Thunnus thynnus (Atlantic bluefin tuna): 137194817
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Entry
137194817 CDS
T11154
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137194817 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137194817 (wdr33)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137194817 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
ASA1
ANAPC4_WD40
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
137194817
NCBI-ProteinID:
XP_067463078
LinkDB
All DBs
Position
12:complement(33531664..33563010)
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AA seq
1165 aa
AA seq
DB search
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNSLASIPGMGIPEQLKAAMEQEQNSKEAAPEEMSIPGLDWGMDEV
MGKDAKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPGGDLKDRKVEQKVDMKKKTQAEI
EQEMAALQYTNPMLLEQMKMDRMGSDGNMGPPQGQGPMPPFPGPGGPGGPGGPMPPGQQG
FPPNMPPQQMPNSMGPPMGPGGMQPPFMPPGQMGPPSGPQSHQGPPQGMMGPPDMQRHPG
PPRNMGPQGPHGMGPGPRGMQGPPGGMMGPPPRGMGPRDPQGPPPQGGMMPPQGNMMGPQ
GPMQGGMMGPPPRTHGNMPNNYGMGNMQGPPGGMHGPPGNMQGPPGNMQGHPGNMQGPPG
NMQGPHGNMQGPHGNMQGPHGNMQGPPSNMQGPHGNMQGPQGNMQGPPGNMQGPHGNMQG
PQGNMQGPPGNMQGPHGNMQGPPYLQHQGQNSGPMMHGMGPQGPNNKGDPRGPPPNHHMG
PPDRQGPGGPGGPDQGSGPYWGDNQQGRRGPQDFDGGQDFHSRGEESWRPGPGYQGGGGG
GHRGGGGHRGGGGGNGGNWGPEDRFPRDGGDFRGRRDDRFRGGGPGRPGGRGYPDEYGGQ
EEGFDGPDEMSRGWDSGGRGRPPPRGGGPPRGGGHDGYRDVQQMHDGSSPAGRERSSSLQ
GMDMASLPPRKRPWQDGPGTGDPRERESPGADGGRPPQRDDGGYGPSGRGGRGGWGPGGG
PGPGPAPRRGGPAPRGAPRGGGRGR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatatcggctcgccgcagcggttcttccacatgccgcgcttccagcaccag
gcgccgcggcaggtgttctacaagaggccggacttcgctcagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggccgtcaaccgcaaaaccatcgactacaac
ccctccgtcatcagatacctggagaaccgtctgtggcagcgagaccatcgagacttcaga
gccatccagccggacgcaggatgttacaacgacctcgttcctccgattggcatgttgaac
aacccgatgaacgccgtcaccaccaagttcgtccgaacgtccaccaacaaagtcaagtgt
cctgtgttcgtcatcaggtggactcctgaaggtcgtcgtctggtcactggagcctccagt
ggagagttcactctgtggaacggactcaccttcaactttgagaccattttacaggcccat
gacagtccggtgcgggctatgacctggtctcataacgacatgtggatgctgacggcggac
cacggcggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagtttttctccgacagataataaattcgccacctgc
tcagacgacggcaccgtccggatctgggacttcctgcgctgccacgaggagcggatcctc
agaggtcacggtgctgatgtaaagtgtgtcgactggcatccaactaaaggtctggtcgtg
tccggcagcaaagacagtcaacagccaatcaaattctgggacccgaagaccggacagagt
ctggcaacactacacgcccataagaacacggtgatggaggttaagtggaacctgaacggt
aattggctgctgacggcgtcacgtgaccacctgtgtaaactgtttgacatcaggaacctg
aaggaggagctgcaggtgttcagaggacacaagaaggaggccacagcggtggcgtggcat
cctgtccacgagggtctattcgccagcggaggctccgatggttctctgctcttctggcac
acaggagtggagaaggaggttggagggatggagatggctcatgaggggatgatctggagt
ctggcctggcacccgctgggtcacatcctctgctccggctccaacgaccacaccagtaaa
ttctggaccaggaatcgtccgggtgataagatgagggaccgctacaacctgaacctgctg
ccggggatgtcagaggacggcgtggagtacgatgacgtggagcccaacagtctggcctcc
atccccgggatggggatccccgagcagctgaaggcggccatggagcaggagcagaacagt
aaagaggcggctcctgaggagatgtccattcccggtctggattggggcatggacgaggtc
atgggtaaagacgccaagaaggtcccacagaagaaagtgccgtacgccaaaccgatccca
gcacagttccagcaggcctgggcggagaacaaagtacccatgatgccccctggtggagat
ttgaaagaccggaaggtggagcagaaagtggacatgaagaagaaaactcaggcggagatc
gagcaggagatggcagctctgcagtacaccaaccccatgctgctggagcagatgaagatg
gacaggatgggttcagacgggaacatgggccccccacagggacaaggtcctatgcccccc
ttccccggccctggaggccccgggggtcctggaggccccatgccccctggccagcagggt
tttcccccaaacatgcctcctcagcagatgcccaacagcatggggccccccatgggccct
ggaggcatgcagcctcccttcatgccccctggacagatggggcctccctctggaccccag
tctcaccaggggccccctcagggcatgatgggaccaccagacatgcagagacatcctggc
cctcccaggaacatgggcccccaagggcctcacggcatgggtcctggacccagagggatg
cagggcccccctggtgggatgatgggaccccctcctcgaggaatgggccccagggatcct
caggggcctccacctcaggggggcatgatgccacctcaagggaacatgatgggcccccag
ggtcctatgcagggtgggatgatggggcccccacccaggacacatggcaacatgccaaat
aactatgggatgggcaacatgcaggggcccccaggagggatgcacggacctccaggaaac
atgcaggggcccccaggtaacatgcaaggacacccagggaacatgcaggggccccctggt
aacatgcaaggaccccatggaaacatgcagggaccccatggaaacatgcagggtccccat
ggaaacatgcaggggcctcctagtaacatgcaaggaccccatggaaacatgcaggggccc
caaggtaacatgcagggacccccaggaaacatgcaaggaccccatggaaacatgcagggg
cctcaaggtaacatgcagggacccccaggaaacatgcaaggaccccatggaaacatgcag
gggcccccatacctgcagcaccagggccagaactcggggccaatgatgcatgggatgggg
ccacaggggcccaacaacaaaggagaccctcgggggccgccgcccaaccaccacatgggc
ccccctgatcgccagggccctggagggcctggaggaccagaccagggctcgggaccttac
tggggagacaaccagcaaggtcgacgtgggccgcaggattttgacggaggccaggacttt
cacagcagaggagaggagagctggagacctggacccggctaccaggggggaggaggaggg
ggccacagggggggaggagggcaccgaggtggaggaggagggaacggagggaactggggc
cctgaggacaggttccccagagacggaggagacttcagaggacggagagacgacaggttt
agaggaggaggccccggccggcccggaggtcgaggttaccctgacgagtacggtggccag
gaagagggcttcgacggcccagacgagatgagtcgaggctgggacagcggaggtcgaggg
aggccgccgccgcggggaggaggaccccccagaggaggaggtcacgacggttatcgggac
gttcagcagatgcatgatgggtcgtccccggcgggccgtgagcgctcctcctccctgcag
ggcatggacatggcgtctctgcccccccgtaagcgtccgtggcaggacggtccgggaacc
ggagacccccgagagcgcgagtcccccggcgctgacggaggtcggcctcctcagagggac
gacggcggttacggtccgtccggacgcggcggacggggcggctggggtcccggaggagga
ccgggaccgggacccgcccccaggagaggaggacctgcacccagaggagcaccgaggggg
ggcggccggggccggtag
DBGET
integrated database retrieval system
