Thunnus thynnus (Atlantic bluefin tuna): 137199234
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Entry
137199234 CDS
T11154
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137199234 (srrm1)
03015 mRNA surveillance pathway
137199234 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137199234 (srrm1)
03041 Spliceosome [BR:
tty03041
]
137199234 (srrm1)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137199234 (srrm1)
Spliceosome [BR:
tty03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
137199234 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
137199234
NCBI-ProteinID:
XP_067469473
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Position
16:21420021..21430454
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AA seq
863 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKEKDKDIRERAQSKSPRRRKTRSPSPRRR
SPVKRERKRSPSRSPRRKASPVGGSSPPPPLMQLPTKPLEQLVEPDTSGRAMPEPVIQEA
SSTCDTVVEVVKADSVTEVKEPSPEKTHKKEERPRSREREKDSRRERPHHRSRSHSRSRR
RRSRSRSYSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSS
GSRSPKKAMKRISSTPPRKQVHHPDTSISPAGKDRRSPSPRARRGRGSASPPRSSGLKRK
QGGRGDSPSDNAKSRPSEGSESEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSED
EGPKRPKAGPGARNGDVRRRRSRTPSPRRRHRDASPRKRRSPSPGGRRRRSPSPPRRRRS
PSPPRRRSPSPPPRRRSPSLRRYSPPIQRRYSPSPLPPQKRRFSSSPSKRSSPGAKRRPS
RSPKRRSSPAQRRRTPPSSTSPPRHRRSPMLPSGRPSRDTRSPVAASSRLSSSPANRGRT
VRGSTSPQGRFETSSTSPCSQRRQSPSHSGKPIRRVSRTPEPRNNQRPSPSPQLMRRVSS
RSRSVSPQQAAQKRPAPASASPSPSRSASVSPPPVKKASSGSGSQSPSKNSDVDGSGKKK
KKKKEKKHKKEKKHKKHKKHKKEKSGAAGTGDGQENQGVDEDGESRKESDSEVEDSLDDL
EKHLREKALRSMRKAQMSPSQMS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcggtacaagtgcggagcaagacaaccggttcagcaacaag
cacaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattacccagcgagtgacagagattctg
ggattcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggaaaagcacccg
gatagcaagatgatgcagatcaacctgacaggcttcctgaatgggaagaacgcccgggag
ttcatgaaggacctgtggcccctgctgctgagtgcccaggagaacattgctggcatcccg
tcagcttttctggaacagaagaaagaggaaatcaaacagagacagattgaacaggagaag
ctagcctctctgaagaaggtggatgaggataagaaggaaaaggacaaggatatcagagaa
agggctcagtcaaagagcccaaggaggcggaagacaaggtcaccatcaccgcggcgaagg
tcaccagtaaagcgagaaaggaaacgaagcccctcacgttccccacgacgcaaagccagt
ccagttggtggcagttcaccccctccacctctgatgcagctgcccacaaaacctttggag
cagcttgtggagccagatacatcaggaagagccatgccggaaccagtcatccaagaagct
tcttccacctgtgacaccgttgtagaggtggtgaaagcagactctgtgaccgaagtcaaa
gaaccctccccagagaaaacccataagaaagaggaaaggcccaggtctcgggaaagagag
aaggacagcaggagggaaagacctcaccaccgctcccgttctcattcccgctctcgtaga
cgacgctcccgttcaaggtcgtactcccctcgcagaaggcagagtcccaggagaagaatg
tctcctcgtcgaaggagcccacccagacgaggccccacgggctccagacacagacataga
cgctcccctgtccgcaggaggcgctctcgctcagcttcatcctctggcagcagctcctca
ggctctcgttcacctaaaaaagcaatgaaaagaatatctagcacaccaccccgaaaacaa
gtccatcatcctgacacctccattagtcctgctgggaaagacagacggtcaccgtctcca
cgggccagaaggggcagaggctcagcatcaccacccagatcatctggtctaaagcgtaaa
caaggcggaaggggcgattctccatctgataatgccaaatccagaccttctgaagggtct
gagtcagaggaggataaaaatgagaaaggggcaacagcagattcggtgcaacagcgacgt
cagtatcgcagacagaatcgacagtcgtcttcagatacagggtcttcctcttcagaagac
gaggggcccaagaggccaaaggccgggccaggtgccagaaatggtgatgtcaggaggaga
cgtagccgtacaccttcaccacggaggcgacacagggatgcctctccaaggaaaagacgt
tctccatctcctggtggacgtagacgtcgctctccttctcccccacgacgtcgcagatct
ccctctcctcctagacgcaggtctccttccccacctccccgccggcgatctccatccctc
agacgttattctccccctatccagcgtcgctacagcccctcacctttgcctccacagaag
agaaggttttctagctctccctcaaagcgctcttctccaggggcaaagcgacgcccttcc
aggtcccccaagcgcagaagttctcctgctcaaaggaggcgcacacctccttcctccaca
tctccacccagacacaggcgaagccccatgttgccttctgggaggccaagcagggataca
cgatctcctgttgcagcatccagtcgcctctcctcgtcccctgcaaaccgtggtcgcact
gttaggggttccaccagtcctcagggacgttttgaaacctccagtacatccccatgtagc
cagcggagacagtccccttcacacagtggtaaacccatccgtagagtttcccgcaccccg
gagccacgcaacaaccagagaccctctccgagcccccagctaatgaggagagtgtcctcc
agatccagatctgtttctcctcaacaagcagctcagaaacgtcccgcccctgcgtctgcc
tccccctcaccgtctcgctctgccagtgtgtctccgccaccagtcaaaaaggccagcagt
ggctcaggcagtcagtcaccaagcaagaattcagacgttgatggcagtggaaagaaaaag
aaaaagaagaaggagaagaaacacaagaaagagaagaaacataagaagcacaagaagcat
aagaaggagaaaagtggtgctgctgggactggagacggacaagagaaccagggtgtggat
gaggatggagaatcgagaaaggaatcagacagtgaagtagaggacagcttggacgacctg
gagaaacacctaagagagaaggccctgcgctccatgaggaaggcccagatgtctccatca
caaatgtcctga
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