Thunnus thynnus (Atlantic bluefin tuna): 137198480
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Entry
137198480 CDS
T11154
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137198480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137198480
03036 Chromosome and associated proteins [BR:
tty03036
]
137198480
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137198480
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
137198480
mRNA degradation factors
5'-3' decay
Decapping complex
137198480
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137198480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
137198480
NCBI-ProteinID:
XP_067468465
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All DBs
Position
15:9334193..9346021
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AA seq
489 aa
AA seq
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MATARTENVGPVVMGLNKQNGQLRGQTKPASVQPAPTTQGKALGAPQKPGSAAQEGGGIK
FGDDWKKSLKLPPKDNRVKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESI
PIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQICIQI
SKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRVQMMVMDE
ADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLMEELTLK
GITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAK
MMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR
FGHLGLAINLITSEDRFNLKAIEDQLVTDIKPIPSSIDKSLYVAEFHSGSADCDVEEVEE
KSGRQQDST
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgccagaacagaaaacgttggcccggtcgtcatgggactgaacaagcagaac
gggcagctcagaggacagaccaaaccagcttcagtccagccagcacccacaactcaagga
aaggctttgggtgcaccccagaaaccaggcagtgcggctcaagaaggaggaggcattaag
tttggagatgactggaaaaagagcctaaagctccctcccaaagacaacagggtcaaaacc
tcagatgtgacgtccactaaggggaatgaatttgaagattactgtctcaaacgagaactc
ctgatgggcatctttgagatgggttgggagaaaccctcccctatccaggaggagagcatt
cccatcgccctgtctggacgggatattctggcccgggctaaaaacggaacaggaaaaagt
ggagcctatctcatcccactgctggagaggatagaccttaaaaaggaccacatacaggcc
attgtcatggtgcccacccgtgagctggcactgcaggtgagccagatctgcatccagatc
agcaaacacctgggaggagtcaaagtcatggccaccaccgggggcacaaacctgcgagat
gacatcatgcgccttgacgagaccgtgcatgtggtcatcgccacgcctggtaggatcctg
gacttgattaagaaaggagtggcaaaggtggatagagtccagatgatggtgatggatgag
gcagataagctgctgtctcaggattttgtggtgctcatcgaggatatcatcagcttcctg
gccaagaacaggcagatcctgctctactctgcaaccttccccatcagcgtgcagaagttc
atggccaagcaccttcaaaaaccctacgagataaacctgatggaggagctgacgctgaag
ggcattactcagtactatgcctacgtcactgagaggcagaaagtccactgtctcaacaca
ctgttctccaggcttcagatcaaccagtcaatcatcttctgtaactccactcagagggtg
gagctcttggcaaagaagatcacccagctgggttactcctgcttctacatccacgccaag
atgatgcaggaatatagaaaccgtgtgttccacgacttcagaaacggactgtgcagaaac
ctggtctgcactgatctcttcaccagaggtattgacatccaggctgtcaatgtggtcatc
aacttcgatttccccaagaatgctgagacttatctccatcgtattggaagatcagggagg
tttggtcatctgggcttggccatcaacctgatcacatcggaggatcgcttcaacctgaag
gccatcgaagaccagctggtgaccgacatcaagcccattcccagcagcatcgacaagagc
ctctacgtcgccgaattccactccggcagcgccgactgtgatgtggaggaggtcgaggag
aaatcaggacgccaacaagacagcacctaa
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