Thunnus thynnus (Atlantic bluefin tuna): 137195420
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Entry
137195420 CDS
T11154
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137195420 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
137195420 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137195420 (thoc2)
03041 Spliceosome [BR:
tty03041
]
137195420 (thoc2)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137195420 (thoc2)
Spliceosome [BR:
tty03041
]
Complex C
Other components
EJC/TREX
137195420 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137195420 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
137195420
NCBI-ProteinID:
XP_067463866
LinkDB
All DBs
Position
13:10417140..10443697
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKDLTEKTDHGSEIRDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHIVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLVKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPPDVAIVEEHKRDISE
AKQIARKLVMVVLPSEKNEDKEKEKEKEEEKNEQPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYKRAGVPKGARGCVMHPLRNKRAPRPAESFE
DLRRDTFSMLCYLGPHLSHDPILFAKIVRLGKAFMKEYQSDGRPDVKDKLDTLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
QKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYDREVNKL
KAQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVSRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECGNYPGFLTIFRATGFDGGNKVD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATNTGKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKNSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAAAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNNNEPKESTSKHHVNYNSVARSKSRERELEKKDSEN
TQGRSKEKKEEKDRKDRKRDHAVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKGESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggataaaaaactgggaaaaatcaggaaaacac
gaattcgtacaactctgcaaagaccttacagagaaaacagatcatggaagtgagattaga
gatatacaggcggccttatacgagctctgctggcaagttgtacaggggaacctgaagttg
gatcttgtcgccagcgtccttggggacatgatggaactcagagatgacatgccatcaatt
ttagcagatgtgttcagtatacttgatttagagactggtgcactggaagaaaaaaacaaa
cgtgaccattacacacaattggtgggagcatgtttgttttttgttccagaggccatcttg
aaagagcggctggatccagaaacccttgaatcccttggacttataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagttcaac
ttgctaagggaggagaatgagggctatgccaaactaatcactgagcttggccaagacctg
tcgggcaacatcaccagccacattgtactggagagcatcaagtccctcataggatgtttc
aacttagaccctaatcgtgttttggacataatcctggaggtgtatgagagtcgatccgac
caagatgagttcttcctgtccctcgtcaagtcctacatgtgtgagccgctcactctctgc
cacatcctgggatttaaattcaaattctaccaggaacccaatgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatcttatgccaccagatgtcgccattgtagaggaacacaaacgagatatctcagag
gccaagcagattgctcgcaagctggtcatggttgtgctaccttcagagaaaaatgaagac
aaagaaaaggagaaggaaaaggaggaagagaagaatgagcagccacctgataaccagaag
cttggtctgttggaagcactgcttaggattggagactggcaccatgcccagagtattatg
gaccagatgccttccttctatgcgacttctcacaaggccattgcactggcactctgccag
cttgtgcacctgactgtggagcctctctacaaaagggctggcgtcccgaaaggagcaagg
ggatgtgtgatgcatccactgaggaacaagcgggcccctaggcctgcagagagctttgaa
gacttgcgcagggacacattcagcatgctctgttacctgggccctcacctctcccacgac
cccatcctctttgccaagattgtgcgtctgggcaaggcattcatgaaagagtaccaaagt
gatggcagacctgatgtcaaagacaaactggatacgctgttgagttgtttcctgagcatt
gcagaccaagtgctactcccttctctctctctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctcttcaaactctttccctaccagcacaggtaccggttatatggacaa
tggaagaacgagacatattccagccatccacttttggttaaagtcaaagcccagactgtg
gagagggcgaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctgggagg
cagattggcaagctgagccatagcaaccccaccatcctttttgattatatgctgtctcag
atccagtggtacgacaacctcattgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcttattgcatcattgaggctctggccaatcccgagaaggag
aagatgaagcatgacgacaccaccatctcctcatggcttcagagccttgcaagtctgtgt
ggagctgtgttcagaaaatacccaattgagttggctggccttcttcagtatgtcaccaac
cagctaaaagcaggaaagagttttgacctgttgatcctgaaagaagtggtgcagaaaatg
gctggcatcgagatcacagatgagatgacgtcagagcagttagaggccatgacaggaggg
gagcaactcaaagctgagggtggctactttggccagatcaggaacactaagaagtcatca
cagcgtctgaaggatgcattgctggatcacgaattggccctgccactgtgtctactcatg
gcccagcaacgaaatggcgtggtattcttagaaggcggagagaaacatcttaaactggtt
ggccacctctatgaccagtgtcatgatacattggtgcagtttggtggctttctggcctcc
aacctcagcacagaagactacatcaaacgagttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgcattcttcctgtctcggccaatgtacgcccatcagatt
ttgtccaagtacgatgagctgaagaaagcagagaaaggcaaccggcagcagcaaaaggta
cagaagtatgtggcagcctgcgaacaggtaatgacaccagtgcacgaggctgtggtgtcc
ctccatccagccagggtctgggatgacctccggcctcagttctatgccaccttctggtcc
ctgaccatgtacgacctggctgtacctcatgctgcctacgaccgtgaggtcaacaagctc
aaggcccagatcaaggccatcgaggagaaccctgagatacctttgaataagaaaaagaag
gagaaagaacgctgcactgccctgcaggaaaaactgcaggaggaggagaagaagcagctg
gagcacgtctcaagggtcttacaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacaaagttcctgcagctctgtctattccctcgctgt
atcttctcttccatcgacgccgtgtactgcgcccgcttcgttgagctggtccaccagcag
aagacccccaacttctgcaccctcctgtgctatgacagggtgttttctgccatcatttac
acggtggccagctgtacagagaacgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgctggcacagcgaccgtgcaatctatgagaaggagtgtggcaat
tacccaggcttcctgaccatcttcagagccacaggcttcgatggagggaacaaagtggat
cagctagattatgagaactttaggcatgtggtgcacaaatggcactacatgctgactaaa
gcttcagttcactgcctggagaccggagactacacccacatccggaacatcctcatcgtg
cttaccaagatcctaccctgctatcccaaagtcctgaacctgggccaagcgctggagtgc
cgtgtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccataaggagcagccagcgcgcagtgccacccctgccaatcagcagaacggccccggc
agcacaggcaagcctgccaccaacacgggcaagacagaggaggggacatcagaggatggc
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcctgagacaaaggcggagaaccgtcgggagaagcagagagatgagagagcg
gggaaggaggagcgggcggcacgtgagggtaaggagaagacacccaaggcagacagggag
aaagtgaaggccgaggagaagaacagcaaagacgacaaggccaaagctggcaacggggag
cccatggagccgtccagggagcgcgacgccatcaaggagtccaagagcaaggagaaaggc
gacaggagtgctgcggccgggtccctcaagtcaccagttcccagatctgagtcagccgaa
tccgagagggatcacaaaagacgaaagctcgacagccactcttctccgtcccactcctcg
tctgttaaggacaataacaacgaacccaaggagtccacgtccaagcaccacgtcaactac
aattcagttgcccggtccaagagcagagagagggagctggagaagaaagattcagagaac
acgcaaggccgatccaaagagaagaaggaagaaaaggatcggaaagacaggaaaagagac
catgctgtcaacgaccgtgagacgagccaagaatccaaacgcagaaaggacgagaacgga
accaattcctccaaaaacagcaagagcacgagtccttcctgtgactccccgctgtcagct
gaaaaagagaagagcaaaagatccaaatcttccagtaaagagaagggcgagtctgtgaaa
cctgaacgaacttcctctggaggaaaaaaggagtccagacacgataaagagaaatctgaa
aagaaagagaagagggacagcagcggaggaaaggaagagaaaaagcatcataaatcctcc
gacaagcacagataa
DBGET
integrated database retrieval system
