Thunnus thynnus (Atlantic bluefin tuna): 137198742
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Entry
137198742 CDS
T11154
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137198742 (rnf115b)
04121 Ubiquitin system [BR:
tty04121
]
137198742 (rnf115b)
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137198742 (rnf115b)
Membrane trafficking [BR:
tty04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137198742 (rnf115b)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137198742 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
Zn_ribbon_19
zf-ANAPC11
zf-C3HC4_3
U-box_ZFPL1
DUF8608
Motif
Other DBs
NCBI-GeneID:
137198742
NCBI-ProteinID:
XP_067468764
LinkDB
All DBs
Position
15:12873051..12879053
Genome browser
AA seq
315 aa
AA seq
DB search
MQRLRLLWAHRRQGLRFTVKMAEAADRPLHRFFCHCCKCETNPKLPDFVCPRCESGFIEE
VTEDSSLLENNTSGAGDDSNSLFSELWQLLFMERSALLSHPPSSESNPDDSEQVSAGQSR
RSPVSPEAAEVREPEASSQPEQERLTRPEQRPPVEGIVQQFLAGLFANNGNPGAAPAALS
NMLQLHSNPGDYAWGQGGLDAVITELLGQLENTGPPPAEKEMISSLPTVCISQEQTACRL
ECPVCREEYSSGESVRKLPCLHYFHSECIVPWLELHDTCPVCRKSLDGVDNSLPPASDPL
EARSIRTEQQERQAI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtctgagacttttatgggcacaccgacgtcagggactgcgcttcaccgtgaag
atggcggaggctgcggacagaccactacaccggtttttctgtcactgctgtaaatgtgaa
acaaaccccaaactcccggatttcgtctgccccaggtgtgaatctggcttcattgaggag
gtgacagaagactccagcctccttgagaacaacacatcaggggctggtgacgattcaaac
tcattgttctcagaattatggcagctgctgtttatggagcgctctgccctgctgtctcat
ccgccctcctcagagtccaacccagatgacagtgagcaggtatctgctggtcagagccgt
cgttcaccggtgtcaccagaagctgctgaggtccgagaaccggaggcgtcttctcaacct
gagcaggagagattgacccggcctgaacaaaggcctccagtggaagggatcgtgcagcag
ttcttggccggcttgtttgccaacaatggaaaccccggtgctgcaccagctgcactatcc
aacatgctacagttgcactcaaaccctggagattatgcatggggtcagggaggtctggat
gctgtcatcacagagttgttaggacagttagagaacacaggtccaccccctgctgaaaag
gagatgatctcatcgctgcctacagtttgcatctctcaagaacagacagcctgcagactg
gagtgtccagtttgcagggaggagtattcgtcaggggaatcggtcaggaaacttccctgc
ctccattacttccacagtgaatgtatagtgccttggcttgagctgcatgatacctgccca
gtttgccgcaaaagcctcgatggcgtcgacaacagcctcccgcccgcatcagatccctta
gaagctcgctccatcaggacggagcaacaggagaggcaggcgatctga
DBGET
integrated database retrieval system
