Thunnus thynnus (Atlantic bluefin tuna): 137194779
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Entry
137194779 CDS
T11154
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
tty04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137194779 (lamc1)
04518 Integrin signaling
137194779 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137194779 (lamc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
PspAA
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
137194779
NCBI-ProteinID:
XP_067463033
LinkDB
All DBs
Position
12:complement(32109807..32176329)
Genome browser
AA seq
1594 aa
AA seq
DB search
MRSLIRALVAWSWVAMCVRAAMDECADDQSRAQRCMPEFVNAAFNVTVVATNTCGNPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEGGPWVPYQYYSGSCEKTYQKASRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSRGRLVCNCKHNTEGDD
CNVCKPFYNDRPWRRATSDNAHECLACNCNGKSSECYFDTELYRATGHGGHCRNCADNTD
GPNCERCLDNYYRDQSGSRCLPCGCNSIGSESPQCDNRGVCVCKPGVTGEKCDRCQQGYH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFNCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCNSAEGFSVHSISSSFYRDDEQWSAQQRDGSSVSVRWSPSGQEISLISDDYF
PMYFVAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTAIKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRARPELGAFSPCEPCNCNGHSDACNP
DTGACDCQHNTAGLSCERCKDGFYGDASRGTSGDCQPCPCPAGATCAVVPKTREVVCTNC
PTGTTGKRCELCDDGFFGDPLGQGGPVRTCRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNALASNPADKCKPCSCSPAGTVGRQTSCSQVTGQCQCLPNVAERD
CSACQPGFFNLLSGNGCERCNCNPIGSTNGQCDITTGQCECQPGVTGLHCERCEVNFFGF
GSSGCKPCDCDPEGSQSGQCKEDGRCVCRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGEGTVSDKAFEDRLKEAERAIMELLEEAQASKDV
DKGLLDRLNNINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAEDLIARARQELDKA
KDAIGKVDIKPPSGAGDPNNMTLLAEEARKLADKHKMDADQIVKIAKDANDTSTKAYNLL
MKTLDGEGKTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGNKALKIFANLTSLP
PFDTKALEDEAGKIKKEASDLDKLIDKTEKEYNDLRDDLKAKELEVRKLLEKGKSEQQTA
DQLLARADAAKAQAEEAAKKGQSTFREAESILNDLRDFDKRVNDNKTAAEDALKKIPAIN
ATIMAAKEKTKQAEAALGNAASDAREAKNKAEEAERIASNVQKGSAKTKEDAEKAFQDTD
KLDKEVNDMMDQLSAAEQDLAKKKAEADQDMMMAGMASDNAKEAEDNARKAKSAVKAVLS
TITSLLDQLGNIDKVDLSRLNQIDESLKRAKGKMANSDLDKKLAELNEVARTQGEMIDDY
DRQIREIRADISNLNDIKNTLPEGCFNTASMERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtttgatccgagctctggtggcttggagctgggtggcgatgtgcgtccgcgcg
gctatggatgagtgcgcggacgaccagagcagagcgcagcgctgcatgcccgagttcgtt
aacgccgctttcaacgtcacggtggtggcgaccaacacctgcggcaacccgccggaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccgg
gacccccggaaccaccacagcgccgtttacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcgggcatccagtacccgaactccatcaacctc
accctgcacctcggaaaggccttcgacatcacttacgtccgcctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggaccagcgagggcggcccctgggtgccctac
cagtactacagcggctcctgcgagaagacgtaccagaaggcgagccgaggcttcatccgc
acgggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggcggcaacgtggccttctccacgctggagggacgacccagcgcctacaacttcgac
cacagccccgtcctgcaggactgggtgaccgctactgacatcagagtgaccctgaacagg
ctcaacacattcggagacgaagttttcaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaacggccatgccagtgagtgt
gtgaagaacagcagaggacggctggtgtgtaactgcaaacacaacaccgagggcgacgac
tgcaatgtctgcaaaccgttctacaacgaccggccctggaggagagcgacgtccgacaac
gcccacgagtgtctggcctgtaactgtaacgggaagagctccgagtgttacttcgatact
gagctgtaccgggccacgggtcacggaggtcactgcaggaactgcgccgacaacaccgac
ggccccaactgtgagcgttgcctcgacaactactacagagaccagagcggcagccgctgc
ctgccctgcggctgcaacagcatcggctcggagtctcctcagtgcgacaacagaggagtg
tgtgtgtgtaaaccaggagtgaccggagagaagtgtgaccgctgccagcagggataccac
agtctgacggaggccggctgcaggccttgctcctgctcaccctccggcagcactcaggag
tgtgatgtcaataccggacagtgtcgctgcaaagacaacgtggagggtttcaactgtgac
aggtgtaaactgggctacttcaacctggaccccaacaaccctcagggctgcaccccctgc
ttctgcttccagcactcgtccgtgtgcaacagcgccgagggcttcagcgtccactccatc
agctcctccttctacagagatgacgagcagtggagcgctcagcagcgtgacggctccagc
gtctccgtgcgttggtcgcccagcggacaggaaatctccctcatctcagacgactacttc
cccatgtacttcgtcgctccagagaagtttttggggaaccagatgctgagttacggacag
aacctgagtctgagtttccgggtcgaccggcgggacacgcggctgtcggccgaggatctg
gttctagagggagctggcctgagggtggccgtccccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgactacccctgg
aggccgaccatcagccactcagacttccagaaactcctccacaacctgaccgccatcaag
atccgcggcacctacagcgagaggagtgctggttaccttgacgacgtgtccttggtgacg
gcgaggcggggcccaggtgtcccggcccgctgggtggagcagtgcacctgtcctcagggt
taccaggggcaacactgtgagcagtgcactctgggataccgccgtgctcgccccgagctc
ggagccttcagcccctgtgagccctgcaactgtaacgggcacagcgacgcctgcaaccct
gacacaggagcgtgcgactgtcagcacaacacggccggtttgagctgtgagcgctgtaag
gacggtttctacggcgacgcttcccgggggacgtcaggtgactgtcagccctgtccctgc
ccggccggagccacctgcgctgtcgtccccaaaaccagagaggtggtctgcaccaactgt
cccaccggaaccacaggtaagcgctgcgagctgtgtgacgacggtttcttcggcgacccg
ctgggtcagggcgggccggtccgaacctgccgtgcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgcgagaccggcgagtgcctcaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggagggtttctacggcaacgccctggcctcc
aaccccgccgacaagtgcaaaccctgctcctgctctccggccggcaccgtgggccgacag
accagctgctctcaggtcaccggtcagtgtcagtgtcttcccaacgtcgccgagcgtgac
tgcagcgcctgccagcccggcttcttcaacctgctcagcggcaacggctgcgaacggtgc
aactgtaatcctattggctccaccaacggtcagtgtgacatcactaccggacagtgcgag
tgtcagcccggcgtcaccggcctgcactgcgagcgctgcgaggtcaacttcttcggcttc
ggctcgtccggctgcaaaccctgcgactgcgaccccgagggctcccagtcgggtcagtgc
aaggaggacggccgctgcgtgtgccggcccggcttcgtcggcgctcggtgtgacatgtgt
gaggagaactacttctataaccgctcggcgccgggctgccagcagtgtccctcctgttac
agtctggtcagagacaaggtgaaccagcagaggcagaagcttcatgacctgcagactctg
atcgataacctcggctcgggcgaggggacggtcagcgataaggccttcgaggatcgtctg
aaggaggccgagcgagccatcatggagctgctggaggaggctcaggccagcaaagacgta
gacaaaggcctcctggaccgcctgaacaacatcaacaacactctgaccactcagtggaac
cggctgcagaacatccgcaacacggtggacgacaccggcactcaggccgaccgcgcccgc
aacagagtccgtgacgccgaggacctgatcgcccgcgcccggcaggagctggacaaggcc
aaggacgccatcggcaaagtggatattaaaccacccagcggggccggagatcccaacaac
atgacgctgctggctgaggaggcgcgcaaactcgccgacaagcacaaaatggacgccgac
cagattgtgaagatcgccaaagacgccaacgacacatcgaccaaagcgtacaacctgctg
atgaagactctggacggagagggcaagacgagtcaggagatcgacgagctcaacaagaag
tacaacgaggcgaaggagctggcgaagaatctggagaaacaggccaacaaggttcaggcc
gaggctgaagacgccggaaataaagctctgaagatcttcgccaacctcaccagtctgccg
ccgttcgacaccaaggcgctggaggacgaagccggtaagatcaagaaggaagcgtccgac
ctcgacaagctcatcgataagacggagaaggagtacaacgacctcagagacgacctgaag
gccaaagagctggaagtccgcaagctgctggagaaaggcaaaagcgagcagcagaccgca
gatcagctgttggctcgagccgacgctgccaaagctcaggctgaggaggcggcgaagaag
ggacagtccaccttcagagaggctgagagcatcctgaacgacctcagagacttcgacaaa
cgagtcaacgacaacaagactgctgctgaagacgccttgaagaagatccccgccatcaac
gccaccattatggctgccaaggagaagaccaaacaggccgaggcggcgctcggcaacgct
gccagcgacgcccgagaggccaagaacaaggcggaggaggcggagaggattgctagcaac
gtgcagaagggctcagcgaagaccaaggaggacgcagagaaggccttccaggacaccgac
aagctggacaaagaggtcaacgacatgatggaccagctgagcgccgcagagcaggacctg
gccaagaagaaggccgaggccgaccaggacatgatgatggcgggaatggcgtcagataat
gctaaagaggcggaggacaacgcccgcaaggccaagagcgccgtcaaggcagtcctgagc
accatcacctccctgctggatcaactgggaaacatcgacaaggtggacctgagcagactg
aaccagatcgatgagtcgctgaagagggccaagggcaagatggccaacagcgatctggac
aagaagctggctgagctgaacgaagtggcgcggactcagggcgagatgatcgacgactac
gaccggcagatccgcgagatccgcgccgacatcagcaacctcaacgacatcaagaacacg
ttacccgaaggctgcttcaacacggcgtctatggagaggccttaa
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