Thunnus thynnus (Atlantic bluefin tuna): 137199794
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Entry
137199794 CDS
T11154
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137199794
Transcription factors [BR:
tty03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137199794
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
137199794
NCBI-ProteinID:
XP_067470441
LinkDB
All DBs
Position
16:complement(2066496..2439841)
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AA seq
1073 aa
AA seq
DB search
MIRIFPDFSVQVTASAAGGAVGGGGGGGGGGGMVTGPPVGRVPVPVPGATNGTPQSVQGI
TAYQQSDPYWERPANAGSCAAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKEN
FEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVK
AIGSQRRRSPTVVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVE
LTGSSVFDYIHPGDHVEVAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVE
SSSPSLLAPDNTLERSFFVRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPN
QIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRC
YQFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNI
IWVNYVLSNPEYKDTPIDIAQLPNLPEKTSESSESSDSESESKENSDNENAKPEGKSGHQ
SERSEDPEADSKRQQQPGQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEAEEQE
EVRGGGGGGGGGGSGGRLGRLTGLGGLGGLSAIGGLGNLGGLHIKVEHYGEGEEVQLHNS
QTSSSEEEEEEDEDDDEEEDGSVQDCDSANPGNKHQKRRKRRKVQKWDGTRSRRLRLSST
TPSPVAMGDTTPLVDPSQGASSASSHLLTSSSGSPNAAATSSVLKIKTEMAEPINFDNDS
SIWNYPPNREISRNESPYSMTSKPAAPGTHETFPSPQGGSLQVAIPDSVLTPPGTEGGAG
GVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSSSSTS
SSSSSSSSTPSSSLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTSTTAPRVYTTGTIR
YAPADVTLAMAQGNLLPNGAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVG
SPAATGGNGALGGQMPTAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacagcctcggctgccggaggagcc
gtgggtggaggcggaggaggcggcggaggcggtgggatggtgaccggacccccggtgggt
cgggtgccggtgccggtccccggagccacgaacgggaccccgcagagcgtgcagggaatc
accgcctaccagcaaagtgacccctactgggagcggccggctaatgcaggcagctgtgcc
gccgcccggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctg
caggctctgaggaaggagaagtcaagggacgcggcgcggtcgcggcggggaaaggagaac
tttgagttttacgaactggccaagatgttgccgctgccgggcgccatcaccagccagctg
gacaaggcctccatcatccggctcaccatcagctacctgaagatgagggacttcgccaac
cagggagacccgccgtggaacctgcgcattgagggaccgccgcccaacacctctgtcaaa
gctatcggtagccagcggaggaggagtcccaccgttgtcgcctcagagatcttcgaacct
cacctgggcagccacatcttacagtctctggacgggtttgtatttgcactaaacaaggag
ggacgtttcctctacatctctgagaccgtctccatctacctgggactgtcacaggtggag
ctgaccggcagcagcgtgtttgactacatccatcccggcgatcacgtggaggtggcagag
cagctcggcatgaagcttcctccgggccgagggatgtctctctcccagggagccgtcaac
gaagacggggcgtcctcggcttcatcgtcgtcgcactccgagacgcccgaaccagtggag
tccagcagtcccagtcttctggctcctgataacactctggagagatccttcttcgtccgg
atgaagtcgacgctcacaaagagaggagtgcacatcaagtcctcaggatataaggtgatc
cacatcacggggcgtctgcggatcaggatggcgctcacgcacagccgctcggtgcccaat
cagatcatggggatggtggtggtggctcacgccctcccgccgcccaccatcaacgaggtt
cgcatcgactgtcagatgttcgtcacccgagtcaacatggacctcaagatcgtctactgc
gagaacaggatcagcgactacatggatctgactccagtggacatcgtggggaagaggtgc
taccagttcattcatgccgaagacgtggagggaatcagacagagtcacctggacttgatg
aataagggtcagtgtgtgacgaagtactaccggtggatccagaagaacggcggttacatc
tggatccagtccagcgccaccatcgccatcaacgccaagaacgccaacgagaagaacatc
atctgggtcaactacgtcctcagtaatccagagtataaagacacgcccatcgacatcgct
cagctgcccaacctaccagagaaaacctctgaatcctccgaatcgtccgactctgaatcc
gagtccaaagaaaactcagacaacgagaacgccaagccagaggggaagtcaggccaccaa
tcagaacgcagcgaagacccggaggctgacagcaagcgtcagcagcagcccggccaaccg
cactgctcctccgaacaggaaatgaaacgccaggaagaaggagacagctccagtaacccc
gagagtcaggacagtgacgacagcctggagccttcagacggagaggctgaggagcaggag
gaggtcagaggaggaggaggaggaggaggaggaggaggaagtggaggcaggttggggagg
ttaacaggactgggtggattagggggactgagcgccatcggaggactgggtaatcttggt
gggcttcatattaaagtggagcattatggagagggggaggaagttcagctgcacaactcg
caaacttcttcgtcagaggaggaggaagaggaggatgaggacgatgacgaggaagaggat
ggaagtgtgcaggattgcgacagcgccaatcccggaaacaaacatcagaagaggcggaag
aggaggaaagtgcagaaatgggacgggacccggagcaggaggctccgcctctcctccacc
acgcccagccccgtcgccatgggagacaccacgccgctggtcgacccctcacagggtgcc
tcctccgcctcctcccacctcctcacctcctcctccggctccccaaacgcagctgcgaca
tcctcggtcctgaaaatcaagacggagatggcagaaccgatcaatttcgacaacgacagc
agcatctggaactacccgcccaacagagagatttccagaaacgagtctccgtacagcatg
acctccaagccggctgctccggggacccacgagaccttcccctcaccccagggaggctct
ctccaggtggctatccccgactccgtcctcacccctcctggaaccgagggaggagcggga
ggagtgaggaagcctccttacaacgggagctcagctccgtcttctgcttccagcgctgcg
agtctagctcctccctccagcgcctcctctgcggaccccttgtcccctcctctctccgct
tccccacgggacaagcaacaaggcacgcccaccacctcttcctcttcttcttccacttct
tcatcctcttcctcgtcctcatcaaccccttcctcttcactgctgtactccggtgatctc
gaggcgctgcagcgcctgcaggcgggtaacgtcgtgctccctctggtccaccgggtcacg
gggactctggcgtccaccagcacgacggctccacgggtctacaccaccgggaccatcagg
tacgcgccggcggacgtcaccctggctatggcacaaggcaacctcctccccaacggcgcc
atgaactttgtcgacagctcggggttcggcctggacccgaagacgcccatggagatgctc
taccaccacgtccacaggctcaacatgtcggcagcggcggccgccggaccgttcgtcggc
tccccggcggctacgggaggaaacggcgccctgggaggccagatgccaacggcggccaac
gttttcaccacggcggagggacttttctcgacgctaccgttcccggtgtacagcaacggg
atccacaccacgcagacaactctggagaggaaggaggattaa
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