Thunnus thynnus (Atlantic bluefin tuna): 137194337
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Entry
137194337 CDS
T11154
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137194337 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
137194337 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137194337 (thoc1)
03041 Spliceosome [BR:
tty03041
]
137194337 (thoc1)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137194337 (thoc1)
Spliceosome [BR:
tty03041
]
Complex C
Other components
EJC/TREX
137194337 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137194337 (thoc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
137194337
NCBI-ProteinID:
XP_067462269
LinkDB
All DBs
Position
12:19455780..19462165
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AA seq
653 aa
AA seq
DB search
MSPSLFKFVDAKDKFTASTIQALAGKNSKPIITAFNQILGNETEKKSTLDQALRGVLGDQ
IVEQKASCDDYLSLIYLSIDAVTEGICSATTPFLLLGDVLDSLPLDQCDKIFSFVEENVS
TWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKHTEEKEEGMEVEEGEMGEEDLPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSFKLDDMQASKRKLEELRASGREHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCILNDDQTTWIEETTKLV
YQLLREIPPDGDKFATMVEHILNTEENWNGWKNEGCPSFVKERPVDDKPKRPTRKRQAPE
DFLGKGPDRKIFMGNDELTRLWNLNQDNMEACKSDSREFMPSLDEFFAEAIEQADPANMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDNGDNLLKESNDSPSIQSKLVTNQQMDDIAAKLGTQWRTLATHLEMKAAEV
REIETDSEDVDMQAKLLLVAWQDREGTQATVENLVSALNAAGFSQIADSLSEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtccttatttaagtttgtcgacgctaaagacaaatttacggcttctaccata
caagccctggctggtaaaaacagcaaacctataataactgctttcaatcagatccttggg
aatgagacggaaaagaagagcacacttgaccaggctctgaggggggtccttggtgaccag
attgttgagcagaaggcgagctgtgatgactatctgtctctcatctacctgagtatagat
gccgttacagagggtatctgctctgctacgactcctttccttctgctgggagatgtactg
gacagtcttcctcttgaccagtgtgacaaaatcttctcctttgtcgaggagaatgtctcc
acctggaaatcgaactccttttatactgccgggaagaactatttgttgaggatgtgtaac
gatcttttaaggaggctttccaagtctcagaatactgtattctgcgggcgaatccagctt
ttcctggcacgtcttttccccctgtctgaaaaatcaggtctgaatctacagagccagttc
aacctggacaacatcacggtattcaacaaaaatgaacaagaaagtactcttggacaaaag
cacacagaagaaaaggaagaaggtatggaagtagaggaaggagaaatgggagaagaggat
ttacctgcaccatgctcaatcccgattgactacaacttgtacagaaagttctggacactg
caggactacttcagaaaccctgtgcagtgttacgataaattctcttggatgacattcctc
aagtactcagatgagaccttggcagtattcaagagcttcaagctggatgacatgcaggcc
tctaaaagaaagctagaggagctgagagcatctggaagagaacatgtctactttgccaag
ttcctaacaagcgagaagctgatggacttgcagctcagcgacagcaacttcaggcgccat
attctacttcagtacctcatcctcttccagtacctgaagggtcaggtgaaatttaaaagc
tccagctgcattctgaacgatgaccagaccacatggattgaagagacaactaaactggtt
taccagctactgagagagatccctcctgatggggacaagtttgccacaatggttgaacat
atcctcaacacagaggagaactggaatggttggaaaaacgagggatgcccgagctttgtg
aaagaacggccagtcgatgacaaacccaagaggcccaccaggaaaagacaagctccagaa
gacttcctcggaaaaggacctgaccgcaagatcttcatgggaaatgacgagttgactcga
ctgtggaacctgaaccaagacaacatggaggcctgcaagtcagacagcagggagtttatg
ccatccctggatgaattctttgcagaggccattgaacaggccgaccctgctaacatggtg
gaggaggagtacaaggttgtgcggaacccaaactacggttggcgtgctctgaggctgctg
tccaggagaagtccgcacttctttcaaccgacaaaccagaagttcaagagcctggcggac
tatttagacagcatggttagcaaactggccaaagaactgccgaaggatatcccttctgaa
gagatcaagacgggtgaagaagatgacgacaacggagacaatcttctcaaagagagcaat
gacagtccaagcatacagagcaagcttgtgacaaaccagcagatggatgacatagcggcc
aaacttggcactcagtggaggacgttagccactcatctagagatgaaggcggcggaggtg
cgtgagatcgaaacagacagcgaagatgtcgacatgcaggccaagctgctgctggttgcc
tggcaggacagagagggaacacaagctactgtggagaacctggtctcggctctcaacgct
gctggattctcccagattgcagacagcctcagtgaggcttga
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