Thunnus thynnus (Atlantic bluefin tuna): 137194525
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Entry
137194525 CDS
T11154
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137194525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137194525
Spliceosome [BR:
tty03041
]
Common components
Common spliceosomal components
hnRNP proteins
137194525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
PPP4R2
Cwf_Cwc_15
RRM_5
WHD_MCM8
Nup35_RRM_2
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
137194525
NCBI-ProteinID:
XP_067462595
LinkDB
All DBs
Position
12:24605632..24615521
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AA seq
319 aa
AA seq
DB search
MDRSPTTSSLMASSNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFAKYGKIVGCSIH
KGYAFVQFANERNARSAVAGEDGRMIVGQVLDINLAGEPKPHRSKTTKRSAGDMYSSSSF
DLDYDFQRDYYNRMYSYPSRVPAPPPPLSRAVIPSKRPRVSLSSGGSSRRTKSSFSSSSK
SSQRTSSSRTMKVDELQTIKRELSQIKSKVDDLLESLEHMEKDHSKKSEAKKTEPGEVTS
PPHTSNKKDDGIKRERESQELNDSDEDDDDEDEEEGDLLEEEEVKSQEREDDDEEEEEEE
GEHVEGDDDADSVNGEEDS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcacccaccacctccagcctgatggccagcagcaacgtcaccaacaagacc
gacccccgctcccttaactcgcgggtcttcatcggcaacctcaacaccctgctggtcacc
aaggcggatgtagaggccatcttcgccaaatacggcaaaatcgtgggctgctccatccac
aagggctacgccttcgttcagttcgccaatgagaggaacgcccgatccgccgtcgccggg
gaggacgggcggatgattgtcggacaagtactcgacatcaacctggctggggaacccaaa
ccacaccggtcaaaaacaaccaaacgctcagctggagacatgtacagcagttcctcattc
gacctcgactatgactttcagagagattattacaacagaatgtactcgtacccgtcccgt
gtccccgctccccctccccccttgtcgcgggccgtgatcccgtccaagcgcccgcgggtc
agcctcagcagtggaggaagcagccgacgaaccaagagcagcttctcttcttcatccaag
agcagtcagaggacttcctcgtccagaacaatgaaagtggatgagctgcagaccatcaag
cgggagttgtctcaaattaaaagcaaagtggacgacctgctggagagcctggagcacatg
gagaaggaccacagcaagaagtcagaagcaaagaaaacagaaccgggtgaggtcacttca
cctccgcacacaagcaacaagaaggacgacgggataaagagggagagggaaagccaggag
ctgaacgactcagatgaggacgacgacgacgaagacgaagaggagggagacctgctggag
gaggaagaggtgaagagtcaagagagggaggacgacgacgaagaagaggaggaggaggaa
ggtgagcacgtggaaggcgacgacgatgctgacagtgtgaacggcgaagaggactcgtag
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