Thunnus thynnus (Atlantic bluefin tuna): 137195245
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Entry
137195245 CDS
T11154
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04142
Lysosome
tty04144
Endocytosis
tty05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137195245 (cltca)
04142 Lysosome
137195245 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137195245 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137195245 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137195245 (cltca)
Membrane trafficking [BR:
tty04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
137195245 (cltca)
Exosome [BR:
tty04147
]
Exosomal proteins
Proteins found in most exosomes
137195245 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
137195245
NCBI-ProteinID:
XP_067463550
LinkDB
All DBs
Position
13:complement(5967005..6000933)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQE
DKKECFAACLFTCYDLLRPDVVLETTWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
ETSESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQPYGYGYQAPAGYAQPAAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaatctggggatc
aatccggccaacataggcttcagcaccctaaccatggagtcggataagttcatctgtatc
cgggagaaggttggcgagcagactcaggtggtgatcattgacatggctgaccccaataca
cctattcgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaggtcatt
gcactaaaagccgccaaaactcttcagatcttcaacattgagatgaagagcaagatgaag
gcacacaccatgacggatgatgttaccttctggaagtggatctcccttaacacagttgca
cttgtgactgacaatgctgtctaccactggagcatggagggtgactcacagcctgtgaaa
gtctttgaccgccactccagcctggcaggctgccagattatcaactaccgcactgacgcc
aagcagaaatggctcctgctcatcggtatctcagcccagcaaaatcgggtggtgggagcc
atgcagctgtactctgttgacagaaaggtttctcagcccatcgaaggccatgccgccagc
tttgcccagttcaagatggagggaaatacagaggaatcgactctgttctgctttgctgtc
agaggccaggctggagggaagttgcacatcattgaagtggggaccccaccaactggcaac
cagccatttccaaagaaagcagtggatgttttctttcctccagaagcccagaatgacttc
cctgtggcaatgcagataagctctaagcaggatgtggttttccttattaccaaatatggc
tacatccacttgtatgacttggagacaggcacgtgcatctacatgaaccgcatcagcgga
gagaccatctttgtcaccgctccacatgaggccacttcaggcatcatcggggtcaacagg
aagggacaggtgctgtcagtctgtgtggaagaggaaaacatcatcccttacataactaac
gtgctgcagaatccagatctggctctccgtttagctgtccgcaacaacctcgctggcgct
gaagagctctttgcgcgcaagttcaacaacctgtttgcagccggcaactactctgaggct
gccaaggtggctgccaatgcaccaaagggtatcctgcgaaccccagacaccatccgtcgc
tttcagagcgttcccactcagccaggccagacctcccccttgctgcagtactttggcatc
ctgttggaccagggccagctcaacaagtttgaatccctggaactttgcaggcctgtcctc
cagcagggacgaaagcagcttttggagaagtggctgaaggaagacaagttggaatgctct
gaggaactgggtgacctggtgaaggcagtggatcccaccttggccctaagtgtctacctg
agggccaacgtccccaacaaggtcatccagtgctttgcagagactggtcagttccccaag
attgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctgaggaat
gtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgcttgtccaggacgaa
gagccactggctgacattacacagattgtggatgtgttcatggagtacaacctgatccag
cagtgcacctcattcctcctggacgctctgaagaacaacagaccttcagagggaccactg
cagactcgcctactggagatgaacctcatgcatgctccacaggttgctgatgctatcctg
ggcaaccaaatgttcaccaactacgaccgcgcccacatcgcccaactgtgtgagaaggct
ggactcctgcaaagggctctggagcattacactgacttgtatgacatcaagcgtgctgtg
gtgcacacacacctcctcaacccagagtggctggtgaacttctttggctcattgtcggtg
gaggactctctggagtgcctcagggccatgctgtcagccaacatccgccagaacctgcag
atctgtgtccaggtggcctctaagtaccacgagcagctcaccacacaggctctcactgag
ctctttgagtcattcaagagctttgaaggtctgttctacttcctcggctctatcgtgaac
ttcagtcaggaccctgaagtccacttcaaatacatccaggcagcctgcaagacgggccag
atcaaagaggtggagaggatctgtagagagagcaactgctacgaccctgagcgtgtcaag
aacttcctgaaggaagccaaactcactgaccagctgccactcatcatcgtctgcgaccgc
tttgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaagtacatt
gagatctacgttcagaaggtgaatcctagccgtctgcctgtggtggttggtggtctctta
gatgtggactgctcagaggatgtcatcaagagcctgatcctggttgtcaggggacagttc
tctactgatgaactggtcgctgaggtggaaaagaggaacagactgaagctcctgctgccc
tggctggagtctcgtatccatgaaggctgtgaggagcctgctacccataatgccctggcc
aagatctacattgacagcaacaacaaccctgaacgcttcctcagggaaaatccctactat
gacagccgtgtggtgggaaagtactgcgagaagagagacccgcacctggcctgtgtggcc
tatgagagaggacagtgtgaccaggagttgatcaatgtctgcaatgagaactccctgttc
aagagcttgtctcgctacctggtccgtcgcaaagatcctgagctgtgggccagtgtgctg
ctggagagcaaccccttcagacgtccacttattgaccaggtggtgcagacagcactgtca
gaaacccaggacccagaggaggtatcagtcacagtcaaggccttcatgaccgccgacctg
cccaacgagctcattgagctgctggagaagattgtgttggacaactctgtcttcagtgaa
cacagaaatctgcagaacctgctgatcctgactgcaatcaaagctgaccgcacccgtgtg
atggaatacatcaacagactagacaactacgacgctcccgatatcgcaaacatcgccatc
agcaatgagctctttgaggaagccttcgccatctttaagaagtttgatgtcaacacctct
gctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgcagag
cgttgcaatgagccggctgtgtggagccagctggcaaaggctcagttacagaagggcctg
gtcaaggaggccatcgactcctacatcaaagccgatgacccctctgcatacatggaggtg
gtacaggctgctgataagagcggaaactgggaggacttggtcaaattccttcagatggct
cgtaagaaggcccgtgagtcctacgtggagacagagctgatctttgccttggccaaaacc
aatcgcctggctgaactggaggagttcatcaacggacctaacaatgctcacatccagcag
gttggtgaccgctgctatgacgagaaaatgtatgatgctgctaagctgctatacaacaac
gtctccaactttggccgtctggcttcaactcttgtacacctcggggagtaccaggctgct
gtggacggcgcccgcaaggccaatagcacccgcacctggaaggaggtgtgctttgcctgc
gtggatggaaaggaattcagactggcccagatgtgtggcctccacatcgtggtgcacgcc
gacgagctggaagagctcatcaactactaccaggaccgtggctactttgaggagctgatc
accatgctggaggcagccctgggcctggagcgcgctcacatggggatgttcactgagctg
gccatcctctactccaagttcaagccccagaagatgagggagcatctggagctcttctgg
tccagagttaatatcccgaaggtcctgagagcagcagagcaggctcacctgtgggccgag
ctggtgttcctgtatgacaagtacgaagagtacgacaacgctatcatcaccatgatgaac
caccccacagacgcctggaaggagggacagttcaaagacatcatcaccaaggtggccaac
gtggaactgtactacaaagccgtccagttctatttggagttcaagcccttgttactgaat
gatctgctcatagtgctttcccccagactggaccactcccgtgctgtcaacttcttcagc
aaggtgaaacagctgccactggtcaagccctacctgcgctcagtacagaaccacaacaac
aagtcagtcaacgaagcacttaacaacctcttcatcacagaggaggactatcaggcactg
aggacatcaatagatgcctacgacaacttcgacaacatctcactggcccagcgtttggag
aagcacgagctgatcgagttcaggagaattgctgcctacctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctgtgcaagaaggacaagctctacaaggatgccatgcagtac
gcgtcagagtccaaggacacagagctggcagaggagctgctgtcctggttcctacaggag
gacaagaaggagtgttttgccgcctgcttgttcacctgctatgacctgctgcggcctgac
gtggtgctggagaccacctggaggcacaacatcatggacttttctatgccatatttcatt
caggtcatgagggagtacctcagcaaggttgatgcaattaaggaaaaggtagataaactt
gaaacctcagagtccctaaggaaagaggaggaacaggcgacagagacgcaacccatcgtc
tatggcacaccccagctgatgctgacagcaggccccagcgtacctgtggcccctcagcaa
ccttatggctacggctaccaggcgcctgcaggatacgctcagccagctgctcagccaggc
tttggctacggcatgtaa
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integrated database retrieval system
