KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137199526
Entry
137199526         CDS       T11154                                 
Name
(RefSeq) histone deacetylase 1-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03082  ATP-dependent chromatin remodeling
tty03083  Polycomb repressive complex
tty04110  Cell cycle
tty04330  Notch signaling pathway
tty04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tty00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137199526
   03083 Polycomb repressive complex
    137199526
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    137199526
   04350 TGF-beta signaling pathway
    137199526
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    137199526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tty03036]
    137199526
Enzymes [BR:tty01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     137199526
Chromosome and associated proteins [BR:tty03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     137199526
   HDAC complexes
    Sin3A-HDAC complex
     137199526
    BRAF-HDAC complex
     137199526
    REST complex
     137199526
    SHIP complex
     137199526
    MiDAC complex
     137199526
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     137199526
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137199526
  Chromatin remodeling factors
   NuRD complex
    137199526
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 137199526
NCBI-ProteinID: XP_067469968
LinkDB
Position
16:complement(21379754..21385732)
AA seq 490 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDTSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAIQEDSGDEEEDDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNAASFKKAKRAKTEGEKEGEEKEKKGEEEKKEVKEEEKVPEEEKMDT
SKPKEESKTP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcgcttacttctcaaggaacaaagaaaaaagtttgctactactatgatggtgatgtt
ggaaattattactatggtcaaggccatcccatgaagccccaccggatccgcatgacacac
aacctgttgctcaactatggcctctacagaaagatggagatatatcgtccacacaaagcc
agcggagaggagatgaccaagtatcacagtgatgattacattaagttcctgcgttccatc
cggccagacaacatgtcagagtacagcaaacagatgcagagatttaatgtgggggaagat
tgtccagtgtttgatggtttattcgagttctgccagctctcaggagggggctccgttgct
ggtgctgtgaagttgaacaaacagcagacagacatagctattaactgggctggaggcctg
catcacgccaagaagtctgaggcctctggattttgctatgtcaatgacatcgtattggct
attctggagttactgaaataccaccagagagttctgtacattgatatcgacatccatcat
ggagacggtgtagaggaggccttctacaccactgaccgtgtcatgacagtttccttccac
aagtatggagagtacttccctggcactggtgacctgagggatattggtgctgggaagggt
aaatactacgctgtgaattacccactgagggatgggattgacgatgagtcatatgaagcc
atattcaagcctatcatggccaaggtgatggagatgtaccagcccagcgcagtggttctg
cagtgtggagctgattcactgtcaggagacagacttggctgttttaatctcaccattaaa
ggccatgccaagtgtgtggagtacatgaaaagcttcaacctgccgctactaatgctgggt
ggaggaggctacaccatccgcaatgtggcgcgctgctggacctacgagactgctgtagct
cttgatacctccatccccaacgagctcccatacaacgactactttgagtactttggacca
gacttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcaacgtctgtttgagaatttgcgtatgctgccacatgccccaggagtg
cagatgcaggccatcccagaggatgccatacaggaggacagtggagacgaggaggaggac
gaccccaacaaacgcatctccatccgtgctcacgacaagaggatagcgtgtgaggaggag
ttctctgactcagaggatgaaggcgaaggaggccgtagaaacgcagccagcttcaagaaa
gccaagcgagccaagactgaaggagagaaagagggagaagaaaaggagaagaaaggtgag
gaggaaaagaaagaagtaaaagaagaagaaaaggtgccggaagaggagaaaatggacaca
tcaaagccaaaagaggagtccaagacaccttga

DBGET integrated database retrieval system