KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137194544
Entry
137194544         CDS       T11154                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:tty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tty04131]
    137194544 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tty04147]
    137194544 (copa)
Membrane trafficking [BR:tty04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    137194544 (copa)
Exosome [BR:tty04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   137194544 (copa)
  Exosomal proteins of bladder cancer cells
   137194544 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 137194544
NCBI-ProteinID: XP_067462621
LinkDB
Position
12:24854341..24868743
AA seq 1223 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAELLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDAP
GGEGWGDDAELQLDEDGFMDAQEGLGDDGGMGKEEGGGWEVEEDLDLPPELDLPSGAGGG
AEDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVSFGPYKSLFMQ
TLSRGRTCYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGR
FEDAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIVGLTMETERKKLPKDTLDQQ
KRLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQT
RKILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQIC
RVTQVTEIGKDVIGLRVSPLQFR
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgttaaccaaatttgaaacgaagtcggcccgtgttaaaggcctgagcttccatcccaag
aggccatgggttcttgctagtttgcacaacggtgtcatccagctgtgggactatcggatg
tgcacactgattgacaagtttgacgagcatgatggtcctgtcagaggaattgatttccac
aaacagcagcccctgtttgtgtctggaggagatgactataaaatcaaggtgtggaactac
aagctgagacggtgcctcttcaccctccttggacacctcgactacatcagaaccaccttc
tttcaccatgagtacccctggattctgagtgcctcagatgaccagaccatccgcatctgg
aactggcagtccaggacttgtgtctgcgtgctgaccggccataatcactatgtgatgtgc
gcccagttccatccatctgaggacctggtggtgtcagccagtctggaccagaccgtgcga
gtgtgggatatctccggtctgaggaagaagaacctgtctcctggcgctgtggagacggat
gttcgcggcatctctggtgttgacttgttcggtgcatcagatgccgtcgttaagcacgtc
cttgagggtcatgaccggggggtcaactgggcagccttccaccccagcatgcctctcatc
gtgtctggagccgacgacaggcaggtcaagatctggaggatgaatgaatccaaggcatgg
gagctggatacgtgccgcggacactacaacaatgtgtcctgtgccgtcttccacccacgt
caggagctcatcctgtccaactctgaggacaagagcattcgggtgtgggatatgtccaag
aggaccggagtccagaccttccgccgggaccacgatcgcttctgggtgctgggggctcac
ccaaacctcaacctgtttgctgctggtcatgacagcggcatgatcgttttcaagctggag
cgtgagcgtccagcatacgccgtccacggcaacatgctgtactacgtcaaggaccgtttc
ctccgccagctggacttcaacagcagcaaggacactgctgtcatgcagctacgcagtggg
tccaagtttccagtgttcagcatgtcttacaacccagctgagaacgctgtcctgctctgc
actagggcaaccaatctggagaacagcacctatgacctgtactctattcccaaagaaagt
gactctcagaaccctgatgcgccggaggggaagagatcctctggtctgacagcagtctgg
gtggccaggaaccgatttgccgtcctggaccgtatgcactctctgctgattaagaacctg
aagaatgaaatagtgaagaaagttcaggtgccgagctgcgaggaaatcttctacgcgggg
acgggctcgctgctgctgagagatgccgacggcgtcacgctgttcgacgtgcagcagaaa
cgctcgctggccaccgtcaagatcgccaaggtcaaatacgtggtgtggagcgctgacacc
agccacgtggctctgctggctaaacacgccatcatgatttgcaaccgtaagctggagagt
ctgtgcaacattcatgagaacatcagagtgaagagtggagcctgggacgagagcggagtc
tttatctacaccacctccaaccacatcaaatacgccctcacctctggtgatcatggcatc
atcaggactctggacctgcccatctatgtgacccgtgtgagaggcaacagtgtttactgt
ctggacagggagtgcaggccacgcgtcctcaccattgaccccacagaataccgcttcaaa
ctggccttagtcaaccgtaaatatgatgaggtgctccacatggtgcgtaatgccaagctg
gtgggccagtcaatcattgcttacctgcagaagaagggctatcctgaggtggcgctgcac
tttgtcaaagatgagaagacccgctttagtttggctctggagtgtggcaacatcgaggtg
gcactggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggtgaggca
gcgctgctgcagggtcaccaccaggttgtggaaatgtgctaccagagaaccaagaacttt
gacaaactcaccttcctctacctcatcactggcaacttggccaagctgcgcaagatgatg
aagattgctgagatcaggaaggacatgagcggtcactaccaggcagctctctacctggga
gacgtcagtgagagggtccgcatcctgaagaactgtggacagaagtctctggcttacctg
actgcagccactcatgggctggatgaagaggccgaggccctaaaggagacctttgaccca
gaaaaggagacggtgccggaggttgatcccaatgcagagctgctgcagcctcctccaccc
atcaaccctctggacaccaactggcctctgctcactgtatcaaagggcttctttgaggga
gccattgcagcgaaggggaaagccggtcagatggctgccgacctggacatggatgctcca
ggaggcgagggctggggagacgatgccgagcttcagctggatgaagatggcttcatggat
gcccaggaaggattaggggacgatggaggaatgggtaaagaggaaggaggaggctgggag
gtggaggaagacctggaccttcctccagagctggacttgccatctggcgcaggtggagga
gcagaagacggcttcttcgtcccacccaccaagggcatgagtccgacccagatgtggtgc
aacaactcccagctgccggtggaccacatcctggctggttccttcgagactgcaatgaga
ttgctccacgaccaggtaggagttgtgagcttcggcccctacaagtcgctgttcatgcag
acgctgtccagaggccgcacctgttacctgggtctgccctccctgccctgcctgcgtggc
catccccagaggaactggaaggactgtggagcaaagcaggggcttcctgctgtgggcctg
cgcctctccgacctcatcgcccgtctgcagcaatgctaccagctgaccacttccgggcgg
tttgaggacgccgtcgagcgcttcagagccatcctgctgtctgtgccactgctcgtggtc
gataacaagcaggagattgctgaggctcagcagctgatcacaatttgcaaagagtacata
gtgggtctgacaatggagacggagaggaagaagctgcctaaagacactttggatcagcag
aagaggctttgtgagatggccgcttatttcactcactgtaatctccagccagtccacatg
gtgctggtgttgcgcacagctctgaacctcttctttaaactgcgcaacttcaagaccgct
gccggctttgcacgacgcctgctggagctcggaccgaagccagatgttgcacagcagacc
cgcaagattttggcagcctgcgagaagaccctgacagacgcccaccagttgaactacgac
ccccacaatccatttgacctgtgcgctgcctcctttgtccccctgtaccgcggacgccca
gtcgagaagtgtccactgtctggagcctgctactgccccacgtacaaaggccagatctgc
agggtcacacaggtgacagagatcggtaaggacgtgatcggtctgcgtgtgagtccactt
cagttccgttaa

DBGET integrated database retrieval system