Thunnus thynnus (Atlantic bluefin tuna): 137197628
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Entry
137197628 CDS
T11154
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04137
Mitophagy - animal
tty04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137197628
04137 Mitophagy - animal
137197628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137197628
Membrane trafficking [BR:
tty04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137197628
Protein recycling
Other Rab GTPase associated proteins
137197628
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Snapin_Pallidin
RmuC
Cytochrom_B562
DUF5685
DUF6279
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
137197628
NCBI-ProteinID:
XP_067467218
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All DBs
Position
2:22180748..22185948
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AA seq
470 aa
AA seq
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MWTDKQRGIRVSQEELLCKNACGYYGNPAWQGFCSKCWRERARPAGAERQDARPTNDGTP
LTFSKFEEKKNAEKGRRINTMRRLFWGSPSPPKRQESSETHANVLKAYQGLEPGDFTGFL
KILRSPSSQRLQSRCTAFLKTMEAYHDLPVQKQSDLVQDFYQSFAEYFSSFSEAQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLGVPFPENNTTVTGDP
FLPAITAIIEMDAKRAPQDKLACVTKCSQHVFEALSTSNTEPANADDFLSGLVYVVLKAN
PPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLSPEEFEGYMLR
QRAPFARSKRQQAASETQHLLEELKGRQEKLDQGMDALGVQLQKWVQAVNSQLDEATGQL
AVVQKEITAQSELSQFSSSSHDTVPPGDDTKDQTVLVFSDECAGPEDTDC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagacaagcaaagaggaatcagagtttctcaggaggagctgctctgcaagaac
gcctgtgggtattatggaaaccctgcatggcaaggtttctgctccaagtgctggagagag
agagcccgtccagctggagccgagagacaagacgcgagaccaaccaatgacggaactcct
ctcaccttctccaaatttgaggagaagaaaaatgcggaaaagggccgtcgaattaacaca
atgaggagactcttctggggtagcccatcacctcccaaacgtcaagagtcttctgaaaca
catgcaaatgtgttgaaagcctaccagggccttgagcctggggacttcactggtttccta
aagatacttcggagcccatcctcccagcgcttgcagtcccgatgtacagctttcctcaag
acaatggaggcttaccatgatctgccggtacagaagcagtcggatcttgtgcaggatttc
taccagtcctttgctgaatattttagcagtttctccgaggcccaggtcactcagataatg
gagcatgtggagaagttgataatgacacggttgcacaaatgggttttctgccatgacagc
tgtgatgatgaacagaaggacctggctctgcagagaagaatacgttcattaaactgggtt
actcctcagatgctgggtgtaccttttccggaaaataacaccacagtcacaggtgatccc
tttctgccggctataacagccataattgagatggatgccaaacgagcgcctcaggacaaa
cttgcatgtgtgaccaaatgcagtcagcacgttttcgaagcactctccacctcgaacact
gagcccgctaatgccgatgacttcctgtcaggcctggtttatgtggtgctgaaggccaat
ccacctcgattacactccaacatgcaatatgtgattcgttttggcctccctcacagtctg
atggcaggagagagcggctactatttcacaaatttgtcttgtgcagtggccttcattgaa
aaactggatggaccagcactcaacctcagtccagaagagtttgagggctacatgctgcgt
cagcgagctccctttgcacgaagcaagaggcagcaagctgccagtgaaacacaacacctg
ctagaggagctgaagggcagacaggagaagctggaccaaggaatggatgctctcggcgtg
cagctacaaaagtgggtgcaagcagttaattcacaactggatgaggcaacaggccagctt
gctgtggtgcagaaggagataacagctcagtcggagctctcacagttctcatcctcatct
catgacacggtgccaccgggggacgacaccaaagaccagacggtgctggtgttttcagat
gaatgtgcaggtcctgaagatacagactgttag
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