Thunnus thynnus (Atlantic bluefin tuna): 137196880
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Entry
137196880 CDS
T11154
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137196880 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tty03400
]
137196880 (msh6)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137196880 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
137196880
NCBI-ProteinID:
XP_067465926
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All DBs
Position
14:11427625..11435633
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AA seq
1381 aa
AA seq
DB search
MAKQSSLFNFFTKSPPPVSKPKPSPSPVEADLPSSVEKSNSSPKEQAKQAAQQQPTKTNR
VKPKSNSKPAKGGFNKLFGDKTPKTKESSTCSFNAGALVWAKLEGHPWWPCMVVPQPLTG
QQMRGRGRDQRIHVHFFDEPPTRGWVSTKYVREYQGSDSSDAKTGGVFFCGKPVIRRAME
LADGVMFDSPEKRLKMSVCEDPSDEEEDDDEEMELDNSTMTDEEVSDEDEQKNVDVKSSK
ASRRSSRASTEKGNKAKRRRIIVASDSDGSDEEFKPEHAASSSEDEEEEATVNSEEEDEE
STQESEVESPVKPVKRKRPAEKPANKKEKISITPPSAPKRAPAAIAVDTKHRLSAFSAPD
SFESQANGSGTSGSATVWDHEKLEWLQDGRRKDSRRRRQTEDDYDPTTLYVPEDFLNRNT
PGMRRWWQLKSEMFDTVIFYKVGKFYELYHMDAVIGVNEMGLTFMKGSWAHSGFPEIGFG
RFSDVLVQKGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVRREVCRIITRGTQTYSVL
DGAPSESQSKFLLSLKEKAEEESSGCCRTYGVSFVDTSVGYFHVGQFTDDRHCSRLRTLI
AHFAPAEVLFERGNPSVETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEEDYFSET
ADKDQGTGNSFLPPLLKKMTSESDSLCLTPKEGYELALSALGGCIFYLKKCLVDKELLSM
ANFEEYVPVDVEMEKAAGPASFFAQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDT
CSTPFGKRLLKQWLCAPLCNPSSIRDRLDAVDDLMGAQAQASEVSDLLKKLPDLERLLSK
IHSIGTPLKSEDHPDSRAVLYEEVTYSKRKIADFLSTLEGFKTMQEIISVLSPVSAQFQS
RLLSQVVSQKSEKDGLFPDLSSELQRWETAFDHQKARTTGVITPKAGFDPEYDQALTGIK
NCERELQDYLDRQKKRLGCKSMAYWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKGWKR
YVTKETERLFSELQGFEEKRDAALKDCMRRLFYNFDKNYRDWKTGVECMAVLDVLLALSR
YSQGGDGSMTRPQVVLPEHDEQLAPFLDLTGSRHPCVTKTFFGDDFIPNNIYIGCAGSSE
NDEEERQASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLRFTPVDRVFTRLGA
SDRIMAGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKELAEKI
CCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYG
FNAARLASLPEAVIQSGHRKAREFEKSTISLRLFKKLCQFAEDTSLGNTHFASLVQMINT
L
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctctcttttcaattttttcaccaagtctccgccgccggtctccaag
ccgaagcccagtccttctcccgtcgaggcagacctgccttcctcggttgagaagtccaac
tcctctccgaaagagcaagctaagcaggcagcacagcagcaaccgaccaagaccaacaga
gtcaagccgaaaagtaactccaagcctgccaaagggggattcaacaaactattcggcgac
aagacaccaaaaaccaaagaaagctccacatgctccttcaatgctggtgcccttgtgtgg
gcaaaactggaggggcacccttggtggccatgtatggtggtaccccaacctctgactgga
cagcaaatgagaggccgtggtcgggaccaacgcatacatgtccatttcttcgatgaaccc
cccactaggggatgggtcagcaccaaatatgtcagagagtaccaaggctccgacagtagt
gatgctaagactggaggggtgtttttctgtggcaaacctgtaatccgtcgtgcaatggag
ctcgctgacggtgtcatgtttgacagccccgaaaaaagactgaagatgtctgtctgcgag
gatccatctgatgaggaagaggatgatgatgaagaaatggagcttgacaattcaacaatg
actgatgaagaggtcagtgatgaggatgaacagaaaaatgtagatgtgaagtcatctaaa
gccagtcgacgttcatcccgtgcttcaacagaaaagggaaataaggccaagcgccgtcgt
ataattgtagcctcagacagtgatgggtcagatgaggaattcaaaccagaacatgccgca
agcagcagtgaggatgaagaggaggaagcaacggtgaacagtgaagaggaggatgaggag
agcacacaagagtcagaagtagagagccccgttaagcctgtaaagcgcaaacgtcctgca
gaaaagcctgctaacaaaaaagaaaagatatccataaccccgcccagtgcacccaaacga
gctccagcagctatcgcagtcgacacaaagcatcgattgtcagctttctctgctcctgac
agctttgagagccaagcaaatggctcaggcaccagtggaagcgccacagtttgggaccat
gagaagctggagtggttgcaggatggcaggagaaaagacagccgaaggcggcgacagaca
gaggatgactacgatcctaccaccctgtatgtgccagaagactttctaaacagaaacact
cctggtatgcgtcgctggtggcagctcaaatctgagatgtttgacacagtaattttctat
aaggtggggaagttctatgagctctaccacatggatgctgtgattggagtcaacgagatg
ggactaactttcatgaagggaagctgggcacactcaggcttcccagagatcggctttgga
cgtttctcagatgtactggtccaaaaaggctacaaggtggctcgtgtagagcagacggag
accccagacatgatggaagcacgctgtaagaccatgcttaagcccaccaagtttgaccgc
gtggtgagaagagaggtttgccggattatcacacgaggcacccaaacctacagtgtgttg
gacggcgctccttcagagagtcagagcaagttcctgctgagtttaaaggaaaaggctgaa
gaggagagctccggctgttgccggacctatggagtgagctttgtagatacttctgtgggt
tatttccatgtaggtcagttcacagacgaccgtcactgctcacgtctgcgcaccctgata
gcacactttgcccctgccgaggtcctctttgaaaggggaaacccatctgttgaaacacgc
aaaatactcaaggcctctctgtcctctgctctgcaggaaggactcaatgcaggcactcag
ttctgggatgctcaaaaaacccttaaaaccctctcggaagaagattacttcagtgagact
gctgacaaggatcaggggacagggaacagcttccttcctcctcttctaaaaaagatgacc
tctgagagtgattcactgtgccttaccccaaaggagggctacgagctggcactgtccgca
ctgggtggctgcattttctacctgaagaagtgtctggtggacaaggagctgctctccatg
gccaactttgaagaatatgtccctgttgatgtcgagatggagaaagctgccggccctgcc
agcttttttgctcagactcgtcagcgcatggtcttggatggagtgactctggcaaaccta
gaaatatttcagaatggctcaggaggaacagaggggacactgttggagcgtttggacacc
tgctctaccccgtttggcaagaggctgctgaagcagtggctctgcgctcctctctgtaac
ccttcatccatcagggacagactggatgcagtggacgacctgatgggagctcaggcccag
gcaagtgaggtttcagacctgctgaagaagctcccagatttggagcgtctcctgagtaaa
atccacagcatcggcactcctctgaagagcgaggaccacccagacagcagagctgttctc
tacgaggaggtcacctacagcaaacgcaagatagcagacttcctctccacgctggaaggc
ttcaagaccatgcaggagatcatctctgtcctttctccagtttcggcccaatttcagtct
agattactttcccaagtggtcagtcagaagagcgaaaaagacggcctctttccagacctc
tcttccgaacttcagcgctgggagacagccttcgaccaccagaaagctcgcactactggt
gtcataacccctaaggctggcttcgacccagagtatgaccaggctctaaccgggatcaag
aactgtgagcgagagctgcaggattacctggacagacagaaaaagagacttggctgtaaa
agcatggcctactggggaactgggcggaaccgctttcagatggaggtgcccgacagcgtc
tcggagaggaacatccccgaagagtacgaggtgaagtcgacgaagaaaggctggaagcgt
tatgtgacgaaggagactgagcgactattctcagagttgcaaggatttgaggagaagaga
gacgctgccctgaaagactgcatgaggagactcttctacaactttgacaagaactacaga
gactggaagacgggtgtggagtgcatggcagtgcttgatgtgctgttggccttgtcacgc
tacagtcagggaggagatggatcaatgaccaggccgcaggtggtgctccctgaacatgat
gagcagttagctcccttccttgacctcactggttcccgccacccatgtgtcacaaagacc
ttttttggtgatgacttcatcccaaataacatctacatcggctgcgctggtagcagtgag
aatgatgaggaagaaaggcaggcctcgtgcgtcctcgtcacagggccgaacatgggcggc
aagtctactctcatgagacagtgtggacttgtgatcatcctcgctcagctgggctgctat
gttcctgccgagagcctgcgcttcacaccagttgacagagtcttcactcggctgggagcc
tcggatcgtattatggctggagagagtaccttcttcgttgagctgagtgagactgccagc
atcctgcaccatgccactaaacactcgcttgtgctcctggatgaattaggaaggggcaca
gccacatatgatggcacagcgattgccagcgctgttgtgaaggagcttgctgagaaaatc
tgctgtcgcaccctcttctctacacattaccactccctggtggaggattacgccaacaac
cctgctgtgcggttgggccacatggcgtgcatggtggagaatgaatgtgaagatccaagt
caagagaccatcacattcctctacaagttcatcaccggggcttgtccaaagagttacggc
ttcaacgctgctcggctcgccagcctaccagaggctgtcatccaatcaggacacagaaag
gccagagagtttgagaagagcaccatcagcctcagactcttcaagaagctctgccagttt
gctgaagacacttcactggggaacacacactttgcatcactcgttcagatgatcaacacc
ctgtag
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