Thunnus thynnus (Atlantic bluefin tuna): 137194453
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Entry
137194453 CDS
T11154
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137194453 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137194453 (ndc1)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137194453 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
137194453
NCBI-ProteinID:
XP_067462461
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All DBs
Position
12:22656506..22665117
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AA seq
669 aa
AA seq
DB search
MFSAEQSCWFVRKVICWRAAASIAWAVLLLPPTKAVFVILSGFSLLHPIQTISECLSLLG
SGSAIFSLILLCGVILMVGFLNLEYYTVIPTIPCSKIALLGQLLHPRQFVNSLAHCIMGI
IVAWCCAVTIGGRYETLGYPCTQSDGSPQMCLNEYHLILLLAGAFVGFSHSLLGVIHNMN
YVSFHTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIIVYLFLGYIPRAWICKTLNLHL
NSSDNPLDTFAGLLDLSLFYHLWISATFLLCTWYITLLLFRIFVTEVYSFPVQSSFTDDI
HQCLPKVLTDKHPMILKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLIAYHDTIATNGRAKSLSTGSERKTSSEASVTSGTEDLMSPRPTLLMKTPAS
VFARSIVGGPSSPLTAPFTPDLNSPFASPGLRRLTTPVEQCSPWHGSVQSPHIMRRAPKL
WSTSTDSLANGSPPSSPASVPSPKQESSKPSLLAQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASYSEDQFGVVQTALPNILSCMLVLQEAVDRH
FKLPHASSKPVRSTSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQMSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgcagagcaaagttgttggtttgtccgtaaggtgatttgttggagagctgcg
gctagtattgcttgggctgtcctcttgttgccacccaccaaagccgtttttgtgatcctc
agcggattcagtcttctccacccaatccagacgatatcagaatgtctgtccctcttaggg
agtggaagtgccatcttctccctcatcctgctatgcggagtgatcctcatggttgggttc
ctgaacctcgagtattatacagtcatcccaacaatcccatgctcaaaaatcgcccttttg
ggtcagctgctccaccctcgtcagtttgttaactccttggcccactgtatcatgggaata
atcgtggcctggtgttgtgccgtcaccatcgggggcagatacgagacgctcggttaccct
tgtacacagagtgatggctcccctcagatgtgtctgaatgagtatcacctcattcttctg
ctggcaggagcctttgtaggattttctcacagtctattgggtgtgatccacaacatgaac
tatgtttctttccacactgttcagcaatacaagtaccttcgctttaagggatccctacct
ctggtggtgaagtgcagtgccactcaagcactttactctatcaggaactacattatagtg
tatttatttttgggttacattccgagggcatggatctgtaaaacgctcaatcttcatttg
aacagctctgacaatcctctcgacaccttcgccggactgctggacttgtccctgttctac
cacctgtggatcagtgccaccttcctcctctgcacatggtacatcacactgctgctcttt
aggatctttgtcactgaggtgtacagttttcctgtgcagtcatcttttactgatgatatc
caccagtgtcttccaaaagttcttactgacaagcatccaatgatattgaagtttctagcc
ctgcaggacttggctctgctgtctcaacactccccgtcacgacgctgtgaggtcttcagt
ctgagtcagccaggtggccatcctcataactggaatgccatcagcaaggagtgtttgtct
ctgctggctgatctgactcagagactcatagcctatcatgatactatagcaaccaatggc
agggcaaaatcactatctactggaagtgaaaggaagacttcatcggaggcatcagtaacc
tcaggcacagaggatcttatgagccccaggcccactttactcatgaaaacaccggcctct
gtctttgcccgctccatcgttggtggtccttcgagccccctgacggcaccattcacccct
gacctgaatagcccctttgcttctccgggcctgcggcgtctcaccactccagtagaacaa
tgctcgccatggcacggatccgtgcagagcccacacatcatgaggagagccccaaaactc
tggtccacctccacagattcactggccaatggcagtcccccgtcatcccctgcctcagtt
cccagtccaaagcaggaatcctccaaaccaagtctcctggctcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
ctcccagaagcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaggggctgtcttaccttgttcaagcctcttactcagaagaccagtttggcgttgtacag
actgcattacccaacattctcagttgcatgcttgtcttacaagaggcagtagatcgacac
ttcaaactgcctcacgcctccagtaagcccgtcaggtcaacgagcagcatgggagactca
acttacaaaacactgcgcttcgctctcagggccacgctcaagactgccatctacaggata
acaaccacttttggagatcacttaaatgctgttcagatgtctgcagagcaccggaaacga
ttgcaacagtttctggagtacaaggaataa
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