Thunnus thynnus (Atlantic bluefin tuna): 137196084
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Entry
137196084 CDS
T11154
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04137
Mitophagy - animal
tty04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137196084 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137196084 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137196084 (vcp)
03009 Ribosome biogenesis [BR:
tty03009
]
137196084 (vcp)
04131 Membrane trafficking [BR:
tty04131
]
137196084 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137196084 (vcp)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137196084 (vcp)
Ribosome biogenesis [BR:
tty03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
137196084 (vcp)
Membrane trafficking [BR:
tty04131
]
SNARE
SNARE associated proteins
Others
137196084 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137196084 (vcp)
Exosome [BR:
tty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137196084 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
SLFN-g3_helicase
Viral_helicase1
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
137196084
NCBI-ProteinID:
XP_067464999
LinkDB
All DBs
Position
2:complement(20369149..20378097)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGEAKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSATGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggaggggaagcaaaaaatgatgatctagccactgcaattctgaaacagaag
aacagacccaacagactgattgtcgatgaatccatcaatgaagacaacagcgtggtgtct
ctctctcagaccaagatggacgagctgcagctcttccgtggagacacagtgttgatgaag
ggaaagaagagacgggagactgtgtgcatcgtgctatctgatgacacctgttctgatgaa
aaggttcgcatgaacagggtggttcgcaacaatttgagggtccgactgggcgacgtcatc
agcattcagccatgtcctgatgtgaagtatggaaagaggatccacgtccttccaatagat
gacacagtagagggaattactggcaacctgtttgaggtctatctcaagccatacttccta
gaggcttacaggccaatccgcaaaggtgatattttcctggtcagaggaggcatgcgtgcg
gtggagttcaaggtggtggagactgatccctctccctactgcatcgttgctcctgataca
gtcatccactgtgagggagagccaatcaggagagaggatgaggaagagtccctgaacgaa
gtgggttatgatgacattggaggagtgaggaagcagttagctcagatcaaagagatggtg
gagctgcctctcagacaccctgcgctgttcaaggccataggagtcaagccccctcgtgga
atcctgctgtatggaccccctggaactggaaagaccttgattgccagagccgttgccaat
gaaactggagctttcttcttccttattaatggccctgagatcatgagtaagctggcagga
gagagtgagagtaacctgagaaaggcctttgaggaagcagagaaaaatgctcctgccatc
atcttcatcgatgagctggatgcaattgctcctaagagagagaagactcacggagaggtg
gagaggcgcattgtttctcagctgctcactcttatggacggcctgaaacagagagctcat
gtcatcgtcatggctgccaccaacagacccaacagcattgacccagctctgaggagattt
gggcgttttgacagggaggtggacattggcatcccagacgctaccggcagattggagatt
ctccagattcacactaagaacatgaagctggctgatgacgttgacttagaacaggtagcc
aatgagacccatggacacgttggtgcagatctggctgctctctgctctgaggctgccctg
caggctatcaggaagaagatggacctgatcgatcttgaggatgagaccattgatgctgaa
gtcatgaactctcttgccgtcaccatggatgacttcaagtgggccctgagccagagtaac
ccatcagctctcagggagacagttgttgaggttcccaacattacctgggaggacatcgga
ggtctggatgatgtcaagagggagctgcaggagttggtgcagtacccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaaaggtgtgttgttctatggtccccct
ggttgtggtaagactctgctggccaaagccattgccaacgagtgccaggcaaacttcatc
tccatcaaaggacctgagctactcaccatgtggtttggagagtctgaggccaacgtcaga
gagatctttgacaaggctcgtcaagcagccccatgcgttctcttctttgatgagctggac
tccatagccaaggcccgtggcggtaacgtgggagacggcggtggagctgccgaccgtgtc
atcaaccagatcctgaccgagatggacggaatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccatcctgagacctggccgtttggat
cagctcatctacatccccctgcccgacgagaagagcaggatcagcatcctgaaggccaac
ctccgcaagagtcccatcagcaaggatgtggacttggacttcctggctaagatgaccaac
ggcttctctggagctgatcttacagagatctgccagcgggcgtgtaaactggccatcaga
gagagcatcgagaatgagatccgcagagagagggagaggcagaccaacccatcagccatg
gaggtggaagaggacgatcctgtgccagaaatcaggaaggaccactttgaagaggcgatg
cgattcgctcgtcgctccgtcagtgacaatgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggcttcggcagcttcaggtttccctccagcgctacaggtggc
agtggtccaagccatggctcaggaggaactggcagtggtcccgttttcaatgaagataac
gacgatgacctttatggataa
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integrated database retrieval system
