Thunnus thynnus (Atlantic bluefin tuna): 137196741
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Entry
137196741 CDS
T11154
Symbol
pkd2l1
Name
(RefSeq) polycystin-2-like protein 1
KO
K04990
polycystin 2L1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tty03037
]
137196741 (pkd2l1)
04040 Ion channels [BR:
tty04040
]
137196741 (pkd2l1)
Cilium and associated proteins [BR:
tty03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
137196741 (pkd2l1)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
137196741 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_6
EF-hand_1
DUF6377
EF-hand_7
MCM_C
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
137196741
NCBI-ProteinID:
XP_067465669
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Position
14:complement(7885107..7891708)
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AA seq
812 aa
AA seq
DB search
MKCLNNRADSHLTGQVECELDAMGNGAWVNQGYCASPPPLPRAVSTIYNPQPLFQGSMDS
MYKLDTPSPLPEEPESADQSLVKKRRGCCSFIKGLWGTTLTENTSNNRELFVRTTLRELL
VYLVFLVDICLLTYGMTSSSTYYYTKAMTDLFVNTAGENGVRFQSIGTMADFWSYAQGPL
LNGLYWTKWYNNQSLNSGDQSFIYYENMLLGVPRMRQIKIKNNSCKVHKDFQDEITGCFD
VYNEKKEDDLSFGLINGTAWTYHTEKDIKGSSHWGLLTTYSGAGYYQDLSQTKEESSIKL
TELVDNLWLDRGTRAVFIDFSTYNANINMFCVIRLVVEFPATGGTIPSYQIRTVRLIRYI
TYWDYFILGCEMVFCLFILYYVVEEILELRIHKFAYFKSIWNILDIVVIMLAIVAIIFNI
FRTVKVDNLLGKLLEQPSIYADFEFLAFWQTQYNNMNAVNLFFAWIKVFKYISFNKTMTQ
LSSTLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTEVDSFSTFVKCIFTQFRIILGDFD
YDAIDRANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSSQKDELQITDIIK
QSYMKTFMKLKLKNEKISDVQKALRSGSGEIEFKDFRETLKEMGHADHEISAAFSRFDRD
GNQILDEDEQERMKTELEEKRDALCAELNNLGMNYGKDLLEKPPVTVNDQRNHSSQTSVD
REQFLRLTRQVLHLESSVAGITSRIELIMEKLGLQDKTKGNKTAGKLSVTKNDTDETASD
GSVLLCVDRGTKAEMSSRRPTVRTNSTFDCHM
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcctgaacaaccgggccgacagccacctgactgggcaggtggagtgtgaattg
gacgccatgggcaacggggcctgggtgaaccagggctactgtgcctcccctccacccctg
ccccgagctgtcagcaccatctacaacccacagcccctcttccagggctccatggacagc
atgtacaaactggacacccccagcccattaccagaggaaccagagtctgctgaccaaagc
ctggtgaagaaacgcagaggctgctgctcttttatcaaaggcttgtggggtacaacattg
actgaaaacacctcaaacaacagagaactgtttgtccgaaccacgctacgggagttactg
gtctatctggtgttcctggtggatatatgtctcttgacatacggcatgaccagctcaagc
acctactattacactaaagccatgacggacctgtttgtgaatacagccggtgaaaatggg
gttaggtttcagtccattggcaccatggctgacttctggagttatgcccagggaccatta
ctgaacggtctctactggactaagtggtacaataaccagtccctgaacagtggagaccag
tccttcatctactatgagaacatgctgctgggagtccccaggatgaggcagatcaagatc
aagaacaactcctgcaaggtccacaaagacttccaagatgagatcacaggatgtttcgac
gtctacaatgagaagaaggaagatgatctcagcttcggtctcatcaatggcactgcctgg
acctaccacacagagaaagacatcaaaggttcctctcactggggcttgctgaccacctac
agtggagcaggatactatcaggacctgagtcaaaccaaagaggagagctccatcaaactg
acagaactggtggacaacctttggctcgaccgaggaaccagagcagtcttcattgacttc
tccacttacaacgcaaacatcaacatgttctgtgtcatcaggttggtagttgaattccct
gcaactggcggaacaatcccctcctaccagatacgaacagtcagattgattcgctatatc
acctactgggattacttcatcctcggctgcgaaatggttttctgtttattcattctctat
tatgttgtggaggagattcttgagctgcgaatacacaagtttgcctactttaaaagcatc
tggaatatactggatattgtggtcataatgcttgccattgttgccatcatattcaacatt
ttccgtactgtcaaagtggacaacttgcttggcaaactgctagaacaacctagcatctat
gctgattttgaatttctggcattctggcaaacacaatacaacaacatgaatgcagtgaac
ttgttctttgcatggatcaaggttttcaagtacatcagttttaataagactatgactcag
ctgtcctccacactgggtcgatgtgctaaagatatcttgggatttgccatcatgttcttc
atcgtgttctttgcctacgctcagctcggatatttactctttgggacagaggttgactcc
ttcagcaccttcgtcaagtgcattttcacacagttcaggattattcttggagactttgat
tatgatgccattgaccgtgcaaacagagttcttgggccaatctattttgtcacctatgtg
ttctttgttttctttgttctactgaacatgtttttggccatcataaatgacacatattct
gaggttaaggaggagctctcatcccaaaaagatgagctgcagattactgacatcatcaaa
cagagttacatgaagacattcatgaagttgaaacttaaaaatgagaaaatatcagacgtt
cagaaggctctacggtctggatctggagaaattgaattcaaggacttcagagaaactctg
aaggagatgggacatgctgatcatgaaatttcagcagctttctcgcggtttgatcgtgat
gggaaccaaattctagacgaagacgaacaagagaggatgaaaacagagctggaagaaaag
agggatgctctttgtgccgaactcaacaatcttggaatgaattatgggaaagatttactg
gagaagcctcccgtgaccgtaaatgatcagaggaaccactctagtcaaacctctgtggat
cgggaacagtttctaagactgaccaggcaggttctccaccttgaaagctctgtggcaggc
atcacatccaggattgagttgattatggagaaactgggattacaagacaaaactaaaggg
aacaaaacagcagggaaactatctgtgaccaaaaatgatactgatgaaactgcctcagat
gggagtgtcctgctgtgtgtggacagaggaacaaaggctgagatgtcttcacggagacca
accgttcgtaccaactccacattcgactgtcatatgtga
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