Thunnus thynnus (Atlantic bluefin tuna): 137197386
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Entry
137197386 CDS
T11154
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137197386 (ddx43)
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137197386 (ddx43)
Spliceosome [BR:
tty03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137197386 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_PNO1_2nd
KH_2
KH-I_KHDC4-BBP
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
137197386
NCBI-ProteinID:
XP_067466863
LinkDB
All DBs
Position
14:27471724..27485191
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AA seq
720 aa
AA seq
DB search
MSDWEDEYNEGGVAIQKKTITNSAPTEWKLPCDDRRQESVFFGVRNGTRFGASSERRADR
RTGESEYKNSRGGGEGRPFSRSTDRGGAGRWTFGNEKSDASPPVTINVENGSVGRIIGRG
GAKIRELEESTGARIKINKGDYEGEVVIFGSPVAQQKAKEMIKDLVADGNSRFRNGPGRG
GDYGGGGDGGVRDGSVWSAAELQAADAAPARVSIDWNTIRENREKYEELKWKDLPPMKKK
FYTEAESVSQLTAEEVSEWRKENNNIFVDDLKEEGEKRTIPNPCRNFLEAFELYPEIMEN
IDRVGFVKPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRAERGG
PGMLVLTPTRELALQIETECNKYRYKGYKSICIYGGGDRRSQINLVKGGVDIVIATPGRL
NDLQMNELINLHSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPTGVRR
LAKSYLKNPMMVYVGTLDLAAVNTVQQTVLIVHEEEKKSYVFDFIRNMHPQDKVLIFVGK
KLMADDLSSDMCLQGLAVQSLHGDREQCDREEALKDFKDSRVRILVATDLASRGLDVHDI
THVFNFDFPRNIEEYVHRVGRTGRAGRSGAAVTLVTRENWRMAPELIPILERAGQEVPEE
LVLMAERYEKHKREKEMCNPRGGQGRSGGGGGGGGGGGGGWGRRDGGGRGSRDRSQNWGF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggaagatgagtacaacgagggcggtgttgctatccagaagaagactatt
actaactcggcaccgactgaatggaaattaccatgtgacgaccgtcgacaggaaagtgta
tttttcggtgtaagaaatggaaccaggtttggagcctcaagtgagcggagagctgatcgc
aggaccggggaatccgagtacaagaattcgagaggtggaggtgaagggcgcccgttttcc
cggagtacggatcgcggaggcgcgggaagatggacctttggcaatgaaaagtcggacgcc
tcaccacctgtgactatcaacgtggaaaatggctcggttgggaggataataggtcgaggt
ggagccaaaattcgtgaacttgaagagagcaccggtgcaagaatcaagataaacaagggg
gactatgaaggtgaggtggtcatctttgggtcccctgttgcccagcagaaggccaaagag
atgattaaagacctggtggcagatggcaactctcgattccgcaatggtcctggtagggga
ggagactatggagggggaggtgatggaggagtaagggatggctctgtctggtctgctgca
gaattacaggctgcagatgctgccccggcccgtgtatccatagattggaacaccatccgg
gagaacagggaaaagtatgaagagctcaagtggaaggacctcccacccatgaagaagaaa
ttctacactgaggcagagagtgtatcccagctcacagcagaagaagtcagtgaatggaga
aaggagaataacaatatctttgtggacgacctaaaggaggaaggggagaagcggaccatt
cccaatccctgccgcaactttttggaggcctttgagctttatccagagatcatggagaat
attgaccgggttggctttgtcaagccaacccccatccagtctcaggcatggcctgtgctg
ctgagcggggaggacctgatagccatcgctcaaacaggaacaggaaaaactctggcctac
ctcctgcccgggttcatccacatggatggacagcctgtacctagagctgaacggggtggc
ccaggcatgttggtgctgactcccaccagagagctggccctgcaaattgaaactgagtgc
aacaagtaccgctataagggatacaaaagtatctgtatctatggtggaggggatagaaga
agccagatcaatctggtgaagggcggggtggacatagtgatcgccacgccaggccgacta
aatgatctacagatgaatgagctaatcaatcttcactccatcacttacttggtgttggat
gaggcagaccgaatgctagatatgggctttgaaccccagataatgaagattctcctggac
atccgcccagaccgacagaccgtcatgaccagtgccacctggcccactggtgtgagacga
ttagccaaatcttacctaaagaatcccatgatggtttacgtgggcaccctggacttggca
gcagttaacacggtgcagcagacagtgttgatcgtacatgaagaggagaaaaagtcctac
gtgtttgacttcatcagaaacatgcaccctcaggataaagtcctcatctttgttggcaag
aagctcatggctgatgacctgtccagtgacatgtgtctgcagggtctggctgtacagagt
ctccatggagaccgtgagcagtgtgaccgtgaagaagctctcaaggattttaaagacagt
cgagttcgtatcctggtcgctacagacttggcatctcgagggttggatgtccatgacatt
acacacgtcttcaactttgacttcccacgaaacatagaggagtatgtccatcgtgtgggc
cgcactggcagagcaggacgttcaggtgctgctgttaccctggttacaagagaaaactgg
aggatggcccctgagctgattcccatcctggagcgagcaggacaagaggtccctgaagag
ctggtgcttatggcagaaagatatgagaagcacaagagggagaaggagatgtgcaatcca
aggggaggacaggggaggagtggaggtggaggtggaggtggtggtggtggtggaggtgga
tggggaaggagagatggtggagggagaggaagcagggatcgaagccagaattggggattc
taa
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