Thunnus thynnus (Atlantic bluefin tuna): 137200121
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Entry
137200121 CDS
T11154
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
tty04519
Cadherin signaling
tty04520
Adherens junction
tty04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137200121
04519 Cadherin signaling
137200121
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
137200121
04530 Tight junction
137200121
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Ortholog
Paralog
GFIT
Motif
Pfam:
AFDN
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
137200121
NCBI-ProteinID:
XP_067470903
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All DBs
Position
16:complement(8428649..8442791)
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AA seq
1283 aa
AA seq
DB search
MPEEKEREELAKVIRQWNNNRLDLFEISQPDESLEFHGVMRFYFEDHVGDNVATKCLRVC
SSSSTREVIETLSEKFRPDLKMLSTCYCLYEIHTSKERKLDLDERPLVVQLNWNSDNREG
RFVLKKDKESLEENCHEKEKGGVIQNFKRTLSRKEKKKEKNTIKATDEATGDENGSTEKP
LNNTNICVSNPETKKWSTEYKKQQQSQADPGVKHTGSLHPDFLDQPGLPLGIKFCDNCEY
EIKYFVSCELSDLPSHNVLLPPAGVFYISAEEAFLSAVINYTNSSTVHFKLSPAYILYAV
GRFALQRWGSPPSGKTHGVTSIANKMVAMTGKVIQLTMTVKTVHLCMDIKYCKVTSSVST
FAFQRQQAIAGALAFWMANSSELLNFLKHDKDLGPLTQQSQLDLSHLVHKAYSCLIQCLQ
NELRKHLPTFLIDPEQHGPLPAGIELVLNTLMNTMSLLRRCRVNPALTIQLFSQLFHFIS
TWLFNQLMGPEADTPGLRSHYWGAALRQRLTAIEAWAERQGLELAADCHLGHIIQATMLL
TMKKYSMQDAKDIQNTCFKLNSLQLQTLLAGYLYATNEPHIPPDLINAVVTAAEASADNL
IRSEGRDIQLQESLDLHLPFLLPEGGYSCDTVRGIPPGFGEFLEPIYRKGLCSLTSQPNS
KGDWTVYFSESTSSAGTTYMAVQREPEIVTITLKKPLNSGMGVSIVAAKGAGQDNLGIYI
KSIVRGGPAEMNGKLTAGDQLLSVDGRSLVGLSQERAAAIMVQTGPVVTLQVAKFGASYH
GLGALLNEPTPERTAGDKSHAKPNSNALMLHSVLDPGHSEQLESLHGSSRRKKDQIMQRN
RELYRSNPNMTTHFVLEDEAEPVDPVVRGNNIAAVSTINLCTDTFHREYLTLPNPKSQDK
NISESSRPQQMFKVSLRPLDGQNSSDKRTFMRQALSQENLCVDNGGPLLDKRQNMWQNQS
AKQTMSHYSSFPIRPSFSSHDILSDNSSPTKRQQETRTSGAGVWRTPFSQHPTPTPSIQP
SIRIDIPVTRAASVQSNPPLTTFQQSSSLLAVKKSQTLKVHGQTSQAGQKQSPQTQAYEI
YACPISATKKLPQPSLLTQQQRPGAHGGQAAKPQVSITPTKHVSFQEPPTQQKQGTGPMR
QKDLQELSDPWRREAQEKLEKQQRLQVVELLEQEVQELQAKEKRTVEENDRLRKLSLEWQ
FQKRLQEVQQRGEDEEEDEDLDMMMMIQQLERRVQNKRSSEGKVISELKEQTGSLLSQKE
EKAKTDQRPIGRTQDVNNMASKE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggaaaaggaacgagaggaattagccaaagtcatcagacagtggaacaacaac
agactggacttgtttgaaataagccaacctgacgagagcctggagtttcatggcgtgatg
cgtttctactttgaagatcacgttggagacaatgtcgccacaaagtgcctgcgtgtttgc
agcagctcttccactcgtgaggttattgaaactctttcagagaaattcaggcctgatttg
aaaatgctgtcaacttgttactgtctgtacgagatccacaccagtaaggaacgtaaattg
gatctggatgagagacctttggttgtacaattaaactggaactccgacaacagagaagga
cgttttgtactcaagaaggacaaggagagtttggaggaaaactgccacgagaaggaaaag
ggaggcgtgattcaaaacttcaagaggacactgtcaagaaaagaaaagaagaaagagaag
aatacaattaaagctactgacgaggctacgggagacgagaacgggtcaactgaaaagcca
ctgaacaacaccaacatttgtgtgtctaaccctgagacaaaaaagtggagcacagaatac
aaaaagcaacaacagagtcaggctgaccctggggtaaaacacacaggaagtcttcatcct
gactttttagatcaacctggattaccacttggaattaaattctgtgataactgtgagtat
gaaattaaatactttgtcagttgtgagctcagtgaccttccttctcataacgtcctcctg
ccccctgctggtgtcttctacatttcagcggaggaagccttcctgtctgcagtcataaat
tacaccaacagctccacagttcatttcaagctgtcacctgcgtacatcctctatgccgtg
gggcgcttcgctctgcaacggtggggctccccaccgtcaggaaagacacacggcgtaacc
tcgatcgctaacaaaatggtggccatgacagggaaggtcatccagctaactatgactgta
aaaactgtacacctgtgcatggacataaagtactgtaaagtcacatcttctgtgtctaca
tttgcctttcagaggcagcaggccattgccggcgctcttgccttctggatggccaactcc
tccgagctgctaaacttcctcaagcacgacaaggacctcggcccgctcacccagcaaagt
cagctggacctgtcccacctggtgcacaaagcttacagttgcctgatacagtgtctacag
aatgagttgagaaagcatttgccaacttttttgattgatccagagcaacatggcccactg
ccggcgggtatagagctggtgctgaacaccttgatgaacaccatgtctctgttacgccgc
tgtcgggtcaaccccgccctcaccatccagctcttctcccagctcttccatttcatcagc
acctggctcttcaaccagctcatgggcccagaggccgacactccgggcctgcgctcccac
tactggggagcggctctccgccagaggctgaccgccatcgaagcctgggcggagaggcag
ggcctggagctggctgctgactgccacctgggacacatcatccaggcaaccatgctcctg
accatgaaaaagtactcaatgcaagatgcgaaggacatccagaatacctgtttcaagttg
aattcactgcagctgcagacgttgctagccggctacctctacgcaaccaatgagcctcac
atcccccctgatttaatcaatgccgtagtgacggccgcagaggcctctgcagataacctg
attcggagcgaaggacgggacatccagctgcaggagagcctcgacctccacctgcccttc
ctgctgccggagggaggatactcctgtgacactgtgagagggatccccccagggtttgga
gaatttttggagccaatttaccggaaaggtctctgctctttaacttcccaaccgaactcc
aaaggcgactggactgtttactttagtgagtcgacttcctctgcaggaactacatacatg
gcagtacagagagagccagagattgtgactatcacactgaagaaacctctcaacagtggg
atgggggtcagcattgtggctgccaagggagcagggcaagataatctcgggatttatatc
aaatctattgtcaggggaggaccagctgaaatgaacggcaagttaacagctggggatcag
ctgctgagtgtggacggtcgaagcctggtcggcctcagccaggaaagggcagcagctatc
atggtgcaaaccggccccgttgtgaccttacaggttgcaaagtttggagcgagctatcac
ggcctcggggctctgctgaacgaaccaactcctgaaagaactgcaggtgataaaagccat
gctaagccaaacagtaatgcactcatgctgcacagcgttctggatcctggtcattcagag
cagctggagagtctgcatggaagcagcagaagaaagaaagaccagataatgcagcggaac
agagagctttatcggtccaaccccaacatgaccacgcactttgtcctcgaggatgaagct
gaacctgttgacccagttgtgagagggaacaacattgctgctgtttccactatcaacctt
tgcactgatacatttcacagggaatacttgactcttccgaatcctaaatcccaggataag
aacatatctgaatccagtcgaccacagcaaatgtttaaagtgtctttaaggcctttagat
ggacagaactccagtgataagaggaccttcatgcgtcaagctctctcacaggagaacttg
tgtgtggacaacggaggccccctgctggacaaaaggcagaatatgtggcagaaccagagt
gcaaagcaaaccatgagccactattcgtccttcccaatccgcccgagcttctcctctcat
gacatactttctgataacagctctcccacaaaacgacagcaggaaactcgcacaagtggc
gccggagtctggagaactcccttttcacaacatccaacacctacaccttcgatccaacct
tcgatacgcatagacatccctgtgaccagagcggcgagcgtgcagtcgaatcctcctctc
accaccttccagcagagttcctctctgctggcggtgaagaagagtcaaacgcttaaagta
catggacaaacaagtcaagcggggcaaaaacagagtcctcaaacccaagcgtatgagatt
tatgcatgtcccatttctgcaactaagaagctacctcagccctcacttctaacacagcag
caacgaccgggcgcacacgggggtcaagcagcaaaaccacaagtgagcatcactccgaca
aaacacgtctccttccaagaacctcctactcaacagaagcagggaacgggtcccatgagg
caaaaggacctccaggagctgtctgatccatggaggagggaggcccaggagaaactggag
aagcagcagaggcttcaggtggtggagctcctggagcaggaggtgcaagagcttcaggct
aaagagaagcgcacggtggaggagaacgaccgactccgcaagctcagcctggagtggcag
tttcagaagaggctgcaggaagttcagcagagaggagaggatgaggaggaagacgaggat
ttggacatgatgatgatgatacagcagctggagagaagagtacagaacaagagaagttct
gaaggaaaagtgatcagcgaattgaaagagcagacaggaagtcttctctcccaaaaggaa
gaaaaggcaaaaacagatcaaagaccgattggacggactcaagacgttaacaacatggca
tcaaaagagtga
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