Thunnus thynnus (Atlantic bluefin tuna): 137199303
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Entry
137199303 CDS
T11154
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
137199303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137199303
Membrane trafficking [BR:
tty04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137199303
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
137199303
RAVE complex
137199303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_HPS5
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
137199303
NCBI-ProteinID:
XP_067469606
LinkDB
All DBs
Position
2:complement(27046457..27110063)
Genome browser
AA seq
3121 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLTKLNCQWQKTGQFVLQSMVRNLAW
HPTGSTLLTGSSSLQLWSNVNGVKDEAEEGEKQTELTTRDSHSSWRCIWQSKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSSVSRLYTPPECNVSVQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPGDSLLSGHHNNHTSGQHSD
KLRSAGPSRKNTCNGKTQGRTTQELNFQESWHSPFYRDVPLPSLTGCLPHHQSRHYNHKK
SSSNMPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELHFT
LAMEVFLQQLRGSLEQQSECSHEEPENEDNFDEDDHSSRPNDPQGPEAAELPLAAVEHQV
DVLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDA
ISLSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYGGQGKAAPSSSLRLSIFT
PNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLT
TSHHNALRTPEADNILAPPEACSSGFSHSTSLPRGSRPSRVSLGMISQDPNAIYSELILW
RVDPVGPLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGY
SLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKETQ
LLHVFEEDLILGNERTESAQETPDSAHTASSEPTFSARFFLVVVELTPTGRSLLHMWHLH
LAARPVTMEDTTPEKDASTASSMNSSQFNFETFSSSVTQKSKPCTSNLQSACRLSLTTHR
LYSQEIALPAGVEAISVTPSAGHLSASCSLPTGRVPYLLATSCSDGKVRFWRCNVTETEH
SGMDKLMYQWEEWPLLVEEGIPNCSAVNVQGRPIEVSCCHTGRIAVAYRQTPNTSPNLTP
HLNSHGLLTSPPTLASSPYVHNNNTNTHLTPTLTIQRSASVPPSPYPANTREPLVHISIF
QCESTGGSQWILEQTLVLDSTDPTASYGISNSTTGDTNIPSSNMDFSIPNEHCLGSTSKS
LVHLDWVSQEDGSHVLTVGIGTKIYMYGRLSGKPPELGLSSDVSRDQSLSRLVLLRSVDL
VSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPPKPNVAIVQDTDISSSVSS
IVSAVRQSQEEGLSPGAPMSLLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFE
AAHQLYPTLPQYHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDNTTNPEKRVRS
RTISAGGSTARDRKMFSKAENSTTDYTEISSIPPLPLYALLAADEDTSPKPDKVGSVSGD
SGHGSSHTDAYDELFHTPSMVDLDPLDNDQEETGNKVIDLSQYSPTYFGPEHAQVLSSHL
LHSSLPGLTRMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFL
STSLPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWL
RSTNKLRRCIEKVAKSSFQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTDFFRNNF
SEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYE
SEFETASTYKKILQRHVLGQDKQIPAHHDPFLRSMAHWVLEDYSRALDTLLEQPANSANS
VSTESRSDTGSSSVSTCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSIS
LEERRLFFTAAYAHLQAGCPMLALEVLSKMPKVHKHSKLHNQEDTGIATEHSVGSKNGQT
SDPDWSQPALNGYESGGDSLSNSQSDSVLSFDWSQPSVTLPDEPLELKWDSDKDDEDDED
EEETKNGKSGRTADSSSVFQDTQDAMSPLMEMVTGEDSEDSSDFIAPADDILVAQLKFTA
CLKIMTNELRTLSTGYELDGGKLRYQLYQWLEREVVALQHCCSYKPCLPELSVQGDAPVS
GLVEEEQPGSPRGDSQRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQE
SHQDDSIQSVMTQCSQPTSIPLLMACTANVKTVVANPIVYLTNLTHDILQTINALDSPPH
PDVVNNEIYVMHTLAASLSACIYQCLCDGHTYSHVNHFTGIVYQSVLLSQKQPVRTVSMD
ESVQPNTSPAQWPGIASLIRLLSSAGEESQPGLAVLLCEILTAVFLSLFVHGMATHSSNE
LFRIVAHPLNSKLWVTVFGGGARTPVIQKPNSPTKSPPPASPGNDGSDRKSRRFRLLSSR
SGSREESGIEREGASSPKPGPVVEQEAPSVFKERFVPPELSIWDYFIAKPLLPPSENRIE
YDSEESQGSQDEDEDDEEYEDVFDPNSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYP
MAGYDLLDLPVGSPLCHAVLKTLQRWEQVLQKRLEVFGGPPSKYISTHLQDETATPGPAL
LRHKALLEPSNTPFRTSHHTALPVKRLWQFLVKQEEVQETFIRNIFTKKRDPNESVEDQT
DNMKCSGMDETGNYQTESDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQE
LDVSSILATQILTWIDDDEAEAKSAGSDDFLVVHARDDFAALHGTTPYTHSTPGTPINMP
WLGGLQTGRGASVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSP
GNSRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSS
SLIATAGLSTDNRNVCLWDTLVTPANSLVHAFCCHESGATVLSMAPRQQLLITGGRKGWI
SVLELAHRHQRQSFQAHDSPVKALAVDPTEDCFISGSAEGNIKVWNLATQCPLYTFPNEH
ARQSLFRNLGTGVMQIEVGPTNHIFSCGADGTMKMRILPNRFSVVNNNNHGNLKNDVKFI
I
NT seq
9366 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggttctcacaggggctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacaatgtgccattcacggcctatgcgtctggttgtgatgtggtgattttg
ggcagtgactttgagcgactgcagatcatcccaggggccaaacatggcaatatccaggtt
ggctgtgtcgactgctcgctgcagggaggacagattgcagcttcctatggaagcattgtg
tgtgtttttgagccagttcagcacccagatcaaaaagacacatcgttgaccaagttgaac
tgccaatggcagaagactggtcagtttgttttgcagtccatggtacggaacctggcctgg
caccccacaggtagcactctcttaacaggctctagtagcctccagttgtggtctaatgtt
aacggagtgaaagatgaagctgaagagggagaaaagcagacagaattgaccacaagagac
tctcattcctcatggagatgcatctggcagagcaagacggcctctccggtcagtttaatg
aagttctctcctgatggggaattctttgctactgctggacaggatgattgcctagtaaag
gtttggtacagcaccagtaagtggaagtctagtgtttccagactttacacacctccagaa
tgcaatgtcagtgtccagggagagctggccttttcctttgtctacctggcccatccccgc
tctgttaccggcttctcttggaggaagaccagcaagtacatgccacgaggttcagtgtgt
aatgttctgctcacctgctgtaaggacagcgtgtgtcgcctctgggcagagactctgttg
ccaggtgacagcctcctgtctggtcaccataacaaccacaccagtggccaacacagtgat
aaactgagaagtgctggcccctctaggaaaaacacctgcaatgggaagactcaagggaga
acaacacaagaattgaattttcaagaatcatggcactcccccttttatcgggatgtgccg
ctgccctctttgactggctgcctgccccaccatcagagccgacactacaaccacaagaag
agcagcagtaacatgccccatgccaacgctctctgccacttccacatcgctgccagcatc
aaccctgccacagacattcctctgcttccctccatctcctctctgagtgctgtggatgat
gaggaacctggaggcccttttactgtccactggctcaacaacaaagagcttcatttcact
ttagctatggaagtcttcctgcagcagctccgaggcagcctggagcaacagagcgaatgc
tcccatgaagagcctgaaaatgaggataacttcgatgaagacgatcatagtagcaggcca
aatgacccccaaggacctgaggctgcagagcttcctctcgcagcagtggagcaccaggtg
gacgtgttgttagaggagtggaataaaggggcagacatgttgttcagcatccatcccatg
gacggctccctgttagtctggcatgtggactggttggatgaataccagccaggcatgttc
agacaagctcaggtgtcgtttgtgtcccgtattcctgtagcgtttcctacaggtgatgca
atctccttgagtcacagcgtggttatgtatgcctgcaacaagaatgtagatctggctatc
caacatggcagacagcgaccgcctgggagcacactgcctcaaaccaaatccgctcttatt
agctatggaggtcaagggaaagctgcacccagcagtagtcttcgactaagcattttcacc
cccaatgtgcttatgatctccaaacacgccgatggctctcttaaccagtgggcggtcagc
tttgcagaggactctgctttctccacagtgctcagcgtctcacacaagtctcggtactgt
ggtcaccgtttccacctcaatgatctggcctgtcattccttactccctctcctcctcacc
acctcacatcacaacgccttgaggacaccggaggcagacaacatcctggcgcctccagag
gcctgctcctctggtttctctcattcaacttctctgccccgtgggtcacggcccagccga
gtgtccctgggtatgatttcccaggatcccaatgctatctacagtgagctgattttgtgg
agagtggaccctgtgggtccgctgtctttgtcaggcggagtgtctgagttggctcgaatc
aattctcttcatgcatcagcatttgcaaatgtagcctggctgccaacactcatccccagc
agctgtttaggtgtgtactgtaactctcccagcgcctgcttcgttgcaagtgacggctac
tcccttaggctatatcaggctgttatcgaagccaagaaactcctaagtgagctctccaat
cctgagatatcaaaatatgtcggtgaggtgttcaacatcatcagtcagcaatccacagca
aaaccagggtgtattatagagctggatgccattactgactttcagggaaaggagacgcag
ctcctccatgtttttgaggaggatctgatcctcggcaatgagagaacagagagcgcacag
gaaactcctgattctgctcatactgcctctagcgagccaaccttctcagcacgttttttc
ctcgtggtggtcgaattaaccccgacagggcgctcgctcctccacatgtggcatctccat
cttgctgctcgacctgtcaccatggaggacactacaccagagaaggatgccagcacagct
tcttcgatgaacagctctcaatttaactttgagacgttcagttcctcagtaactcagaag
agtaaaccctgcacttccaatctgcagagcgcctgtcgcctcagcctcacaacacacagg
ctttacagccaggagattgctctgccagcaggtgtagaggccatcagtgttacaccctca
gcaggtcacctcagcgcgtcatgttctctgccaactggccgcgtaccttacctcctcgct
acttcctgttctgatggaaaggtgcgcttctggagatgtaatgtcacagaaacagagcac
tcgggtatggacaagttgatgtatcagtgggaagagtggcctctacttgtggaagagggg
attcccaattgcagcgcagtaaatgtgcaaggtcgcccgatagaggtcagctgctgtcac
actggacggattgcagttgcctacaggcagacaccaaacacatctcctaacctgacacct
catctgaactctcatggactgctgacttctccccctaccctggcttcctccccttatgtg
cacaacaacaacaccaacacccacctgactccgacccttactatacagcgtagcgcaagt
gtccctccaagcccttacccagcaaatactagagaaccactggtccacattagcatcttc
cagtgtgagtccaccggtggttcgcagtggattcttgagcagacgttagtcctggacagc
acagatcccacagctagttacggcattagcaatagcacaactggggataccaatattcca
agcagtaacatggacttctctatacctaacgagcactgtcttggttctactagtaagagt
ctggttcacttggactgggtctcccaagaggatggatcacatgttctgactgttggtatt
gggacaaagatttatatgtacggccgtctctctggaaaacctccagaactcggcctgtca
tctgatgtcagtagagaccaaagcttgtctcgtcttgtcctgcttcgatcagttgatctg
gtctcctctgtcgaaggctctttacccatcccagtctccctctcctgggtacgagatggt
atcttggtagtaggcatggactgtgagatgcatgtctactcccagtggcagcccccagca
ccacccaaacccaatgttgccattgtccaagatacagacatcagcagcagcgtctcctcc
atcgtctccgctgtcagacagagccaggaggagggcctgagtccaggggctcccatgtcc
ttactggcacctcccaaaaaggcccttacgagatcaatgatgagcttggctcagaaactc
agcgggaaaagaacagcttatgacctgccggtagagatggaggattctggactattcgaa
gcagctcaccaactctatcccaccctgccccagtaccacccagtacagttactggagctc
atggatttggggaaggttcaccgtgccaaagccatcctctctcacctggtgaaatgcatt
gctggagaaattgtggctcttaaagacaacaccaccaacccagagaaacgtgtacgttct
cgaaccatcagcgctggaggcagcacggccagggatcggaagatgttcagcaaagcagag
aactccaccacagactacacagagattagctccatccctcctctgcctctgtacgccctt
ctggcagctgatgaggacacatcaccaaagcctgataaagtgggcagtgtgagcggagat
agtgggcatggttccagtcacacagatgcttatgatgagctgtttcatacacccagcatg
gtggacttggaccctctggacaatgatcaagaagaaactgggaacaaggtaattgacctg
tcccagtacagtccaacctactttggtccagaacatgcccaggttctgtccagccatctc
ctccactccagtttgccaggcttaactcgtatggagcagatgtctctcatggcgctggct
gacaccatcgctaccaccagcacagacctcaaggacagccagggcaagagcaaaggtgga
gagacactggatgagtgcggtctgaagttcttgctggctgtgaggctacataccttcctg
tctacctcccttcccccggcacaccgagcacagctgctgcggcaaggcctgtcaacatgt
cattacgcctgggctttccactcagaagctgaagaggagctgctcaacatgctgcctgcc
ctacagaagggagagcccacctggcctgagctgcgctccatgggggtgggctggtggctg
cgcagcaccaacaagctacgcaggtgtattgagaaggttgccaagtcttcctttcagaga
aacaatgatcctctggatgcagcgatattttatcttgcattgaagaagaaggcagtggtc
tggggactgtacagatctcagaagaatgccaaaatgacagactttttccgcaacaacttc
agcgaagaccggtggaggaaagcagcattgaaaaatgccttttctctgttgggaaagcag
cggttccagcactctgcagccttcttccttctagccggctcccttaaggatgctgtggag
gtgtgtttggagaagatgcaggacctacagcttgccctggtgatctccagattgtatgag
tctgagtttgagacagcatccacctacaaaaagatcctccagagacatgtgctgggacaa
gacaaacagattccagcccaccatgatccgttcctgcggagcatggctcactgggtcctg
gaggactacagcagagccttggacactctgctcgagcagcctgctaacagcgccaactct
gtgtctactgaaagtagatctgatactggttcctcttctgtgtccacatgtaatcctgag
gttttcaacttctacacctacctccgtacccacccgctcctcctccgtcgccattttggc
tcctcagacaaggctaaggttggcctgaccgccgagggtcgcagggccgactccattagc
ctggaggagagaagactgtttttcacagctgcatatgcacacctgcaagccggctgccca
atgctagcactcgaggtcctctccaagatgcccaaagtccacaagcattccaaactccac
aaccaggaggacaccggtatcgccaccgaacacagcgttgggagtaagaacgggcaaacg
tcagacccggattggtctcagccagctctgaacggctacgagtcaggcggggacagctta
tccaacagccagtcagattcagtgttgagttttgactggagccagccgtcagtgacactc
ccagatgagcccctggagctgaaatgggacagtgacaaagacgacgaagatgatgaggat
gaagaggaaactaaaaatggtaagagcggcaggactgcagacagcagcagtgtgttccag
gacacgcaggatgccatgtcgccactcatggagatggtgacaggagaggacagcgaggac
agcagtgacttcatagcacccgcggatgacatcttggtggcccagctgaagtttaccgcc
tgtttgaagatcatgaccaatgagctgaggacgctttcaaccgggtatgaactggatgga
ggaaagcttcgttaccagctttaccagtggttagaaagagaggtggtggctctccagcac
tgctgcagctacaagccttgcttgccagagctgtctgtccagggtgatgcccctgtctct
gggttggtggaggaggaacagcctggaagcccacgtggtgacagccagagaagcaggaga
cactggctgcagagtaaccagcccttactgaggatgtttctgagctactgtagcttgcac
gggtcacacggcggaggactggcctctgtacgcatggagctcatattactgcttcaggag
tctcaccaggacgactctatccaatcagtgatgacgcagtgttcccagcccacctctatc
cctctcctgatggcttgcacagccaacgtaaagaccgtggtggccaatcccatcgtctac
ctgaccaacctgactcacgacatcttacagaccatcaatgcactagactctcctccacat
cccgatgttgtcaacaatgagatctacgtgatgcacacgttggctgcctccttgtctgcc
tgtatatatcagtgtctgtgtgatggacacacatacagccatgtgaaccatttcacaggg
attgtatatcagagtgtattgctgtcccagaagcagccagtcagaacagtcagcatggat
gagtctgttcagcccaacacttctcctgcacagtggccaggtattgcctctctgatccgt
ctcttgagctcagcaggtgaggaaagtcaaccaggcttagccgtgctgctctgtgagatc
ctcactgctgtcttcctcagtctgttcgttcacggcatggccactcactccagcaacgag
ctgtttcgcatcgtggcccatcccctcaacagcaaactctgggtgacagtgttcggagga
ggtgcccggacccctgtcatacagaaacccaacagcccaacgaaatcacccccgccagct
tcaccgggcaacgacggctcagacaggaagtccagacgattcaggctcctgtcatcacgc
agcggatcgagggaagagtccgggatagagagggagggcgcgtccagtcccaagcctgga
ccagttgtggaacaggaagctccctccgtctttaaagaacgttttgtccctccagagctc
agcatttgggattactttatcgccaagccgttgctgccaccgtcagaaaacagaattgag
tacgactcggaggagagccaaggcagtcaagatgaagatgaagatgatgaggaatatgaa
gatgtgtttgaccccaattctccacaaagagagcactctaaccacaattcatacagttgg
tgtttaatgcgcctggcaatggttcagctggtgctggtcaacctcaagtccttctacccc
atggcaggatatgatctattagatctgcctgtgggctctcctttgtgtcacgctgtgctg
aaaacgctgcagcgctgggagcaggtgctgcagaaaagactggaggtcttcgggggcccc
ccttccaagtacatctccacacacctgcaggatgaaacagccacacccggccccgccctc
ctcagacacaaggccctgctggagccgtccaacacgcccttcagaactagccatcataca
gcactgccagtgaagcgtctgtggcagtttctggtcaagcaggaggaagtgcaggagact
ttcattagaaacatctttaccaagaaacgggacccgaacgagtcggtcgaggaccagact
gacaatatgaaatgttcagggatggacgagacaggaaactatcagactgagtcagatcta
ggcagccccggaggaaaggcacgcatcatccacaaggaatctgacatcatcacagccttt
gccatcaacaaggcaaatcgtaattgtttagtcatggcctccacccatgacattcaggag
ctggatgtgtcatccatcttggctacacagatcttgacatggatcgatgacgatgaggct
gaagccaaaagtgctggcagtgatgacttcctggtggttcatgcacgcgatgactttgcc
gccctccacggcaccacaccgtacactcacagtacccctggcacacccatcaacatgccg
tggctgggaggcctgcagacgggccgaggagcatccgtgatgatcaagagaaatatcaac
aatgtgagaagaatgacctcccatcccacactgccatactacctgacaggagctcaggat
ggaagcgtgaggatgttcgagtggggtcattcccagcagatcatttgcttcagaagtcca
gggaactccagagtcaccaggatacgattcaaccaccaaggaaacaagttcggtatcgta
gatgctgatggaggtttgagtctctggcagaccaacacaagtgggaacgcaccaaaacct
tatctgacgttgcagtgccacaacaagacagctcatgactttgtcttcgtgggctcctcc
tctctcattgctactgcgggcctttcgacagacaacaggaacgtgtgtctgtgggacact
ctggtgactcctgcgaacagccttgtacatgctttctgctgccatgagtcaggtgctacc
gtgctctcgatggcccccaggcagcagctgctcatcacaggtgggaggaagggctggatc
agtgtcctggagcttgcccacaggcaccagcgtcagagcttccaggcccacgactcgccg
gtcaaagcgctagccgtcgatccgactgaagactgcttcatcagtggatcagctgagggc
aacattaaggtttggaacttggccacgcagtgtccgctctacacctttccgaacgaacac
gctcgccagtcgctgttcaggaacctcggcacgggtgtcatgcagatcgaggtgggaccg
accaatcacatcttctcctgcggcgccgacgggaccatgaagatgaggatcctccccaac
cgtttcagtgttgtcaataacaacaaccacggcaacctcaagaacgacgtcaagttcatc
atatag
DBGET
integrated database retrieval system
