Thunnus thynnus (Atlantic bluefin tuna): 137197265
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Entry
137197265 CDS
T11154
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137197265 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137197265 (pnpt1)
03016 Transfer RNA biogenesis [BR:
tty03016
]
137197265 (pnpt1)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
137197265 (pnpt1)
Messenger RNA biogenesis [BR:
tty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
137197265 (pnpt1)
Transfer RNA biogenesis [BR:
tty03016
]
Prokaryotic type
tRNA degradation factors
137197265 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
CHX17_2nd
KH-I_KHDC4-BBP
KH_KRR1_2nd
DUF3990
Motif
Other DBs
NCBI-GeneID:
137197265
NCBI-ProteinID:
XP_067466663
LinkDB
All DBs
Position
14:complement(21937280..21962514)
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AA seq
770 aa
AA seq
DB search
MRYLLRLGSPFARLHIRLCHQSVYSSHANPRRVGVDIGEKKLEITSGRFARFADGSAVVQ
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPAGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MVDGELLINPTRAEMTSSSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IIHAIQQLVREQKVTKRTPVKVFSAPADMVEHVRKLASDRIYAVFTDYTHDKISRDEAIN
KVRLETEEDLKEKFPQAEPFEVIESFNTVSKEIFRNLVLNEYRRCDGRELTALRNISCSV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESSVKTDIITTALSGIKDKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPIIPKDFPFTIRVTSEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAVGLISKPTPEKPTEIQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIAKPRETRKDNGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMSEAQEFISEICKDDQE
QQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KFFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMRSNNNHTTNTDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatctgctcagactggggtcgccgtttgctcggcttcacatccgtctgtgtcac
cagagtgtctacagcagccatgcaaatccccggagagtgggagtagatatcggggagaag
aaacttgagatcacttctgggaggtttgccagatttgctgatggatccgctgtagttcag
ctgggggagacgtctgtgatggtgactgctgttagcaaaaccaaaccttctccgtctcag
ttcatgcctctggtggtggactacaggcagaaagcagcagctgctggtcgaatccccact
aactatttgaggcgagagctgggcaccactgataatgagattctcactagcagactcata
gacaggtcaattagacctcttttccctgctggttacttttatgacactcagatcctttgt
aacctgctagctgttgatggtgtcaatgatccagatgtgctggctatcaatgcagcctct
gctgctctggccctgtctgacatcccctggaacggacctattggcgctgttcgtgtcggc
atggtagatggagagttgctgatcaaccccactcgggcggagatgacttccagcagtctc
aacttgattgtggctggagcccccagcagtcaagtggtgatgattgaggcgtcggctgag
aacgtgctgcagcaggacttctgccatgcggttaaggttggagtcaaacacacccagcag
atcatacacgccatccagcagctggtgcgggaacagaaagtaaccaagcgcaccccggtc
aaagtcttctcagccccagctgacatggtggaacatgttcggaaattggcttcagacagg
atctatgctgttttcacagattacacccatgataagatttctagagatgaagctatcaac
aaagttcgactagaaactgaagaggatttaaaagaaaaatttcctcaagctgaacctttt
gaagtgattgaatccttcaacactgtgagcaaagaaattttccgcaatttagtgcttaat
gagtacaggaggtgtgatgggagggagttgactgctttaaggaacatttcttgcagcgtg
gacctctttaaaccgctccatggctcagctctgttccagagaggacaaacacaggtgctg
tgcagcgtcacgtttgattccctggagtccagtgtcaagacagacatcatcaccacagct
ttgagtggcatcaaagacaaaaacttcatgcttcattatgagttccctccatatgcaacc
aacgagattggaaagatgggaggtataaacaggagagagcttggacatggggccctggct
gagaaggctctgagaccaatcattcctaaagactttcctttcactattagggtcacttct
gaggtgttggagtcaaatggatcctcatcaatggcctcagcttgtggaggaagtcttgct
ctaatggatgcaggtgtgcccatctcttctgctgtggcaggtgtcgctgttggcctcatc
tctaaacccaccccagagaaacctactgagatccaagactacagattacttactgatatt
ttgggaattgaggattacctcggagacatggacttcaaattggcaggaacaaacaaaggc
atcactgctttacaggctgacgtgaagattccaggtttgcctctgaaggtggtcatggag
gctattcaacaggccacagtggcaaagagggaaatcttgggcatcatgaacaaatgtatt
gcaaaaccaagagagacaaggaaggataatggacctgttgttgagaacgtgcgggtccct
gtctccagacgagcacgcttcgtcggtccaggaggctataaccttcgcaggctacaagct
caaacaggtgtgacaataagtcaggtggacgaggagacgttctctgtgtttgctccaacg
ccaggagccatgagcgaagcccaagagttcatcagtgagatctgcaaagatgatcaagaa
cagcagctagagtttggtgccatctacaccgccaccatcactgaaataagggacatcggt
gtcatggtgaaactctatcccaatatgagcgctgtcctgctgcacaactcacagctggac
cacaaacggatcaaacatccaagtgctttgggtttagaggtcggacagcagatccaggtc
aaattctttggacgggacccaacagacggcagaatgagactttcacggaaggtgctccag
tctcctgctgcaactgttgtcaagacactgagtgagaaacagagtatctccatgcgatca
aacaacaatcacacaaccaacacagatttgtga
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