Thunnus thynnus (Atlantic bluefin tuna): 137198211
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Entry
137198211 CDS
T11154
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tty00535
]
137198211
Proteoglycans [BR:
tty00535
]
Extracellular matrix (ECM) proteoglycans
Others
137198211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4959
VWA_3
DUF4998
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
137198211
NCBI-ProteinID:
XP_067467988
LinkDB
All DBs
Position
15:3282795..3505515
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AA seq
1870 aa
AA seq
DB search
MQFSVRLSLCLLGFVLVSLFPQPAQGQVSSPRRFRAKVLSPSKLHISWKEPKGEFESYKV
IYTTQPGGKQTEVQISKQEAKLIIEDFDPSKEYSFKVIAVQGGQQSKPLQAKHEAQRSAV
EMVQSQRRPDSGVTEENNEISEAEEGFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLE
NLVKAFSVEFDKTRIGLAQYSGDPRIEWHLNAYSTKEAVIDAVKNLPYKGGNTLTGLALT
FILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLREAGIELFAIGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLTKTVCERVDQLDKQIKGGGEPAPPPTSVSPPS
DLVTSDVTARSFRVTWTHAPGQVEKYRVVYYPASGGQPDEKVVQGTQNSVELNYLNSLTE
YQVAVFAIYHSSASEALRGSATTLALPMVNDLELFDITHSTMRVRWKTAAGASGYMILYA
PLTEGDPADEKEVKVADSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLTP
ARNLRFSDVDHSSARLTWDSASRKVIGYRVMYVKTNGVQTNEVDVGSVTTWMLKNLTSLT
EYTVGVFAVYNEGQAEPVTKSFTTKTVPDPLDLRSSDITTDSFRVSWQHPASDVLLYRLT
WMPADGADREEALVNGNINTYLIKGLSPASEYEVLLAAIYKNEVESDEVILVETTVDRAT
TVATTTTTTAAPRYGVRNMRIDDETTFSMRVSWQQLDSWNVRHYRLSYISARGDRAEETR
TVPTGQNSLVLQPLLSDTEYKIAITPVYMEGDGPTAARMGRTLPLSAPRNLRVSEEWYNR
FRISWDAPPSPTMGYRVVYQPLSAPGSALETFVGEDVNTMLIVNLLSGTEYSVKVIASYT
TGSSEALAGRAKTLYLGVTNLSPYQVRMTSMCVQWQPHRHANAYRVLIESMLNGQKQETK
LSGGANRHCFNSLKANTQYKISVYAELQDGTQGPAVTAYEKTLPVPTLPPTLPPTTTPLP
TIPAAMEVCKAARADLVFLVDGSWSIGDENFLKIIRFLYSTAGALDQIGPDGTQVAIAQF
SDDARTEFKLNSYNDKQRLLDAINNISYKGGNTKTGRAIQHVKENIFTAEAGMRRGIPNV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FKKIEEKLVTFVCEAATATCPAVPMSGSTTPGFRMMELFGLVENRYSSVSGVSMVPGTFN
TFPCFHLHSDALLAQPTRYIHPEGLPSDYTITLLFRLLPNTPEEPFAIWEILNKNNEPLV
GVILDNGGKTLTFFNNDYKGDFQTVTFEGPEIKKLFYGSFHKLHIAISKTSAKVVIDCKL
VTEKTINAAGNITTDGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWANRDKCCELPG
LRKEVDCPALPKACTCTQDSKGPAGPAGPPGGPGIRGARGDRGEPGPVGPTGPVGDIGVP
GPQGPQGPQGPSGRSIMGPPGAQGERGQKGEAGQQGTQGIPGRAGEPGREGPAGSRGLPG
KDGPPGREGPTGIIGTPGAPGAPGNTGPPGKQGELGPPGPPGNKGDKGERGDLQSTASVQ
AIARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGRNGSPGPQGEQGPPGRP
GFPGQNGQNGQPGERGQPGEKGEKGSQGVGVQGPRGPPGAPGANGQGRPGSQGPSGRPGN
PGASGRPGVPGPVGPAGPPGYCDQNSCMGYNVGEREDVTDGGAIPAVQLPPNLFQNYGEA
EEDDPYRYYQPNYPAPRPVQPDDPALFPDNIELRSPGVHRSSRSLDGEEETLGQKRRLMR
GAKKLPGLTN
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcctctgcctgctcggctttgttctcgtttctctgttc
cctcagccagcgcagggccaagtttcatcgccacggaggtttcgtgccaaagtcctgagt
cccagcaagctgcacatctcatggaaagaaccaaaaggagagtttgaaagctacaaagtg
atttacaccacacaaccaggtgggaagcagacggaggttcagatatcaaaacaggaagca
aagctcatcatcgaggactttgacccctctaaagaatacagctttaaggtcattgcagtc
cagggaggacagcaaagcaaacctcttcaagccaaacatgaagctcagcgatcagccgtg
gagatggttcagtcccagaggagaccagacagcggagtcaccgaggaaaacaacgagatc
tcagaagctgaagaggggtttatgtgtaagacgccggccatagccgacatcgtgatcctg
gtggacggctcctggagtatcggccgcatcaacttcaggctggtcaggactttcctggaa
aacctggtcaaggctttctccgttgagtttgacaagaccaggatcggactggctcagtac
agcggagaccccaggatcgagtggcatcttaacgcttactccaccaaagaggctgtgatt
gatgctgtaaagaacctgccgtataaaggaggaaacacactgacaggtctggctctgacc
tttatcttggagaacagctttaaaccagagtctggatccagacccggcgttcccaaaata
ggaatcctcatcactgacgggaagtctcaggatgatgtgatcccccccgcacagagcctg
agggaagctgggatagagctgtttgccattggtgtgaaaaacgccgatgagaatgagctg
aaggccatcgcctcccctcccgaggaaactcacgtctacaacgtggcggacttcagcgtg
atgagcgacatcgtggaaggtctcaccaagacggtctgcgagcgagtggatcagctcgac
aagcagatcaaaggaggaggagaacctgcacctccgcccacctctgtgtctcctcctagt
gacctggtgacctcggacgtcacggctcgtagtttccgggtgacgtggactcatgctcca
ggccaggtggagaagtaccgagtggtttattatcctgccagcggaggacagccggatgaa
aaggtggtccaggggacacagaacagcgtggagctcaactatctgaactctctgacggag
taccaggtggccgtgttcgccatctatcacagctccgccagcgaggccctgagaggaagc
gccaccacattggctctgccaatggtgaacgacctggagctgttcgacatcacccacagc
accatgagggtccgctggaagaccgccgccggggcttctgggtacatgatcctttacgcc
ccgctgacggagggagaccctgcagacgagaaggaggtgaaagtagcggactcggtgaac
gaggtggagctggaaggattgacgccggctacagaatacacagtaaccgtctacgccatg
tacggcgaggaggccagtgaccccatgaccagccagcagaccacattaccgctgaccccg
gcgaggaacctgcgtttctcagatgtggatcacagctccgcccggctcacctgggactcc
gcctccaggaaggtcatcggctaccgcgtgatgtatgtcaagaccaacggagtccagacc
aacgaggtggacgtcggcagcgtgacgacctggatgctcaaaaacctgacgtcattaacg
gagtacacagtcggtgtgtttgctgtttacaacgagggacaagcggagcctgtgactaaa
agcttcaccacaaagaccgtcccagacccgttggatctgaggagcagtgacatcaccaca
gacagcttccgggtgtcatggcaacacccggcctctgacgtgttgctgtaccgactcacc
tggatgccagccgacggagcagacagagaggaggctctggtgaacggaaacataaacacc
tacttgataaaaggactcagccccgccagcgagtacgaagtcctcctggccgccatctac
aagaacgaggtggagagcgacgaggtcatcctggtggagaccaccgttgatagagcaacc
accgtcgctacgacaaccaccaccacagcagctcctcgttacggagtgaggaacatgagg
atcgacgatgaaaccaccttcagcatgcgggtgtcgtggcagcagctcgactcctggaac
gtccgacattatcggctgagctacatcagcgccagaggagaccgagcggaggagacgagg
acagtgccgacgggtcagaacagcctggttctgcagcctctgctgtcagataccgagtac
aaaatcgccatcactcccgtttacatggaaggagacggaccgacagcggctcggatggga
cgaacacttcctctctcagctccgaggaacctgcgggtgtcggaggagtggtacaaccgc
ttcaggatcagctgggacgctccaccgtcacccaccatgggctacagagtcgtctaccag
cctttatctgccccgggatcagctctggagaccttcgtcggcgaggacgtgaacaccatg
ctgatcgtcaatctgctgagtggaaccgagtacagcgtcaaggtcatcgcctcctacacc
accggatccagcgaggccctcgcaggaagggccaagaccttgtacctgggggtgaccaac
ctgagtccatatcaggtgaggatgaccagtatgtgcgtccagtggcagcctcaccgacac
gccaacgcctacagagtgctcatcgaatccatgctcaatggtcagaagcaggagacgaag
ctcagcggaggagccaacagacactgtttcaacagcctgaaggccaacacgcagtataag
atcagtgtttacgcagagctgcaggacggaacgcaaggacctgcagtcactgcgtacgag
aagacattacccgtcccaaccctgccgccgaccctcccaccgaccaccaccccgctaccc
acaatccctgctgccatggaagtctgtaaggcggcccgagcagacctggtcttcctggtc
gacggttcctggagtatcggtgatgaaaacttcctgaagatcattcgtttcctgtacagc
accgccggagctctggaccagatcggcccagatggcacacaggtcgccatcgcccagttt
agtgatgacgcacgaactgagttcaagctgaactcgtacaacgataagcagcgactgctg
gacgccatcaacaacatctcctacaagggaggaaacaccaagacaggtcgagccatccag
catgtgaaggaaaacatcttcacggcggaggcagggatgaggagaggaatccccaacgtc
ctggtggtcctcaccgacggccgatcccaggatgacgtcaacaaggtttccaaggagatg
cagatggaaggttatatcgtgtttgctatcggcttcgctgacgctgactacggggagctg
gtgagcatcgccagtaaacccagcgacagacacgtcttcttcgtggacgacctggacgcc
tttaagaagatcgaagagaagctggtgacctttgtgtgtgaagccgccactgccacttgt
ccagcagtaccgatgagcggcagcacaacaccaggtttccgtatgatggagctgtttggg
ctggtggagaatcggtacagcagcgtctctggtgtttccatggtacccggcaccttcaac
accttcccctgtttccacctgcacagtgacgctctgctggctcagccaaccaggtacatc
catcctgaagggctgccctcagactacacgattaccctgctgttcagactgctgcccaac
acccccgaggagccgttcgccatctgggagatcctgaacaagaacaacgagccgctggtt
ggagtcatcctggacaacggaggaaagactctgacgttcttcaacaacgactacaaagga
gatttccagactgtcaccttcgaggggccagaaatcaaaaaactcttctacggcagcttt
cataagcttcacatcgccatcagcaagaccagcgccaaagtggtgatcgactgcaagctg
gtgacggagaaaaccatcaacgcagcgggaaacatcaccacagacggactggaagttctg
ggcaggatggtccgctccagagggaacaaggacaactcagcaccgtttcaactccagatc
tttgacatcgtctgcagcacttcgtgggcaaacagagacaagtgctgcgaacttcctggt
ctgaggaaagaggtagactgcccggcgctgcccaaagcctgcacctgcacccaggatagc
aaaggtcccgccggccctgctggaccaccaggaggcccaggaatcagaggagccagaggt
gatcgtggagagccgggcccggtggggccaacgggtccagttggtgatataggtgtacca
ggacctcagggaccccaaggaccacagggacccagtggacgctccatcatggggccccca
ggtgctcaaggtgagagaggacagaaaggtgaagctggacaacaaggaacgcagggaatt
cctggtagagctggagaaccaggcagagagggacctgcaggatccagaggactgccagga
aaagacggacccccaggcagagagggccccacagggattattgggactccaggagcccca
ggggccccaggaaacacgggccctccaggaaaacagggagaactgggaccaccgggtcct
cctggaaacaagggagacaagggtgaacggggtgacctccagtcgacagcttcagttcag
gccatcgccaggcaggtctgtgagcagctgattcagagtcacatggctcgctacaactcc
atcctcaaccacgtacccagcccgccagtgtccatccgcaccgtgccgggaccccccgga
gagcccggccgaaatggatccccagggcctcagggagaacaagggcccccaggaagacct
ggcttcccaggacagaacggacagaacgggcaaccaggagaaagaggtcaaccaggagag
aagggtgagaagggatctcaaggtgtgggagtccaaggccccagaggacctccaggagct
cccggagccaatgggcagggcagacctggcagtcagggtccatcagggcgacctggaaat
cctggagcctctggtcggccaggggtccctggaccagtcggacctgcgggacctccaggc
tactgcgaccagaactcctgtatgggctacaatgttggagagcgcgaggatgtcactgat
ggcggcgctatccccgcagtccaactgccgcccaacctcttccagaactacggtgaggcg
gaggaggacgacccgtaccgctactaccagcccaactacccggccccgcggcccgtgcag
cccgacgaccccgcgctgttccccgacaacatcgagctgaggtcccccggagtccaccgc
agctcccgcagcctggacggggaggaggagacgctcgggcagaaaaggagactaatgaga
ggcgccaagaagctgcctggactaactaactga
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