Thunnus thynnus (Atlantic bluefin tuna): 137195363
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Entry
137195363 CDS
T11154
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137195363
Cell adhesion molecules [BR:
tty04515
]
Immunoglobulin superfamily
ROBO family
137195363
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
137195363
NCBI-ProteinID:
XP_067463740
LinkDB
All DBs
Position
13:complement(8902442..9010912)
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AA seq
1576 aa
AA seq
DB search
MLASMTFLLISLLCVNQLQHGHTMDISSDTDKHRGNREVITQTPASEPATEQDNSLGYKG
SRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVD
VMVAVGEPAVLECQPPRGHPEPTISWRKDGSNLDDRDERITIRSGKLMITNTRKSDAGKY
ICVGTNMVGERESEIAELTVLERPTFVKRPSSVVVLADESVEFHCAVQGDPVPTVRWRKD
DSDLPKGRFEILEDHTLIVRQVTSSDEGSYTCVVENMVGKSEASATLTVHVPPAFAVRPR
NQVVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTITDV
QRSDGGFYSCQALNIAGSVITKALLEVTDTGSDHPPPVIRQGPINQTVPVDSTVVLGCQT
AGTPPPTVHWKKDGAVVSPVDSRMSIADTGSLEIRYTKLGDTGFYSCIASSPNGEASWTS
YLQVEEFGVVVQSSHPTDPNLVPSAPSKPEVTDISRTSVTLSWKSNPNAGATPTSYLIEA
FSYTLGSRWVTLAEHVKTQSFVLRNLKPATVYLFMVRAVNAYGLSDPSPISDAVRTQEST
STMQGVDHRHIQRELGDVVIHLHTPTVLSSSAVRVQWMVEQQSPYIQGYKVLYRASADHG
QPEGQWSVLEVHTPQEDGVVIGQLKRGSIYEFKVRPFFDEFQGADSDVKVVRTLEEAPSR
APQGVTVTKSDANGTAILVTWKPPPGPEEAGVIQEYKIWCLGNESRYHVNQSVDGSTFSV
LIPSLAPGIRYSVEVAASNGAGPGVKSDVTFFQLDSAGQMMDISEERDTLSQISDVVRQP
AFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESVCN
AGRPGLLSMGEPLNQLWLPENWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADCIAN
YGNHPENKQLGSETPIYSDVNLSNKLNEIKTFNNSNLCYASPGGDSAATYEPIPYATTQL
IQASIKNKAATGGAIVEPLDMPCWKQPPNPPPIPKEMAAQMQYNIMEQNMLNKDHLQGGE
GMIHPKTIPYNQTRDHSTGGSHHSSDRGSNSTSGSQNQRKGPRAPKTPKHNAVSWGEALS
PPHANAWNCDEYSLPMEKSFDPEERIEGCPTPPVRGAASSATEVPYSHPPTTTPQGDLSS
GFHPHPLSPTHTYSSIPLCMDTDGQEEDDEEAEEEIDTELAESHYSQHHNRQKHKHQLHH
PSPHKLLLHGLEQTPASSTGDLDRSVTGSMVNSWGSASEDNISSGRSSIVSTSEGSFFTD
GDFNQAVASSRDIVGLRMCRYPEESGRRHQRPSSPMSTDSNMSPAITHKRPRRHKQNQTG
QQGYQPKDVFNDDTCMPLNFTSQMSHGDYKVRGATLPRMGSGEGRGRRGSTGTHRVREGT
LEQRESQDKHKTPLGGKGGSKSRQHSEFGDILLYSRPSFPSGHAQREPDDPKSSSFISCG
DSRTKQGGQVAPTGQL
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatctatgacatttcttctcatcagcctgctctgtgtcaaccagctgcagcat
ggccacaccatggacatttcatcagacacagataaacacagagggaaccgtgaggtcatc
actcaaacacctgcatctgagcctgcaacagaacaagacaacagccttggatacaaaggg
tctcgtctgcggcaggaagacttccctccccgcattgtggagcacccttctgacctcatt
gtgtccaagggggaaccagccactctcaactgtaaggcagagggccgtccaacccccaca
gtggaatggtacaaagatggggagcgtgttgagacggaccgtgacaacccccgttcccac
cgtatgctgctgcccagcgggtcccttttctttctgcgcatcgtccatggacgacggagc
aagcccgacgacggcagctatgtgtgtgtggcccgaaactatctgggccaggcgatcagt
cacaacgcatccctggaagtagcaattttacgtgatgacttcagacagaacccagtagac
gttatggttgcagtgggtgagcctgcagtgctggagtgccaaccaccccgtgggcaccct
gaacccacaatctcctggaggaaagatggttccaacttagatgacagagatgaacgcatc
acaattcgcagtggcaagctgatgatcaccaacacccggaagagtgatgcagggaaatac
atctgtgttggaactaacatggtcggagaaagggagagtgagatcgctgaactcactgtg
ctagagcgcccaacctttgtgaagcggcccagcagtgtggtggtgttggcagatgagagc
gtggagttccactgtgcggttcaaggagaccctgttcccactgtccgctggaggaaagat
gattctgacctgcctaagggcagatttgaaatcctagaagaccataccttgattgttcgc
caagtgacctcttcagatgagggctcctatacgtgtgtggtggagaacatggttgggaag
tctgaagcatccgccacgctcactgtgcacgtgcctccagcatttgctgtacgccccagg
aaccaggtggtgtcagtgggaaggacggtcaccttccaatgtgaggccaccggtaaccca
cagcccgctatcttctggcagagggagggcagtgagagtctcctgttctcttaccagcca
ccacagcccttcagccgtctgtctgtctcccagatgggcagtttgaccattactgatgtt
cagcgctctgatggcggcttctacagctgccaggctctcaacattgccggcagtgttatt
accaaagcactgctggaggttacagacactgggtcagaccaccctcctcctgtgattaga
cagggcccaatcaatcagactgttcccgtggacagcactgtggtgttgggttgccaaact
gctggcactccacctcctacagtccactggaagaaggatggtgcggtggtgtctccagtg
gactcccgtatgtccatagcagacacaggatcactggagattcgctacaccaagctggga
gatacaggcttctactcttgtatagcttctagtccgaatggagaggcttcctggacgtca
tacttacaagtcgaagagtttggagttgttgtgcagtcaagtcatcctacagaccctaac
ctggtgcccagtgctccatctaaacctgaagtgactgacatctctcgtacctctgtcact
ctgtcatggaaatccaaccccaatgcaggagcaacacctacatcttacctaattgaggca
ttcagttatacgctgggcagcagatgggtgaccctagctgagcatgtgaaaacacagagc
tttgtcctgaggaacctgaagcctgcaactgtctacctctttatggtcagagcagtgaat
gcttatggcctcagtgaccccagcccaatctctgatgctgtcagaacacaggagagcact
tccaccatgcagggagtggatcatcgtcacatccagagggagctgggagatgtggtgatc
cacctgcacacaccaactgtcctgtcgtcttctgctgtcagggtgcagtggatggtcgag
cagcagtctccatacatccagggttacaaggtgttgtacagggcgtctgctgatcatggc
cagcctgaggggcagtggagtgtcctggaggtacacaccccacaggaggacggggtggtt
atcggtcagctcaagaggggatctatctacgagttcaaagtgcgccccttctttgatgaa
ttccagggagctgacagtgatgtgaaggtggtcaggacattggaagaagcccctagtaga
gcaccccagggtgttacagtgacaaagagtgatgccaatgggactgccatcctcgttact
tggaaaccacctccaggaccggaagaggctggagtcattcaagagtacaaaatctggtgc
ctgggtaatgagagtcggtatcatgtgaaccaatcggttgatggctccaccttctctgtg
ctcattcccagtctggcaccaggaattcgctacagtgtagaggttgcggctagcaacggt
gctggacctggggtcaagagtgatgtcactttctttcaattagactctgcaggccagatg
atggatatcagtgaggaaagagacacgttgtctcagatctcagatgtagtgaggcagccg
gcatttattgctggcattggcgccacctgctggttggtcctcatgattttcagtgtgtgg
ctctaccgtcaccgcaagaagagaagtggcctcagcagcacatacactggcatccgcaag
gtcccgtcattcaccttcacacctacagttgcatatcaaagaggagaatctgtgtgcaat
gctggcagacctggccttctcagcatgggggaacctctgaaccagctgtggctgccagaa
aattggccaaatgcatgtgccaatcacaaggactgtagtatcaactgctgtaataatggc
aatggcaccagtgacagtaacatgacaacatacagccgaccagctgactgcattgctaac
tacggaaaccatccagaaaacaaacagcttggttctgagacgcccatttacagtgatgtg
aacctctccaacaagctgaatgagattaaaacgttcaacaactccaacttgtgctatgca
agtccaggaggagattcagcagccacatatgaacccatcccatatgccaccacacagctc
attcaggcaagcattaagaataaggcagccaccggtggtgctattgtagagcctctggac
atgccctgctggaagcagcctcccaacccgcctccaataccaaaagagatggcagcacag
atgcagtacaacataatggagcaaaacatgctaaataaagatcatctgcaaggaggtgaa
ggtatgatccatcctaaaactatcccctacaaccagacccgtgatcacagcactggaggc
tcacaccacagctcagacagaggcagcaacagcacctcaggcagtcaaaatcaaaggaag
ggaccgcgggccccgaagacaccaaaacataatgcagtgagctggggagaagctctgtct
cctcctcatgctaatgcctggaactgtgatgagtatagcctacccatggaaaagagtttt
gatccagaggagagaatagagggctgtcctactcctccagttagaggagcagcctcatct
gctactgaagtgccctatagtcacccacctaccacaacaccacagggagacctgagcagt
ggcttccacccgcaccctctttccccaacacacacctacagctccatacctctctgcatg
gatactgatggacaggaagaggatgatgaggaggcagaggaggagatagacacagagctt
gcagaaagtcactacagccaacaccacaaccggcagaagcacaaacaccagctgcaccac
ccctctccacacaagctgctcctccacgggctggagcagaccccagcctccagcactggg
gatctggacagatcagtcacagggtccatggttaacagctggggctcagcatctgaggac
aacatctcatcaggcaggtccagtattgtcagcacctcagaaggatccttctttacagac
ggcgatttcaaccaggcagtagcatcttcgcgggatattgtaggcctgcgcatgtgtaga
tacccagaggagtcaggccggcggcatcagcgacccagcagccccatgtccacagacagc
aacatgagtcctgcaataacacataaaaggccgaggaggcataaacagaaccagactggt
caacagggctaccaacccaaagacgtcttcaatgatgacacctgcatgcctctgaatttc
accagccagatgtcccatggtgactataaagtgaggggggccacgctgcctcggatgggc
tctggggagggccggggtcgacgaggcagcactgggactcacagggtcagggaaggtaca
cttgagcagagagagagccaggacaagcacaagactccactaggaggaaaaggaggcagc
aaaagcagacagcactcagaatttggggacatccttctgtatagtcgtccctctttccca
tcaggtcatgctcagagggagcctgatgatcccaaatcatccagctttatatcatgtgga
gactcacggaccaaacagggaggacaggtggcacctacaggccagctgtag
DBGET
integrated database retrieval system
