVSLLRAQCG
SGCCGESSAMGRLDFFPGCSGHGSFSLDLCGCICEEGWTGKNCSEPRCPDDCSGQGVCIE
GECVCDRDFGGENCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLC
INGTCQCRPGYVGEDCSLVYCANNCSKKGVCKDGFCVCQDGFAGDDCNSVAPAMNLKIRG
VTDRTITLEWEGSVVLTDFLVTYTPSSPGGVQLEIRIPGNTTTCTISGLETGMEYNINVF
AVINNSISVPASITVSTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDG
GMTAQLPSTITSFVQTGLRPGEEYTVNLVALRDQGRSQPVTATVTTLIDGPTQLIVRDVS
DTVAFVEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVTVSG
VRKGNESGSISTEFITALSFFSEIDAPKNLRLVSKTSTALELEWDNSEAEVDAYQVVYST
LAGDQYEKVIVPQNEGATTKTILTDLLPGTEYGIGISAMRGSNQSTPATMNARTGLDVPM
DLTVTASTDNTITLVWGMVQGPIDHYKVTYTSSSGVTTELTVPKDVTSTTLTDLEPGTEY
TITVAARRGRQQSNAATIDAFTGIRPVTHLYLSEVTSDSVLVAWSAPAPPADLFILSYSS
ADGTDTSKVTLDGSKTRSLVQGLLPSTQYTISLITIQGDITSEPITASLTTGLDPPKELA
VSDVSEDALTISWIRPMAPFEYYKLSYQSARGRVDSVVIDSDVTNYTLSSLFPATEYEIS
INAVRGSQESKVVSTSVFTAMDMPSELTALNITPQGALLRWNPPVSSVDNYVLTLTHNQV
TADTFLVEGNKQEHQLSNLKPSTTYSVGLYATKGPLTSGTVITNLQTPMDAPLNLTASEV
NHRSGLISWQPPIAEIDNYMLTYKSTDGSRKELILDAEDTWIRLEGLAETTEYTVKLQAA
RGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQGVQVYCDMTT
DEGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRISAQGRYELRIDMKD
GQESVYANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCAL
SYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPYVEMKMRPFNYRSISSKR
RRSAPV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgccactggcacagcagcatcacagggccactgtgcccacaacaggctgggtcctggct
ttggttctgtttcttgctctacagggtgccgctcatgctgctccatcaggagacagtaag
ctggttcgtaccaccagagtgaagagacagaccccagggggggatcagcccccatccgct
tccccagccaatcaaaccctgtgggagcaacctgtggtctttaaccacgtctacaacatc
aatgtacccttggagtctctttgctcggtcgacctggacgcctctgcgccacccgcccca
ggtgatggttctcgtgctgagctggggtccacaccctctgtggagggtccgatggatcca
acaggaccagcagagtacactgaacagaccctagatgctgagagccaggtaacgttcact
caccgcatcaacatcccaaaagcagcatgcggttgtccggcaacaatcacaatccagcag
cttgccacacgggtggagatgctggagagagaagtttccctgctcagagctcagtgtgga
tctggttgttgtggggagagctcagccatgggccgtttagactttttcccaggctgcagt
ggccatggcagtttcagccttgatttatgtggctgcatctgtgaggaaggttggactggc
aaaaactgctctgagccccgctgcccagacgactgctccggccagggggtatgcatagaa
ggggagtgtgtgtgcgaccgtgactttggaggtgaaaactgttcagagccacggtgccct
tcagattgctcgggccgtgggttgtgcatcgatggggagtgtgtgtgcgaagaatctttt
actggcgaagactgcatggttgggaggtgcctcaatgactgctcggaccaagggctgtgt
atcaatgggacgtgccagtgccggcctgggtatgtgggagaggactgctcgctggtctac
tgtgcaaacaactgtagcaagaagggagtctgtaaggacggattctgtgtctgccaggac
ggctttgctggagatgactgcaactctgtggcacctgccatgaacctgaagatacgaggg
gtgacggatcgaacaattaccctggagtgggaggggtcagttgtgctgacagatttcttg
gtgacctacacaccaagcagccctggaggtgtgcaactagagataaggattccagggaat
accaccacctgcactatctcaggcctggaaacaggcatggagtacaacatcaacgtattt
gctgttattaacaacagtatcagcgtccctgccagcataactgtttcgacctacctctcc
aatccagatggtttagtcttcaaatccatcacagagacgtcagtggaggtccagtggcaa
ccattttactattccttcgatggatgggagatcagcttcatcccaaaggacaatgatgga
gggatgactgcacaactgcccagcactatcacttcctttgtgcaaactgggctgaggcca
ggagaggagtatacagttaacctggtggctctccgtgaccaaggtcgaagccagccagtc
actgctactgtcacaacactgattgatggccccactcagctgatcgtgcgggatgtgtca
gacactgtagcgtttgtagagtggaccccgccaaaagcaaagattgatcagattgtgctg
cgttatggcctcgtgggaggagaggggccacggaccaccttccgcctccagcccacactc
agccagtactccctgcaggttctgcgtcctggctctcgttatgaggtgacagtgagcggt
gtgaggaaaggaaatgagagcggatctatttccactgaatttattaccgctttatcattc
ttctcagagatcgatgcccccaagaacctgcggctagtatccaagacctccaccgccctc
gagcttgaatgggataacagcgaggctgaggtggatgcctaccaggtggtgtacagcact
ttagcaggagatcagtatgaaaaagtcattgtaccccaaaatgagggagccaccactaag
accattctcacagacctgctgccaggcactgagtacggtattggcatttctgccatgaga
ggcagcaaccagagcacaccagcgactatgaatgccagaacgggcctggatgtgcccatg
gatttaactgtgacggcctctacagacaacaccatcactctggtgtggggcatggtccag
ggccccattgaccactacaaggtcacatatacatcttcttccggtgtgactactgagcta
acggtgcctaaagatgtaacctccaccactctgacagacctcgagcctgggactgagtac
accatcacggtagcagcaaggagaggaagacaacagagcaatgcagctactatagatgca
ttcacagggatcaggcccgtaacccacctctacttgtcagaggtgacttcagactcagtg
ttggtggcgtggagtgccccagcaccacctgctgacctcttcatcctgagctacagctct
gccgatgggaccgacacctctaaggtgacgctggacggctccaagacgaggtcactggtc
caaggcctcctgccatccactcagtacaccatcagtctaatcacaatacagggggatatt
acctctgagcctattacagcatcactcactacaggcttggacccaccaaaagagttggct
gtttcagatgtgagcgaggacgctttgactatctcatggatcagaccaatggctcccttt
gaatactataagctgtcctaccagtcagccagaggtcgagtggacagtgtggtgattgac
agcgatgtcaccaactacactttgtccagtctgtttcctgctacagaatatgagatcagt
atcaacgctgtcagagggagtcaagagagcaaagtggtcagcacctccgtcttcacagca
atggacatgccatctgagttgacagccctcaacatcactccacaaggagccctgctgagg
tggaatccacctgtgtccagtgttgacaactacgtgctgaccctcacacacaaccaggtg
acagctgatactttccttgtggaaggcaacaagcaggagcaccagctgtccaatcttaag
ccaagcaccacctactctgtaggtctctacgccacgaagggacccctcacaagcggcacc
gtcatcaccaacctccaaacacccatggacgcacccttgaacctgacagccagtgaagtg
aatcaccgcagcggtctcatatcctggcaaccgccaatcgcagaaattgacaactacatg
ctcacctacaagtctaccgatggcagccgtaaagagttgatcctagatgcagaagacaca
tggattcgtcttgagggactggctgagactacagagtacactgtcaagctccaggctgca
agaggactagacaccagcgctgtagtctccactaccttcactacagggagtcgactgttt
gcaacacctcagaattgtgcccaacacctgctgaatggagagactctgagcggtgtctac
accatttacatcaacagagaccccagccagggtgtgcaggtgtactgtgacatgaccact
gatgaaggaggctggattgtattccagcgacgtcagaatggcctgacagacttttccagg
aagtggagtgactatcgggttggatttggaaatctggaggatgagttctggcttggtcta
gacaacatccagaggatttctgctcagggccgttatgagctgaggattgacatgaaggac
ggacaggagtcggtttatgccaattatgataaattctctattggagatgctagaaacctc
tacaagctcaggataggggagtacaatggcaccgctggtgactcactgagctaccaccag
ggccggcccttctctacaaaagacagagacaatgacatcgctgtcactaactgtgccttg
tcctacaaaggagcctggtggtacaagaactgccaccgggccaacctcaatggcaaatac
ggcgagtccagacacagtcagggtattaactggtaccactggaaaggccatgagttctct
attccgtatgtggagatgaagatgaggccgttcaactaccgtagcatcagcagcaagagg
aggcggtctgcccctgtataa
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