Thunnus thynnus (Atlantic bluefin tuna): 137194301
Help
Entry
137194301 CDS
T11154
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137194301 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tty01009
]
137194301 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137194301 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
tty03029
]
137194301 (rb1cc1)
Protein phosphatases and associated proteins [BR:
tty01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137194301 (rb1cc1)
Membrane trafficking [BR:
tty04131
]
Autophagy
Autophagosome formation proteins
ULK complex
137194301 (rb1cc1)
Mitochondrial biogenesis [BR:
tty03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
137194301 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
137194301
NCBI-ProteinID:
XP_067462173
LinkDB
All DBs
Position
12:complement(18633321..18651585)
Genome browser
AA seq
1623 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTAYSNYQH
DLEEIKLKLTKLGTAVSVMAKIPLLECLTRHSYRESMEKSSSTPEKESDETEEEKSTDSV
RCATDAKRPSKLSTSFSASGTATCEPTGDQETNEMTDSGGLRAALLDDDTPELANPSFFN
VTLLDWINVQDRPNDVESVVRKCFDSITRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKQLYEAEKFKRETFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLEDLQYLKSCCPLEVQPFLMVPTMCD
FEPLNHHVAKLQQLVQAAQSVDEMSQTITDLLSEQRVSYSQSAQRSTPLTPQSTESIPGT
TASMSSKTPASLNLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIAHPNMDPVLQQG
SLDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRM
HDTTILERENSRIIVLRQVIDKYRSAAEESHSNLRSVKDDLYHLRGLVLKEQHDFGFVLR
SLTTEVHNIVDNICQTHELELKEQHQSELLSLRQELEKQVHTLTEENQVNQNIVRDVQRA
MLELEGLMERKEKELTQLESEKERWLETENSQTERIKDLEQKISNQAEELETLSASRDSL
TSQLENLHFEIERGQQKIRQELEVVEQSHLKDLEDRLKQEHQADLETLTKDNQESLEHLA
AESRAKLSQAADQHTAALREKDNQIKDIEARITELAELRCKLEVELALKESETEEVRLLF
EEAKMQQTEAVKSQVEAETKVLREELTDIKKQLQVKNEEYEVDLAELRTLMRIEKDHCIS
ELVDRHEEETISLRSELSSLQQQAQDSVRTHAEGLQKLKQELEQQVSALSEEKENQLRSS
QELEQELRTVISNLQAENDLLCKKLEQDRQAVEKEEAFKVASPDAFKELEQKKEEMEKRL
SDKIRELENKLQDRQSSKSDAGLSLHADSRADAGAPLSLDSALQERLQQERASLQVQMEL
LEQKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRKVTQQQEKDKALI
ETLSEDRASVMQEKKHLEEELNRLRSTALVSSAFFTPNPSAQEVTEAGAGAAAASRALVV
AGASSSEPLAETDRLASVAAIRDDEHVDSAVEASMVTVHDNILMSEEKQRILLLERTLHM
KEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLY
FLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWN
RKV
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gctgtccaaactgtactggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcggagaggcgagtctgc
agctacagtgctggcactgaaaccaaccccatattcctattcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtc
aaggtggaggagtcactactgatgccagctgtctttcacaccgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgctctttctgtgaacgtttggtt
catgatgaacacctccaacaccaaggctgggctgctattatggctaatctggatgactgc
actctgtcctatcagaaattgctcgtgaaatttgacaccgcgtactcaaattatcaacac
gacttggaagaaattaagttgaaacttacaaagttggggacagccgtttctgtaatggcc
aagataccactgctggaatgtttgacaagacatagttacagagaaagcatggagaagtcc
agctcaaccccagaaaaggaatcagatgagacagaagaagagaaatccactgactctgtg
cgctgtgctactgatgcaaaaaggccctccaagttatcaacatccttctctgcttcgggg
acagccacctgtgagccaactggtgaccaggaaacaaatgaaatgactgacagtggtgga
ctgagagctgccctactagatgatgacactcccgagctcgccaacccgtccttcttcaat
gtcacactattagactggatcaatgtgcaagatagacccaatgatgtggaatcagttgtg
aggaaatgctttgattccatcactcggcttgacccacggatcattcaacccttcctggca
gattgtcgtgacacaattgccaagctagataatcaaaacatgaaagccatcaaagggctc
gaggacaggttgtatgctctagaccaaatgattgcgagctgtaagaagttggtgaatgaa
caaaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggat
acatctgttctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtccgactcaaatggtgctgctatgtgatgcttcatgcagaccaggat
ggagagaagcttcaggctctactcagacttctgacagagctaattgaaagagtgagggtg
gtggatgccctcagtaccgtgccccagatgtactgcttggcggtggtggaggtcgtcagg
agaaaaatgttcatgcgccactacagagagtgggcctatgcacttgtgaaagatggcaaa
cagctgtacgaggcggagaagttcaaaagggaaacctttgggaaactcttcaggaagtca
ttcctcagaaatcgtttgttcagaggactcgattcgtggcctccaacatcattttgtaca
cggaagcccagaaggtttgatgatgaacttccagacatctcacttgaggacctgcagtac
ttgaaatcttgttgtcctttagaggtgcagcctttcctcatggttcctacaatgtgtgac
ttcgagcccttgaatcaccatgtagcgaagcttcaacagcttgtccaagctgcacagagt
gtggatgagatgtctcaaactataaccgacctgctaagtgaacaaagggtatcctatagt
cagagcgcccagagatcaactccgttgaccccacagtccacagaaagcatacctgggacc
accgcatcgatgtcctccaaaacccccgcttcacttaaccttcaagggcccagctgccag
cccctacatgttcccgtcccagctcccttagaggacctatctccagacagcattgatgca
caaacatttgactttgaaaccattgcccatccgaacatggatccagtcctgcagcagggc
tcccttgacctggattctctagcagagagcccggaatcagacttcatgtctgctgtcaat
gagtttgtgattgaagagaacttgacctctccgaaccctatcagtgaccctactagtcct
gaaatgatggtggagtcgctgtattcttctgtcatcaatgctattgacaacaagcgtatg
catgataccacaatactagagagggagaactcaaggatcattgttctcagacaagttatc
gacaaataccgatctgctgcagaggagtcccattccaacttaagaagtgtaaaggatgac
ctgtatcacttacgaggtctggtattaaaagaacaacatgactttggctttgtcctgagg
agtttgaccacagaagtgcacaacattgtggacaacatctgccagacccatgaactggag
ttaaaggagcagcatcaaagtgagcttctctcccttcggcaagagcttgagaaacaggtc
cacacactaacagaggaaaaccaagtaaaccagaatattgtcagagacgtgcagcgcgcc
atgctggagctggagggactcatggagcgcaaagagaaagaacttactcagctcgagagt
gagaaagagcgatggcttgagactgagaacagccagacagagaggatcaaagacctggag
cagaagatcagcaatcaagccgaagagctcgagactctctcagcttcaagagactctttg
accagccagcttgagaatctgcactttgagattgaacgtggccagcagaagatccggcag
gagttggaggttgttgagcagtcacacttgaaggatctggaagacagactgaagcaggaa
caccaggcagacctggagacccttaccaaggataaccaggagtctctggaacatctggct
gctgaaagtagggccaagttaagccaggcagctgatcagcataccgctgctcttagagag
aaggacaaccaaatcaaggacatagaggctcgtattactgagcttgcagaacttcgctgc
aaactagaggtggagttagccctcaaagagtcagagacagaagaggtgaggctcttattt
gaggaggccaagatgcagcagactgaggctgtaaagtcccaggtagaggctgagactaaa
gtcctccgcgaagagctgacagatatcaaaaaacagcttcaggtaaaaaacgaggagtat
gaagtggaccttgcagagctgaggactctcatgaggattgagaaggaccactgcatctca
gagctggttgacagacacgaggaggagactatctcgttgcgcagcgagctctcctccctg
cagcagcaagcccaggattctgtcaggacccacgctgaggggttacagaaacttaagcag
gaattagagcagcaagtgtctgctctaagtgaagaaaaggaaaatcagttgaggagttct
caagaactggagcaagagttgaggactgttatcagtaatttgcaggcagagaatgacctg
ctctgtaaaaaactagagcaggacagacaagcagttgagaaggaagaggcctttaaggtt
gcatcaccagatgcctttaaagagttagagcagaaaaaggaggagatggaaaagagactg
tcagacaaaattagagaacttgagaataagcttcaggacagacaatcctcaaagagtgat
gcagggttgtcgctgcacgctgacagccgtgcagatgccggagcacctctgtctctagac
tcagcactacaagagcggctgcagcaggagagagcctccctgcaggtccagatggagctc
ctggagcagaagaagaatgaggagatacagaatctcaagacatcactaatcgcagagcag
cagactaatttcaacactgttctaacccgagagaagctgaagaaggagcagatcatcaat
gagcttacagagaagttgcggaaagttacccaacagcaggagaaggacaaagctctgata
gagaccctttccgaggaccgggctagcgtcatgcaggaaaagaaacacttggaagaagag
cttaaccgcctccgcagcactgctctggtttcttctgccttcttcactcctaacccctca
gctcaggaggtcacagaagctggagcaggagccgcagcagcatccagagctctggttgtc
gctggagcctcttcctctgagcccctggctgaaactgacagattggcctctgtggcagcc
attagagatgacgaacatgtcgactcagcagtggaagctagcatggtgacagtccatgac
aatatcttgatgtcagaagagaaacagcggatactcttactcgagaggactttacacatg
aaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtccgta
tcgtcacggcattcagacaaaatcgccatcagagatttccaggtaggcgatttggttcta
atcatcctggatgaaaggcatgacaactacgtgctgttcacagttggtcccaccctctac
ttcctccactcagagtctctcactgcactggacctcaaaccagcatcagggacctcaaga
cggccatgggtacttggaaaagtgatggagaaagagtattgccaggcaaaaaaggcccag
aacaggttcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaac
agaaaagtataa
DBGET
integrated database retrieval system
