Thunnus thynnus (Atlantic bluefin tuna): 137195594
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Entry
137195594 CDS
T11154
Symbol
nectin1a
Name
(RefSeq) nectin cell adhesion molecule 1a
KO
K06081
poliovirus receptor-related protein 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03266
Virion - Herpesvirus
tty04514
Cell adhesion molecule (CAM) interaction
tty04517
IgSF CAM signaling
tty04520
Adherens junction
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
137195594 (nectin1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137195594 (nectin1a)
04517 IgSF CAM signaling
137195594 (nectin1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137195594 (nectin1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137195594 (nectin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137195594 (nectin1a)
04090 CD molecules [BR:
tty04090
]
137195594 (nectin1a)
Cell adhesion molecules [BR:
tty04515
]
Immunoglobulin superfamily
Nectin family
137195594 (nectin1a)
CD molecules [BR:
tty04090
]
Proteins
137195594 (nectin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_2
Ig_3
I-set
ig
Ig_PVRIG
Ig_6
Motif
Other DBs
NCBI-GeneID:
137195594
NCBI-ProteinID:
XP_067464195
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All DBs
Position
13:complement(13285464..13302633)
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AA seq
502 aa
AA seq
DB search
MENSRFWIFLITTCVISGVNGQSVEMDDGKSGYVGSKVDLRCRFINSSPPVKISQVTWQK
LVNGTKQNVAIANPSLGVSVAPPYRDRVTFKNAAVRRRTPTLEDTTITFSSLRLSDESTY
ICEYTTFPAGNRENTVNLTVYVRPTTQMSLSTPTLVARASNLKTPVATCVSANGKPPGTI
RWETRVPGEVTNREYRNSDGTFTVQSDYILVPSRDTHKETLTCVTTYNEEVYTDSVTLDI
QYEPDVSVDGFDGNWYLNRENVQLSCQADANPAVSLYQWRVVNGSIPSNAEIRDNVLTFK
GPVTYDLQGIYVCDATNSIGTRSGSVEISIIEKPLPQIATGDVISVVALLLAAGVLMGIT
ITVLVLKIRSRKSESSNDSPSRKLSQPIRKRPADDIQHSARFYEELPNTADYVSYRLACN
KEDYPEPYSPPINPPLSFLPQHPYHSSQPTTATNSSNTTNTSKNTFSPPSHTTAIFKYPS
VPGLSSPPPGVAAYTFPKEQYV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactccagattttggatattcctgataacaacttgtgttatttcaggagtgaat
ggccaatctgtggaaatggatgatgggaagtcagggtatgtgggttcaaaggtggatctc
cgctgtcggttcatcaacagctccccgcccgtcaagatctcccaggtaacatggcagaaa
ttggtgaacggaacaaagcagaatgtggcgatcgccaatccctccctgggtgtgtctgtg
gccccgccatacagggaccgtgtcaccttcaagaatgcagcagtgaggcgccgaacgccg
actcttgaagacaccaccatcaccttctcctcgctccgcctctctgacgagtccacctac
atctgtgaatataccacattccccgcagggaaccgagagaacactgtaaacctcaccgtc
tacgttcgcccgacaacccagatgagtctgtccacgccaacactggtggctcgtgcatcc
aacctgaaaacaccggtggctacttgtgtctctgccaatggaaaaccacctggtacaatc
aggtgggagacaagggtgccaggagaagtgaccaatcgggagtacagaaactcagacggg
acattcaccgttcagagtgactatattttggtgcccagcagagacacacacaaggagacg
ttaacctgtgtcactacctacaatgaggaggtctacactgacagcgtcaccctcgatatt
cagtacgagccagatgtttcagtggatggctttgacggaaactggtatctgaacagagag
aacgtccagctgagctgccaagctgatgcaaacccagccgtctctctgtatcagtggaga
gtggtaaatggatccataccaagcaatgctgagatccgagacaacgttcttacatttaaa
gggccagtcacatacgacctgcaaggtatctatgtgtgtgatgcaaccaacagcatcggc
acgagatcaggctccgtggaaatcagcattatagaaaagccactaccgcagatcgcaaca
ggtgatgtcatcagcgtagtcgccttattactggctgctggagtgctcatgggcataacc
atcacagtcctggtgctcaaaataagaagtagaaaaagcgaatcctcaaatgactctccg
tccagaaaactgtcccagccgataaggaaaagaccagcagatgatatccagcattcagca
cggttttacgaagagcttcctaacacagcagactacgtgagctacagactggcctgtaac
aaggaggactacccagagccctactcccctcccatcaacccccctctctcatttctgccc
cagcacccctaccactcctcacaaccaaccactgcgaccaacagcagcaacaccaccaac
acgtcaaaaaacaccttctcccctccctcacacaccacagccatctttaagtacccatcc
gtaccgggcctgtcttctcctcctccaggggtggcggcgtacactttccccaaagagcag
tacgtctga
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