Thunnus thynnus (Atlantic bluefin tuna): 137194749
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Entry
137194749 CDS
T11154
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tty01002
]
137194749 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tty04121
]
137194749 (vcpip1)
Enzymes [BR:
tty01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137194749 (vcpip1)
Peptidases and inhibitors [BR:
tty01002
]
Cysteine peptidases
Family C64
137194749 (vcpip1)
Ubiquitin system [BR:
tty04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
137194749 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
137194749
NCBI-ProteinID:
XP_067462977
LinkDB
All DBs
Position
12:complement(31091619..31106718)
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AA seq
1177 aa
AA seq
DB search
MSLLQSSKKKDKRILSGTCPDPKCQARLFFPAHGSVSIECTECGQRHEQKNLINVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLTRYGMDKQTGKARLLR
DMNQGEMFDCSLLGDRAFLIEPDHVSTMGYGKDRSGSLIYLHDTLEEVKKANGSRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKSLFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVAEE
QCRGKDGKLNKPICIAWSSSGRNHYIPLVGIKNTVLPKLPARLLPKAWGVPQELIRKYIK
LEPDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHSIHPSLVADVHQYVYRRTGVIGIQP
EEVTEAAKKSVMENRLHRCLICGALSELHVPAEWLVPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPQRDVLIPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETEPALNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDTTETPQVVDPQP
PTKIILTGQKAKTLHKEELTMSRAERSLQQSISEQAFVTQKRRTDRLKQEQKGHGRTSSP
SGSPETSSSSAPATPTKSSSPSSSSKEKKIRVTTSDGRQAMLTLQAHTTFSELQRSIANQ
FSVPPAQQCIRYGFPPKELVPPKDGEENEPVALQHGDRVTVEILRGPEDKSPAASIPRAS
SSHSVKSEDAVTSGRMSSRELQDSIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVF
YNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDTAGHFPVGPEVEELVKEALV
QLRSEAATRGSREGSPSHGVLRLGSGGVVRKKEQLQSVTAFQGKGHSLGSSGGSSPPEHR
PITRQHSSGVDLSASVSRGPPDLSDIPEDATRELVRMAPGFVTMKDGRGVDPSLMEQQRR
KLQEMVSSIQASMERHLREQQSTAAAGGGASQERTGGTKTGAGQPTSATNHEPPAAAGAA
EVAAAAASKPEGKTEEPEEMESQDAEQSNATEPMDHS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgcagagctcaaagaagaaagacaagcgtatattgtctggtacctgccca
gacccgaaatgtcaggcgaggctcttcttccccgctcacggctccgttagcatcgagtgc
accgagtgtggtcagcgccacgaacagaagaacctgataaatgtcgaagaagtgacggat
ccagatgttgtgctccacaatctgctcagaaatgcgctgctcggcgtcaccggggcccca
aagaaagggaccgagctagtgaaggtgatggggctgtccaactaccactgcaagctgctg
tctccggtcctcaccaggtacggcatggacaaacaaacgggcaaagcccggctgctgagg
gacatgaaccagggcgagatgtttgactgctcgctgctgggagacagagctttcctgatc
gagccggaccatgtctccaccatgggctacggcaaggaccggtccgggagtctcatctac
ctccacgacactctggaggaggtgaagaaagccaatggcagcagagaatgtctcatcccc
gtccatgtggatggagacgggcactgcctggtccatgccgtgtctagagcgctggtgggc
agagaactgttctggcacgccctgagagagaacctgaagcagaacttcaagcagaacctg
gaccgctacaagagcctctttcaggattttattgatgctgctgagtgggaggacatcatc
aacgagtgcgaccctctattcatcccgcctgaaggtgtcccgctcgggcttcgcaacatc
cacatattcggcctcgccaacgtcctgcaccgccccatcatcctgctggactccctgagc
gggatgaggagctcaggggattactcagccacctttctgcccgggctggtggcggaggag
cagtgcagggggaaagacgggaagctcaacaaacccatctgcatcgcctggagcagctct
ggcaggaaccactacatccccctggtgggaatcaagaacacggtgctgccgaagctgccg
gcccgcctgctgccaaaggcctggggtgtcccgcaggagctcatcaggaagtacatcaag
ctggaaccggacggaagctgtgtgattggcggtgaccgcagcctgcaggacaaatatctg
atgaggctggtcaacgccatggaagaggtgttcatggagaagcacagcatccacccgtca
ctggtggccgacgtgcaccagtacgtctacagacgcactggtgtgatcggcatccaaccg
gaggaggtgactgaggcagctaagaagtcggtgatggagaaccggctgcaccgctgcctg
atctgcggtgccctctctgagctccacgtgccggcagagtggctggttcctggcgggaag
ctctacaacttagccaagtccacacacggtcagctacggccggacaagaactacagcttc
ccgctcaacaatgtagtctgctcgtatgacccccagagagacgtcctcatcccagattac
aaactgagctccctcaacacctgcaactggtgtcatggcacatcagtacgccacatccac
ggcaacgggtcggtggtttacctggacggggacagaaccaacacccgctcccagggcggg
aagtgtgggtgtggctttaagcattactgggaagggaaggagtacgacaacctccctgag
gccttccccatcacactggagtgggggggccgggtggtgcgggagacggtgtactggttc
cagtatgagactgaaccggctttgaacagcaatgtgtatgatgtggccatgaagctggtc
actaaacacttcccaggggagtttggcagcgagatcctggtgcagaaagtcgtcaacacc
atcctacatcacactgccaagaagaaccccgacgagtacaacccggtgtccatcgacggg
gcccacgcccagcgcctcaccgacaccacggagactccgcaggtggtggacccccagccg
cccaccaagatcatcctgacaggtcagaaagcaaagacgctccacaaggaggagctgacg
atgagccgggcggagcgcagcttgcagcagagcatcagcgagcaggccttcgtcacacag
aaacgccggaccgaccggctgaagcaggagcagaaaggccacggccggacatcttccccc
agcgggtctcctgaaacctcctcctcctcagctccggccacgcccaccaaatcctcctcc
ccctcctcgtccagtaaggagaagaaaatccgtgtgaccaccagtgacggcaggcaggcc
atgctgaccctgcaggcccacaccaccttctcagagctgcagaggagcatcgcaaaccag
ttcagcgtgccgccggcgcagcagtgcatccgctacggcttcccgcccaaagagctggtc
ccgcctaaggatggcgaggagaacgagccggtggcgctgcagcacggcgacagggtgacg
gtggagatactgaggggccctgaggacaagagccccgcggcctccatacctcgcgcctcc
agctcacactcagtgaagagtgaggacgccgtgacgtccggcaggatgagcagccgtgaa
ctccaagacagcattgaccttgagatgtcctccctctgtctcctagcaaccctgatgggt
gaggacgtttggtcgtacgcaaagaagctgccgcacttattccagcagggaggcgtcttt
tacaacattgtcaaaaaggacatggggctgatggacgggaagcactgcactctgcctcac
ctgacggggaagacgtttgtctacaacgcagcagaggagcggctggagctctgcgtggac
actgccggtcacttccccgtcggccccgaggtggaggagctggtgaaggaggcgctggtc
cagctgcgctcggaggcggccaccaggggcagcagagaggggagtccgtcccacggcgtg
ctgcggctgggcagtggcggcgtggtgcgcaagaaggagcagctgcagagcgtcactgcc
ttccagggtaaaggccactctctgggcagcagcgggggctcctcccctccagaacaccga
cctatcacgcgccagcacagcagcggcgtggacctgagcgccagcgtgtcccgaggcccc
ccggacctgtcggacatccccgaggacgccaccagggagctggtccgcatggcgccgggc
ttcgtcaccatgaaggacggccgcggcgtggaccccagcctgatggagcagcagcggagg
aagctgcaggagatggtgtcctccatccaggcctccatggagcgccacctgagagagcag
cagagcacggctgccgcagggggaggggccagccaggagcggacaggcgggactaagacg
ggagccggccagccaacatctgccaccaaccacgaacccccagctgcagcaggtgcggcg
gaggttgcggcggcggcagccagcaaaccagaggggaagacggaggaaccagaggagatg
gagagccaggacgccgagcagagcaacgccactgaaccaatggatcactcctga
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