Thunnus thynnus (Atlantic bluefin tuna): 137195936
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Entry
137195936 CDS
T11154
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137195936 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137195936 (rabgef1)
Membrane trafficking [BR:
tty04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137195936 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
137195936 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
RecG_N
Motif
Other DBs
NCBI-GeneID:
137195936
NCBI-ProteinID:
XP_067464765
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Position
13:complement(22395882..22408585)
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AA seq
513 aa
AA seq
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MSQRTERRGIHVDQSDLLCKKGCGYYGNSAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGAQAQSHSQSTAPQPNQGHASLGPFSKFEEKKTNEKTRKVTTVKKFF
SPSSRTASKKETQEGKTPSPSISRHASFDTEQVSKDFVDFLKNLQKPGREIHKQCRAFIV
NMSSKKDLSADELSECVQDFYQNMADRLMSHFKGSSESVEQVMDQVEKYIMTRLYKSVFC
PETTDDEKKDLATQNRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRVPR
DKLACITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNPS
RLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRFSSSEGEWPHDGP
APGATPTNPVLAQLNHNLELLSDLSSRQESLMEAAQSLQADLISWPKSVEREVQDVLEKY
PLEIASRTVSAIDANNLDNDHLPPPLTPQVFAG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcgacgtgggatacatgtggaccagtcagacctgctgtgcaaa
aagggatgcggttactatggtaactcagcatggcagggcctgtgctcgaagtgctggagg
gaggagtaccagcgggtacgccagaaacagatccaggacgactgggccttggctgagaag
ttacagcgagaggaggaggcagcgtatgccagtagtcacggagctcaggcccagtctcac
tcccagtccacagcaccacaaccgaaccaagggcatgcttctctaggacccttctccaag
ttcgaggagaagaaaaccaatgaaaagacacggaaagtgaccaccgttaaaaagttcttc
agcccttcgtcacgtacagcttccaagaaagaaacccaagagggcaaaacacccagtccg
tccattagccgccacgccagcttcgatacagaacaagtgtccaaggactttgtggacttc
ttgaagaacctccagaagcccggccgggagatccataagcagtgccgagcttttattgtg
aacatgtccagcaagaaggacctcagtgctgatgaactgtcagagtgcgtgcaggatttc
tatcagaacatggctgaccgcttgatgagtcactttaaaggatcttcggagtctgtggag
caggtgatggaccaagtggaaaagtacatcatgactcgtctgtataagagtgtattctgt
ccagaaaccactgatgatgagaagaaggatttggccacacagaacaggatcagggcttta
cactgggtgaccatccagatgctgtgtgtgtccatggatgaagaaatccctgaagtctct
gagaatgtggtcaaagcaataacagatatcattgagatggactctaagcgggttcctcgg
gacaaactagcgtgcatcacacgctgcagtaaacacatcttcagtgccatcaggatcacc
aagaacgagccggcctcagctgacgacttcctccctgcactcatttacatcgtgctcaag
gctaaccctccacggcttcagtccaacatccagtatatcacccgcttctgtaaccccagc
aggctgatgactggagaggatggatactacttcaccaacctgtgctgcgcagcggccttc
atcgagaagttggatgctcagtctctcaacctttccccggaggaatttgagcgctacatg
tcaggccaagcctcgccacgattcagcagctcagagggtgagtggccccacgatggcccg
gcacctggcgcaactcccaccaaccctgtcctggctcagctcaatcacaacctggagctg
ctgtcggacctcagcagccggcaggagtcgctgatggaggctgcgcagagcctgcaggcc
gacctcatctcctggcccaagagtgtagagcgggaggtgcaggacgtcctggagaaatac
cctctggagattgcatcacgcacagtttctgccattgatgccaacaacctggacaacgac
cacctgccaccacccctcacaccccaggtgtttgctgggtag
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