KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137195135
Entry
137195135         CDS       T11154                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04140  Autophagy - animal
tty04148  Efferocytosis
tty05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tty00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    137195135 (vps11)
   04148 Efferocytosis
    137195135 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    137195135 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tty04131]
    137195135 (vps11)
Membrane trafficking [BR:tty04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    137195135 (vps11)
   Hops complex
    137195135 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin zf-C3HC4_2 Beta-prop_WDR3_1st zf-rbx1 Beta-prop_WDR36-Utp21_1st zf-C3H2C3 zf-RING_2 zf-C3HC4 zf-RING_5 TPR_GEMI5 ADIP zf-ANAPC11 Beta-prop_EML_2 Rab11-FIP3 zf_RING_Vps8_fungal zf-RING-like TSGP1 CC_Bre1 Kbp-5 ToxA_N
Other DBs
NCBI-GeneID: 137195135
NCBI-ProteinID: XP_067463367
LinkDB
Position
13:1804632..1814470
AA seq 926 aa
MAAFLQWRKFVFFDKDTVKDPVDNGKNFALPSGISACDSGRGHIVLGDMDGKIWLLTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTIPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGTKLLAHWHRGYLFLLINDAKSPNKTAFGSRESSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
SYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDSAEKDSQERSRVNKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSPQGVYDTLLELRLQDWAHEQDPERKKILQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggcagcgttcctacagtggaggaaatttgtcttctttgataaagacacggtgaaggat
cctgtggataatgggaaaaactttgctcttccaagcgggatatcggcttgtgactccggg
cggggtcatattgttcttggagatatggatggcaagatctggcttttgacacgctccctg
cagttgacatcttttcaggcctacaagttgcgggtaacacacctctaccagctgaagcag
cacagcatccttgtatcagtggggcaggatgaacatggaataaaccctctagtgaaggtc
tggaacttggacaagagagacagtggaaatcctctctgcactaggatttttccagcaatt
cctggcaacaaaccgactgaagtgtcttgcctcagtgtacatgagaacctcaacttcatg
gccattggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagagatcgt
cacagtaaaactttgactctgcacgaggggaccatccctgtcacaggcctcgccttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaagtccattgctacacc
ctgtccatcaaggagtatcccaaagtagagctggatacacacggctgtgcgctgcgctgc
tcctccctcgcagatccctcccaagattcccagttcattgtggctggagatgaatgtgtg
tacctgtaccagcctgatgaacgagggccctgcttcgcctttgatggaacaaagcttttg
gcccactggcatcgcggttatctgttcttactgattaatgatgcaaagtcacccaacaag
acagcgtttggtagcagggagagctctccatcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcttttgatgatgtcattgatgtggtggca
gagtggggttccttctacatcctgaccagagatgggaaaatgtttgttcttcaggagaaa
gacacgcagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggactgtcggagatcttcagacagtacggt
gatcacctctaccttaagggagaccatgacggtgccatccaacagtacattcgcaccatt
gggaaactggagccatcttacgtcatcaggaagtttctggatgcgcagaggatccacaac
ctgacagcgtatctgcaagccctgcacaggcagtcgctggccaacgcagaccacaccaca
ctgctgctgaactgttacaccaagctgaaggacagctccaagctggaagagttcattaag
agcagtgaaagtgaggtccactttgatgttgagattgccatcaaggttcttcggcaggca
agctaccacagccacgctgtcttcctggctgagaagcacatgcaccatgagtggtacctg
aagatccaactggaagacctcaagaactaccaggaagggctgcgttacattggacgtctg
ccttttgaacaagctgagagcaacatgaaacgttacggcaagaccctgatgcaccacgtt
cctgaaggtaccacactgctgctgaagggcttatgcaccaactaccaacccagtggagac
tctgctgaaaaagacagccaggagaggagtcgggtcaataaggccaactctgaggaattc
atcccaatttttgccaacaaccctcgggagctgaaagccttcttggagcacatgatcgag
gtagacccccgttctccacagggtgtttatgacacactactggagctccgactgcaagac
tgggcacacgaacaggaccctgagagaaaaaagatcctgcagggggaagctgtgtcgctg
ttgaggagtgacaacactgtgtttgataaggccctggtcctctgccagatgcacaatttc
aaagaaggtgttctctatctttatgagaagggcaaactgtaccagcagattatgcactac
cacatgcagaatgaggaatacggaaaagtggtagaagcctgcaagcgctatggggatcaa
gagggttgcctttgggagcaggcgctgggatactttgccagaaaagaagaagactgcaag
gcctacatcagtgaggtcctacatcacattgaccaaaacaacctgatgcctccattactt
gtggtgcagacactggcacacaactcgacggccactctctccgtcatcaaggactacctc
atcaacaagttgcagagggagagccagcagatcgaggatgatgaacgcaaaatccgccag
taccgcgaagaaaccgctcacctccggtccgagatccaagagcttaaaacgagtgccaag
atattccagaagaccaaatgtaacatgtgcaacagccccctggagctgccatctgttcat
ttcctgtgcagccactccttccaccaacactgcttcgaaagctacgctgagagtgaggct
gagtgcccaacttgcactccagagaaccgcaaagtcatggacatgttgcgtgcgcaggac
cagaaacgtgatctgcatgaccacttcaacagacagttacggagctctaatgatggtttc
tcagttgtggccgactattttggtcgaggagtgtttaacaaactaactctggtcaccgac
ccacctggcagcaaaactgttgggagtctagaagtcaacctgcaaagagaccttctcatc
cacaccaagaggaactgctag

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