Thunnus thynnus (Atlantic bluefin tuna): 137195997
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Entry
137195997 CDS
T11154
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tty04514
Cell adhesion molecule (CAM) interaction
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
137195997 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137195997 (ncam1a)
04517 IgSF CAM signaling
137195997 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137195997 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137195997 (ncam1a)
04090 CD molecules [BR:
tty04090
]
137195997 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137195997 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tty00537
]
137195997 (ncam1a)
04091 Lectins [BR:
tty04091
]
137195997 (ncam1a)
Membrane trafficking [BR:
tty04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
137195997 (ncam1a)
Cell adhesion molecules [BR:
tty04515
]
Immunoglobulin superfamily
NCAM1/2
137195997 (ncam1a)
CD molecules [BR:
tty04090
]
Proteins
137195997 (ncam1a)
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
137195997 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tty00537
]
Others
137195997 (ncam1a)
Lectins [BR:
tty04091
]
I-type lectins (Siglecs)
137195997 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_PDGFR_d4
Fn3_ROS1
V-set_CD47
Ig_C17orf99
C2-set_2
F22D3_4_N
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
137195997
NCBI-ProteinID:
XP_067464848
LinkDB
All DBs
Position
13:complement(23787011..24066884)
Genome browser
AA seq
865 aa
AA seq
DB search
MVHIRDLIWGLLFFGCAAAIQVQITPSQGEISVGESKFFLCEVVGDVKDIDWYAPSGEKI
LPNRQDIFVSRNDEATSTLTIYHANVDSAGIYKCVAKNGDKEAQATVQVKIFQKITFQSA
PSPQEFNEGDDADIICDVVSSPPPTIIWKHRGSKIQVAKDVRFRIPENGHLQIRGIKKTD
EGMYNCEARVMARGEIDFKMIKVVVNVLPTIRARQSDVNATADVGSSALLACDADGFPEP
IVTWAHNNIVLETGDKYSLNEDGSELVIKDVKKVDEGDYTCIAKNKAGEKTEEVSLNVFV
QPKITYLNNQTASEFDEQVTLTCEASGDPTPTISWSFENRVFTEGEQASWTRPDTYESLD
RNIVVRSHARVSSLTLKNVQFTYAGQYLCTASNSIGQDNHHMYLEVHYAPKILGSVAVYT
WEGNPANISCEVEAHPGAAVVWFRDGLQLPTANTTNIKIYNTPTNSYLEVTPNSQNDFGS
YNCTASNMMGTESKEFLLIPAEVPSSPEILQVDPFSSTAVVEFEEPESFGGVPIIKYRVE
WRVPSQDWTGKEYNVEDYMTKITITGLKPETTYEVKMSATNGKGEGESSPPSVFKTEPVL
SSETPPPIAATSMALREPSAPKLEVKVQNRGNSLKVNWIKQDDGGSPIKHYLVRYKAKHV
SDWKPEIRLPHGSEYVVLSGLDWNTEYEVRVVAENQQGKSEPGILSFRTATEPTTIPGAV
DSGTGLGTGAIVGILIVVFFLLLVGIDVTCYFLNKCGLLMCIAVNFCGKTGPGAKSKDIE
EGKAAFTKDESKEPIVEVRTEEEHTPNQEGGGPTEPNETTPLTEPDGKAVKDDNTKGETE
VKNATTEVKTVPNEAPQTNGNESKA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggttcatataagggacctcatctggggattgctgttctttggctgtgcagctgccatc
caggtgcaaatcactccatcacaaggggagatcagcgtaggagagtccaaatttttcctc
tgcgaagtggtgggagatgtgaaggacatagactggtacgcccccagtggagagaagatc
ctccccaacaggcaagatatttttgtgagccgcaacgatgaagccacgtcgaccctcacc
atatatcacgccaacgtggacagcgctggcatctacaagtgtgtggcaaagaatggggac
aaggaggcccaggccacggtccaagtgaagattttccaaaagatcaccttccagagtgct
cccagtccacaggagttcaatgagggtgatgatgctgacataatctgcgatgtggtcagt
tcaccaccacccaccatcatttggaagcataggggctccaagatccaggttgccaaagat
gtgcgattcaggatcccagaaaatggccacctgcagatccgtggcatcaagaagacagat
gagggcatgtacaactgtgaggctcgtgtcatggcgaggggagaaattgactttaagatg
atcaaggttgttgttaacgtactccccaccatccgtgccaggcagtcagatgtcaacgct
acagcagacgttggtagctcagctttgttggcctgtgatgcagatggcttccctgaaccc
atcgtcacctgggcacataacaacattgtccttgaaacgggtgataagtacagcctgaat
gaggatggttcagaattggtaataaaagatgtcaagaaagtggatgaaggagattacact
tgcattgccaagaacaaggcaggagagaaaaccgaggaagtcagcctgaacgtgtttgtg
caacccaagattacctacttgaataaccagactgcctcagagtttgacgaacaagtcacc
ctgacctgtgaggcctccggcgacccgacacccactatctcctggagttttgaaaacaga
gtgttcactgaaggagagcaggcttcttggacgcgaccagacacatatgagagccttgat
agaaatattgtggtacgaagccacgcacgggtgtcctctctcaccttgaaaaacgtccag
ttcacgtacgccggccagtatctctgcactgcgagcaactccatcggtcaagacaaccat
cacatgtacctggaagtccactatgctccaaagattctcggttcagtggcagtgtacacg
tgggagggaaacccagccaacatcagctgtgaggtggaagctcaccctggagccgctgtg
gtttggttcagagacggtcttcagctgcccactgccaacaccaccaacatcaagatctac
aacacgccaaccaacagctacctggaggttacccccaactctcaaaatgactttggaagc
tacaactgcacagcatccaatatgatgggtacagagtccaaggagttccttcttatccca
gcagaggtgccatcatcgccagaaattctacaagtggaccctttctccagcacagcagtg
gtagagtttgaggagccggagtccttcggtggtgtgcccattatcaagtacagagtagaa
tggcgtgtgcccagccaggactggactggcaaggagtacaatgttgaagactacatgacc
aaaatcaccatcactggcctgaaaccggagaccacctacgaggtcaagatgtctgccacc
aatggcaaaggcgaaggcgagagcagcccgcctagtgttttcaagaccgagccagtcctt
tcatcagagacaccaccccctatcgctgccaccagtatggcccttagggaaccaagtgcc
cccaaactagaggtcaaggtccaaaacaggggcaattctcttaaggtcaactggatcaag
caggatgatggcggttcccccattaaacattacctggtcagatacaaggctaagcatgta
tccgactggaaaccggagatccgccttcctcatggcagtgagtatgtggttttgagcggc
ctggactggaatacagagtatgaggttcgtgtggtggcagagaatcagcagggcaagtct
gagccaggaatcctctcctttcgaacagctacagagcccactaccatcccaggcgccgtg
gacagtggcacaggcttgggtaccggagccatcgtaggcatcctcatcgtcgtctttttc
ctactgttggtgggcattgacgtcacctgctacttcctcaacaagtgtggactcctcatg
tgcatcgctgtcaacttctgtgggaagactggaccaggtgccaagagcaaggacatcgag
gagggcaaggcagcattcacgaaagatgagtctaaggagcccattgtcgaggtgagaacg
gaggaagaacacaccccaaaccaagaaggagggggtcccactgagcccaatgagaccacg
cctttgacagaacctgacggtaaggctgtgaaggatgataacactaaaggcgagacggag
gtgaagaatgccacaaccgaggtgaagacagttcccaacgaggctccccagacgaacggc
aacgaaagtaaagcgtaa
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