Thunnus thynnus (Atlantic bluefin tuna): 137196901
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Entry
137196901 CDS
T11154
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tty03016
]
137196901 (tarbp1)
03036 Chromosome and associated proteins [BR:
tty03036
]
137196901 (tarbp1)
Enzymes [BR:
tty01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
137196901 (tarbp1)
Transfer RNA biogenesis [BR:
tty03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
137196901 (tarbp1)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137196901 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
137196901
NCBI-ProteinID:
XP_067465967
LinkDB
All DBs
Position
14:complement(12360313..12374335)
Genome browser
AA seq
1623 aa
AA seq
DB search
MNSVLINAVLSSSPDYDALFESLSWPSGSWPETERTEALTAFIEGLGELLTNSDTTPFTD
AKKRRIKDQIESIIWTQSLPLLARISAEAEGIRCRESTSAVCRLVGVCVPLCDAAVAGRV
ALSVLPSLQQSEEELPGVGRLGVEVASEVIAAVLPSLSADEQLTLKTLSSALSCIKTLPD
ALVSKITVRLLLTLLSCCSGVRLSSILKLILDDLCSWHSTDRSPAVTERTLLCLTALSDH
LLSPHGLQSSSSVSDPRQSLQFWRMVQDGLTHRDSVSRKRALYLLKRCVALSEEQGLDCP
LLPSEEDETLFRWASNRSKLLREFWEDYALVMETLEENQIHVVQPVLNRIDTLIQTTAND
SQGHGLFHPSWLLCVYQRMFHSENKSLMKEGVCHLLELRVLRQPAFALAFSQFIVGPFMD
VLSETSLFYKAAGQSVGDCPELAAKLQVFMTNFFNSLPSEDRGPVLLQLIQQLGSKHWCA
VPLLFVSQALSKLSPGPLLGVDGLIALREVLRCTMITHQVLLRGAAQCFLLKSALCLIDV
NTVTLDDVFSFLMHFRADESLCRGTQLWNQLCTWISDNEGSFKPSIKDRDCTSATTNKET
VRAYVQAETHAYLQVPASTGQTEGLPDSREADKLSRSILLCVDMETSRAGAEVSNILESL
LSPLLDTLSRVSTNIYLPLRKSDKSLQLVLRLLQLGGSLSRQHAGEEQEDNVMVTMKKLI
FKVVDPIQEFILRRLCGELQELVDVERAELYLCVLTQLVVMYSSTPQHHSEIQQTYFPKL
IRYSLKVLQEPSQQIPSVANQVTRAVAMASLAMVCGLVEQQVVDMQSETLSVLRSLNDFF
YNPVSSSSQSQSSLGYFNKRLLKPQTDNSSEEGVQGTVLQNWGRTAARFMRDQWICLSFL
IKAAGIPDSVEISRVSKTLNAALSCSVEALALLPSDLVLPVLTFMETVLPQLVHDEEALC
VEAVTLSWQLVQGLSTNAHDFWPALKGFISMAFHHKLLKLTDTQAAMLTAAMKQIATELM
ELSESKSGVFSVLFQHCCQTWLPSNPGGGDQADTNFSSVFSHINILTEACVYGPVFRRDQ
RLIQDVQTYVEQLGEEFPANVVIASDNRDDQLPRTCALAFLSRLDSSNPLHERLMEDLVI
NLLKKDNNISKSKVRYYSNSLQHRVKNRVWQTLLLLLPKLREEFVTTLLKGAFEAGFCSN
QASVKYLIEWMMILILVKYPQHIDGFWACFNMDHERTKTSICTFLSVLVHFNIIVPLLKD
QAVQLRKALDIILQWCFNHNFSVRLYALLALKRVWSLVEARGEEGADGFGELSTVIKACL
NQAEAMQNTGNANKNWIRIQEHFFFGAFHPIRDYSVETIFYTFPSLSELADDEWIPPWKF
EKLSRLSESSTFPLKNPVPDLSQLQPGDWIQQDKGEQDKEERWAEVQKKITPWRLGIQEQ
EPELQLVPQQRAARLGKLHGALLVVASLIDKPTNLGGLCRTCEIFGASALVLDSLRHISD
KHFQSLSVSSELWLPLLEVKPLELTDFLQVKKNEGYCIVGVEQTANSQSLQDYQFPEKTL
LLLGNEREGIPANLLQLLDVCVEIPQQGVIRSLNVHVSAALLIWEYTRQHFTSGSSEVNS
KHN
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgttttgattaacgcagtcttgtccagctctcctgactacgacgctttgttt
gagtctctgtcttggccgagtgggtcgtggccggagacggagcggacggaggcgctgaca
gctttcatagaaggactcggggagcttctgaccaactcggacacgactccttttacagac
gcgaaaaaacgacgtattaaagatcaaatcgagtcaataatttggacgcagagtctgcct
cttctcgcaagaatatccgcagaagctgaaggcatacggtgcagggagagcacctccgct
gtctgccggcttgtaggtgtctgtgtcccgctgtgtgacgcggctgtagcggggcgagtg
gctctgtccgtcctgccgtcgctccagcagtcagaggaggagctgcccggtgtgggtaga
ctcggtgtggaggttgccagtgaagtaatagctgctgttttaccttctctgtcagcagat
gaacagctcacattaaagaccttgtcatctgccttgtcctgcatcaaaactctccctgac
gcattggtctccaaaatcaccgtccggcttctcttgaccctcctgagttgctgcagcggt
gtgaggctcagcagcatcctcaagttgatcctggatgatctgtgcagctggcactccact
gaccgctcacctgcggttacagagcggacactgctgtgtttgaccgccctgtcagaccac
ctgctgagccctcatggtctgcaatcctcatcctctgtgtccgaccctcgtcagtccctc
cagttctggaggatggttcaggatggactgacgcacagagacagcgtgtcacgtaagagg
gcgttgtacctgctgaagaggtgtgtagccctgtcagaggagcaggggctggactgtcct
ctccttccatcagaggaagatgagaccttgttcagatgggcttcaaacaggagcaagttg
ctcagagagttctgggaggattatgcgctggtgatggagaccttagaggaaaatcagatt
catgtcgtccagccagtgctgaacagaatagatacgttgatccaaacaacagcaaatgac
agtcaaggtcatggtcttttccatccctcctggctgttgtgtgtgtaccagcggatgttc
cacagtgagaataaatccttaatgaaagagggagtgtgtcacctgttggagctgcgggtc
ctccgacagccggcctttgctttggctttttctcagtttatcgttggcccctttatggat
gttctgtctgaaacttcgctcttctacaaggcagctggccagagtgttggagattgtccc
gaactggcagctaaactccaagtcttcatgaccaacttctttaatagcctgccgtcagaa
gatagaggccctgtgttgctgcagctgatccagcagctgggctccaagcactggtgcgca
gtacccctcctctttgtctctcaggccctgtccaaactctctccaggtccactgctgggg
gtcgacgggctcattgctctcagggaggtgctgcgctgcaccatgatcactcatcaagta
ctcctgagaggtgctgcccagtgcttcttgctgaagagcgccctctgtctcatagatgtg
aacacagtcaccttagatgatgtttttagtttccttatgcatttccgggcagatgagtca
ctgtgcagagggacgcagctttggaatcagttgtgcacctggatatcagacaatgaaggc
agtttcaaacccagcatcaaggatcgagattgtactagtgctaccacaaacaaagaaact
gtaagagcctacgttcaagctgaaacacatgcttatctccaagtcccagctagcacaggt
cagacagaggggttacctgactcccgagaggctgacaagttgtccaggtccattctgctg
tgtgtggacatggagacaagtcgagcaggagcagaggtcagtaacatcttggagtcatta
ctgtctccgctgctggacaccctgagcagagtcagcaccaatatctacctgcctctgcgt
aagagtgacaagagcctgcagctagtgctccgactgctccagctcggaggatcactgagt
cgtcagcatgctggagaggagcaagaggataacgtgatggttaccatgaagaagctaatc
tttaaagttgtcgatccaatccaggagtttatcttgaggcggctgtgtggggagttgcag
gagctggttgacgtggagcgggcagagctgtatctgtgtgtcctgacgcagctggtggtc
atgtacagctctacacctcagcaccacagtgaaattcagcagacctatttccctaaactc
atcagatacagcctcaaggtcctgcaagaaccaagccagcagatcccctctgtggcaaac
caggtgactagagcagttgccatggcatccctggccatggtatgtggtcttgtggaacag
caagtggttgacatgcaatcagagaccctttctgttctcagatccctgaatgacttcttc
tacaacccagtttcatcttcctcacaaagtcagtcatctctgggatacttcaataaacgc
ctgctgaaaccacagacagataattcaagtgaagaaggagtgcaaggtactgtgctacag
aactggggacggacagctgcccgtttcatgcgggaccagtggatttgcctgagctttcta
ataaaggccgctgggattcctgactctgtagagatctccagagtgtccaagactctcaat
gctgccctgagctgcagcgtggaggcactggctctgctgcccagcgacctggtgctgcct
gtactcaccttcatggagacagtgctgccacaattagtgcatgatgaggaggccctctgt
gtggaggctgtgactctgagctggcagctggtgcagggactgagcactaatgcccatgac
ttctggcccgccctcaaaggcttcatctccatggctttccaccataaactgctcaaactg
acagacactcaggctgcgatgctcacagcagccatgaaacagatcgccactgagctgatg
gagctgtccgagtccaagagcggagtgttcagtgtgctgtttcagcactgctgtcagaca
tggctgccctcaaaccctggcggcggtgaccaggctgacaccaacttttctagtgttttc
agccacatcaacattctcactgaggcttgtgtctacggaccagtgttcaggagagatcag
cggctcatccaggatgtccaaacatatgtggaacaactcggtgaggaatttcctgctaat
gttgtgatcgcaagtgataacagggacgatcagttgccccggacatgtgcgctggctttc
ctcagtcggctggattcttccaacccactgcatgaaagactgatggaggatctagttatc
aatctgttaaaaaaggataataacatatcgaagtcaaaagtacgttactatagcaactca
ctgcaacatcgtgtcaaaaacagagtgtggcaaacgctgctgctgttactgcccaaactc
agagaggagtttgtcaccactttgctgaaaggtgcctttgaggctggattctgcagcaac
caggcctcagtcaagtacctgatcgagtggatgatgattctgatccttgtgaaatatcca
cagcacatagacggcttttgggcctgtttcaacatggatcacgaacgaaccaagacgagc
atctgcaccttcctgtcagtcctggtacatttcaatatcatcgttcctcttcttaaggat
caggcagtgcagttgcgtaaagcactggatatcatcttgcagtggtgtttcaaccataac
ttcagtgtgcggctgtatgccttactggccctgaagagggtgtggagcttggtagaagcg
cggggagaggagggggcagatggttttggggagctgtctactgtgatcaaggcctgtctg
aaccaggctgaggccatgcaaaacaccggaaatgccaacaagaactggattaggattcaa
gagcacttcttctttggtgcctttcatcccatcagggattacagtgttgagaccatcttc
tatacttttcccagtctgtcagagttggctgatgatgagtggattccaccctggaagttt
gaaaaactgtcacgtttgtctgaaagttcaactttccctttgaagaatcctgtacctgac
ctgagccagctccagcctggagactggatccagcaagacaaaggtgaacaggataaggag
gagcgctgggccgaggtgcagaagaagatcaccccctggaggttggggatccaggagcag
gagcccgagcttcagctggtgccacagcagagagccgctcgactgggcaaactgcacggt
gccctgctggtggtcgcctcgcttatcgacaaacccaccaatttaggaggtctgtgcagg
acctgcgagatctttggtgccagcgctctggttctggacagcctccgccacatcagtgac
aaacactttcagtctctgagcgtctcctctgagctgtggcttcctctgctagaggtgaag
ccattggagctcactgacttcctgcaggtaaagaagaatgagggctactgtattgttgga
gtggagcagacagccaacagtcagagcctccaggactaccagtttcctgagaagactcta
ctacttctgggcaatgaacgagaaggtattcctgccaacttactccagctgttggatgtg
tgtgtggagatccctcaacaaggggtcatccgctcactcaacgtgcacgtgagcgctgcc
ctgctgatctgggaatacacacggcaacattttacctccggctcaagtgaagtcaactca
aaacacaactga
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integrated database retrieval system
