Thunnus thynnus (Atlantic bluefin tuna): 137196137
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Entry
137196137 CDS
T11154
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137196137 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
137196137 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137196137 (thoc5)
03041 Spliceosome [BR:
tty03041
]
137196137 (thoc5)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137196137 (thoc5)
Spliceosome [BR:
tty03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137196137 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137196137
NCBI-ProteinID:
XP_067465064
LinkDB
All DBs
Position
2:complement(20399328..20406920)
Genome browser
AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRNEGGTPEIKRGRGDSEQQDVRVYSEEVELDGRDPEQDYLQYKESC
ESLATLMGEIQELKANGAKEGCAEVERRRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQEAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
VLHLFFYYLMNLNIMTVKTKVSTSTDLSTAISAGDLLKADTLLSCLFTSDQGRETPNPAN
RYQFDKVGIVSFADYVEELGHPYMWVQSLGGLHFPSDASEGVRVGSSLSASHMESTIKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTITQQEYMDLPFIRHV
TDAGLAKETDLYFMAVVERGTARLQAAVVLSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQMSRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggacgccctgaagaagcgaaagtcgaaggtccttcgcaatgaaggaggaacc
ccagagataaagcgaggacgaggagacagcgagcagcaggatgtgcgtgtatatagtgag
gaggtggagcttgacggcagggaccctgagcaggactacctgcagtacaaagagtcatgt
gaaagtctggccacactcatgggtgagatccaggagctcaaagccaatggagccaaggag
gggtgcgctgaggtcgagcggagacgcatgcagagctgcattcacttcatgaatctgaaa
aaactcaaccgtctggctcatatgcgactgaagagaggcagagatcagacacacgaggca
aagcagagagtggacgtgctgcaccttcagttgcagaatcttctgtatgaagttatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggagatagacctt
gtgagtgaggaagagttttaccaggaagcaccgcaggagatttccaggccccacctcacg
aaaaacgatccccaccagctcacactggcacgactagactgggagcttgaacagaggaag
aggttggcagagaaatacaaggagtcacaggccacaaaggagaaaatccagaagagtatt
gaggtgaagaaggaacatctgagaagcttgcagccaggactgaacgccatcatgcaggcc
tctctcccagtgcaggagtatctgtctatgccttttgagcagactcagaaacagacagag
attgcccgacacctgccgcctcccctctatgtcctgtttgttcaagccaatgcctacggt
caggcctgtgacaagaacctgagtgtgtccatcagcggtgatgtggatgaggccaaggct
ctgtccaaacctccagaagattcccaggatgacgagagtgactcagatgcagaggaggag
caagagaaaacgaagaggagaaggccaactacaggcggccagctggacgacaaaagacga
gagatgctgaaaaggcatccgctgtccctctgcttagacctcaagtgtaaagatggcagc
gtcctccatctattcttctactatctgatgaatctgaacattatgacagtgaagaccaag
gtctccacatccacagacctcagcacagccatcagtgcaggggacctgctgaaagcagac
actctcctcagctgtctcttcaccagcgaccagggaagagaaacacccaatccagctaac
cgctatcagtttgataaagtcgggattgtttcctttgctgattatgtggaggagctgggc
catccctacatgtgggttcagagtcttggtggactacattttcccagtgatgcgtcagag
ggtgtgcgtgtgggcagttctctgagcgccagccacatggagagcaccattaagctgctg
aggggacgagtccagtcccgcttggctctgcataaacagtttgcctctttagagcacagc
atcatccctgtctccagcgagtgtcagcatctctttccagccaagatcatctcccgttta
gctcgctggaccaccatcacacagcaggagtacatggatctgccatttatacgtcatgtg
actgatgccggtctggcaaaggagactgatctgtactttatggctgtggtggagagaggc
acagctcgcctccaggctgcggtggtgctgagtccccgctacccagaaatctctcctctt
ttctccctctctctcagctggaagggagagcgcagtggacgcaccgacgacaaccttcga
gccatggagagcgaggtgaacgtgttcaaaaatgaactgcagggaccccgcccaggacac
cagctcctgaccaatcaaatgtcacgcctgtgtgtctgtctggatgtgtatttggagact
gagggacaggatgacagtgtggagggaccgcgggagtttccccgtgaaaagatgtgcctg
cgcactgtcaggggtccaaatcgtctgaagccattcaagtacaaccatcctcagggcttc
ttcagtcatcgttaa
DBGET
integrated database retrieval system
