KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137196074
Entry
137196074         CDS       T11154                                 
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:tty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tty03019]
    137196074 (gemin5)
   03041 Spliceosome [BR:tty03041]
    137196074 (gemin5)
Messenger RNA biogenesis [BR:tty03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     137196074 (gemin5)
   mRNA cycle factors
    P-body specific factors
     137196074 (gemin5)
Spliceosome [BR:tty03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    137196074 (gemin5)
SSDB
Motif
Pfam: TPR_GEMI5 GEMI5_RBS WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_1st WDR55 Beta-prop_EML Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_HPS5 PAC11 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 ASA1 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_WDR41 WD_LRWD1 TPR_IF140-IFT172
Other DBs
NCBI-GeneID: 137196074
NCBI-ProteinID: XP_067464984
LinkDB
Position
13:complement(28013495..28033529)
AA seq 1467 aa
MHERSLPASPNWYCSRCSDVNSSGLLGVGAKNIIYLIDVSASSCRVAGELVGHKGLVSGF
AFCQHAGQSHICVSSSNDGNVLFWDSDNKTLIREHAAHQSPVSAVHWSPVDKNLVVSGDE
KGIVVCHWYHTGDTASFFPEPRTIFCLTCSPHTWSCVAVGYKDGMIVLIDVSKKGEVMHR
LRGHDDEIHSLAWSPLANENTLYSRPEDTEATNGITAGEEKGCYLASGSKDQTVRIWSTA
KGKGVMTMKLPYLKKRGSAVDPGVKERLWLNVHWPKGRATQLVSSCFSGELVMWDLTKTG
KQRWTLFGTSSEGQNHSRIVFNMSSVHLQDDRELLLSTSMDRDIKCWDLASLDCCWTLPT
LGGFVYALTFSPVGAGCLALGVGDNMIRVWNTLTTQNQYDTRSFWQGIKSKVTALAWHPK
REGSLSFGTDDGKVGVYDVFSNKPPQISSSYHRKTVYTLAWGPPVPPMSFGAAGGKPSYS
LYSCAGEGVILQHDPSKLSGEASDIDRLIKDTNNIKHKLSPHTDLSWKPDGKVVAIGNED
GCIDVYEAPSLKLLCSIQQHHKIINTLRWHHDHSSPTELHCLLASGSSNAVVYVHDLRSV
IENPPESPAMLTEPYRRLCGHTAKITGMAWSPHHDARLVTVSYDGTAQVWDVLQEAPVSN
YRGHVGYLLCVDWSPVDPDVIWTGGKDFTLQEWRVSKQEFTNPPKGKKMLDLKEKMKANP
KQKKKNKKAAGATGAPPPPETNGQPVTGGEKAATGQEPSDEDEEDEVSSTNSSLPPSGTF
ETQRKSSTAAKSKDKPDLNLLKRKKPRSMLPISTSMDHRPKEELLQDCITLASVKHSDAP
PAGCVPGQGQHIHLGLFSDRQALYRMFEAEEESHVEAGHFESVVYLRLWSGDLEGALQLA
TEKGELNDHLLSVAPMAGFEVWNRTVEAFVKQLCLQEQYLKAASHLLSINKLYEAVDLLR
SHKLYREAIALVKARLPADEPVLKELYTCWASTLEKDGHFSAAAKCYVAAGASFDAAKVI
ARKNDVSSLRTAASLARISGEVMLAQSLAMRCAKDLAAAQDWVGAQEVLSSQESLLVHRL
HLCVAELLSVMLAEVVPQSCISSHPWTSPGEQHVSIQDRVRDVWEEQFGVSLKSAGHRSA
RALLQELKSAESPTPTANVPLRQVLLYSSLHLTRSVLSWLSDDDGQLIKELWQAVTWLRD
AGHFSVSAELCRLLFPEGDVTVCSRKHLKTLHHTEEEEAKAAADSLQAFVHLHRLYERWW
SRSAYNQKVQNGCSPSAADSSPGDETKDKVVNGGSSESGQSSICSANGRFGELGFDASLL
LSEPHAACQATQRSVREIQERLAAMVLKHGRAQGGQLDTGEKQADSPAAGESSDSQGPSD
AGQRPDDQETLLSLSVKMSDYQKQLADLPETIKMYPHPDVVECCLVLLHFSKSTPSVSES
LQQETKHLLRKYGTSPSVLKASQRFLT
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgcacgagaggtcgctccccgcctctcctaactggtactgctcgcgctgcagtgacgtc
aacagcagcggtttattgggcgtcggagccaaaaacatcatctacctgattgatgtatct
gcgtcctcctgcagagtcgcaggtgagctggtcggccataaaggcttagtgtcaggcttt
gcattctgtcagcatgcaggccagagtcacatctgtgtcagctcctccaatgatgggaat
gttctcttctgggactcagacaacaagactcttattagagagcatgcagctcatcagagc
cccgtctcagccgtgcactggtcccccgtggataaaaacctggtggtttcaggggatgag
aagggcatcgtggtctgtcactggtaccacacaggagacaccgccagcttcttccccgag
cccaggaccatcttctgcctcacctgctccccccacacctggagctgtgtggctgtgggg
tacaaagacgggatgatcgtgctgattgatgtgagtaaaaaaggcgaggtgatgcaccgt
ctccgtggacacgatgatgagatccactcgctggcgtggtcgccgctggccaatgagaac
accctgtacagcagacccgaggacactgaagcaaccaatggcataactgcaggagaggag
aagggctgctatcttgcctctgggagcaaagaccagacagtgaggatctggagcacagca
aagggcaaaggcgtgatgaccatgaagctgccatatctgaagaaaagaggctctgcagtc
gaccccggggtcaaagagagactctggctcaacgtccactggccgaagggacgagcgaca
cagctcgtgtccagctgcttcagtggtgagttggtgatgtgggacttgaccaagacaggg
aagcagaggtggactctgttcgggacgtcttcagagggtcagaaccacagcaggatcgtc
ttcaacatgagttcagttcacctgcaggacgacagagagctgctcctcagcacctccatg
gacagagacattaaatgctgggacctggcctctctggactgctgctggactctgcctacc
ctgggtggtttcgtctacgccctgacgttctcccccgtcggcgcagggtgtctggcgctg
ggtgtcggtgacaacatgatccgggtgtggaacacactgaccacccagaaccagtacgac
acaaggtccttctggcagggcatcaaatccaaggtcacagcgctagcgtggcaccctaaa
agagaaggatccttgtcttttggaacagatgatggtaaagtcggtgtctatgatgtcttc
tcaaacaagcctcctcaaatatcgagctcatatcacagaaaaacagtgtacacattggcc
tggggacccccagtacccccgatgtcatttggtgcagcaggaggaaagccgtcctacagc
ttgtatagctgcgccggcgaaggcgtcatcctgcagcacgatccatctaaactgagcgga
gaggcatcggatatcgacagactgatcaaagacaccaataacatcaagcacaagctgtct
ccacacaccgacctcagctggaagccagatgggaaagtggttgccatcggcaacgaggac
gggtgcatcgatgtgtacgaggctcccagtctgaagctgctgtgcagcatccagcagcac
cacaagatcatcaacacgctgcgatggcatcacgaccacagctctcccacagagctgcac
tgcctcctggcctcaggctccagcaacgccgtcgtctacgtgcacgaccttcgctcggtg
atagagaatcctccagagagccctgcgatgttgacggagccgtatcgcaggctgtgtggt
catacggctaaaatcactggcatggcttggagtccacaccatgacgcccggctggtcaca
gtctcgtacgatggcacagcccaggtgtgggatgtgctgcaggaggcgcccgtctcaaac
taccggggtcacgtcggttacctgttatgtgtcgactggtcgcccgtcgacccggatgtg
atctggaccggaggaaaggacttcactctgcaggagtggagagtctccaaacaagagttt
acaaatccacctaaagggaaaaagatgctcgacctgaaggagaaaatgaaggccaatccc
aaacagaagaagaagaacaagaaggcggcgggggccactggagcgccgccaccgccggag
actaacggacagccagttacaggaggagagaaggcggcgacgggacaggagccatctgat
gaagacgaggaagatgaagtcagctcgacaaacagttctttacctccatcaggcactttt
gagacgcaaagaaaatcctctacagcagcaaagagcaaagacaaaccagacttaaacttg
ctgaagagaaagaagcctcgctccatgctgcccatcagtacgtccatggaccatcgaccc
aaagaggagctgctgcaggactgcatcactctggcctctgtcaaacacagcgacgcgccc
cctgcaggctgtgtcccaggccaaggacagcacatccatctgggtctcttctctgacaga
caggctctgtatcgcatgtttgaagcagaagaggagagtcacgtggaggcgggtcacttt
gagtctgttgtgtacctgcggctgtggagcggagacctggagggggccctgcagctcgcc
acagagaaaggagagctgaatgaccacctgctctctgtcgctcccatggctgggtttgag
gtgtggaaccggacggtggaggcgtttgtcaagcagctgtgtctacaggagcagtacctg
aaggcagcgtcccacctgctgtcaatcaacaagctgtacgaggccgtcgacctgctgcgt
tcacacaagctctacagggaggccatagctctggtcaaagccaggctgccagcagacgaa
ccggtcctgaaggagctgtacacctgctgggcctccacgctggagaaggacggacatttc
tccgcagccgctaaatgttatgtagccgctggcgccagcttcgacgcagccaaagtcatc
gccaggaagaatgatgtttcctcactgaggacggcggccagtctggcgaggatctcaggg
gaggtcatgctggctcagtcgctggcgatgcgttgcgctaaagatctggccgctgctcag
gactgggtcggagcccaggaggtcctgagctcacaggagagcctgctggtccacaggctt
catctctgcgtcgctgagctgctgtctgtgatgttggctgaagtcgtacctcagtcctgc
atctccagtcacccgtggacatcgccaggcgagcaacacgtcagcatccaggaccgagtg
agagacgtgtgggaagagcagtttggcgtttcactaaagtcggcaggtcatcgcagcgcc
agagcgctcctgcaggagctgaagtccgcggagagtccgacacccaccgccaacgttccc
ctcagacaggtgctgctgtattcatccctccatctgacccgctccgtgttgagctggtta
tcggacgatgatggacagctgataaaggagctgtggcaggcggtaacttggctcagagac
gccggacactttagtgtgtctgcagagctctgcaggctgcttttccctgagggtgacgtc
actgtttgttccaggaaacatctgaaaacacttcatcacacagaagaagaagaagccaaa
gctgctgctgacagtctgcaggcttttgttcatcttcaccggctgtatgaacgctggtgg
agccgctcagcttacaaccagaaggtccagaacggatgttctccctcagcagctgactcc
agtcccggagacgaaacgaaggacaaagtggtgaacggaggatcgtcagagtcgggacag
agcagcatctgctcggcgaatgggaggttcggtgaactgggcttcgacgcgtcgctgctt
ctgtctgagcctcacgctgcctgtcaggccactcagaggtccgtgagggagatccaggag
cggctggccgccatggtgctgaagcacggcagagcccagggaggacagctcgacactggg
gagaaacaggctgacagtcccgctgccggagagtcatcagacagccagggaccctccgat
gctggacaacggcctgatgaccaggagactctgctctcattgtccgtcaagatgtccgac
taccagaaacagctggctgacctgcccgaaacgattaagatgtatcctcacccagatgtt
gttgaatgctgcctggtcctcctgcacttcagcaagtctaccccgtctgtctcagagtcc
ctgcaacaggagaccaaacatctgctccgcaaatacggaacaagcccctccgtcctgaaa
gcctcccagcgattcctcacctga

DBGET integrated database retrieval system