Thunnus thynnus (Atlantic bluefin tuna): 137200264
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Entry
137200264 CDS
T11154
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04137
Mitophagy - animal
tty04140
Autophagy - animal
tty04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137200264 (hif1aa)
04137 Mitophagy - animal
137200264 (hif1aa)
04148 Efferocytosis
137200264 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137200264 (hif1aa)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137200264 (hif1aa)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
137200264
NCBI-ProteinID:
XP_067471037
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Position
16:complement(16706775..16724370)
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AA seq
755 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LIISYLRMRKLLSTDEPVAEEETELDIQLNSSYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRLYDSHTEQTPNGHKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
TTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLIMSLEQTEDV
KPVKEEQQEEEKAVVEISQPDMSPILQKEEEKAPELDVVKLFTQAADAKPLVSLYDQLKE
EPEALTLLAPAAGDTIISLDFGCPDSEIQLLKDVPLYNDVMLPSTSDKLALPLSPLPPSE
PLHVTTTASEDTKTESFAPTPSTTSTSQSPSEPDSPLDFCFPIESDMSSDFKLDLVEKLF
AIDTQPKTPFTKQAIDDLDLEMLAPYIPMDDDFQLRSLTPDEPLSCGPVKSLESSPLHVA
QEVPSYPNSPFSSPGSQTSSPAPPEPVNPPNLATIIAKRTPQLDKEVSLRTLAAQNAQRK
RKLGDIREIFGNGSLQEQLEQGKKLKASDSGTTRTILLLPSDLASRLLGSTSEGTSSPFT
LPQLTRYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgagttcggagcggaggaaggagaag
tcaagggatgctgcgcgatgccggcgcgggaaggagtcggaggtgttctacgagctggcc
caggagctgccactgccccacagtgtcagctccagtctggacaaggcctccatcatgaga
ctcatcatcagctacctgcgcatgagaaaacttcttagcactgatgagccagtggcagaa
gaggaaacggagctggatatccaactaaacagctcctacctaaaggctctggaaggcttt
ctcatggtgctgtctgaagacggagatatgatctatctctctgagaatgtcaacaagtgc
ttggggctggcacagtttgacctgactggacacagtgtgttcgacttcacacatccctgt
gaccaggaggagctgagggagatgctggttcacagaacaggctccaaaaagaccaaggaa
caaaacacagagcgcagcttcttcctccgaatgaagtgcactctcacaagcagaggccgc
actgtcaatgtcaagtcggctacatggaaggtgctccactgctcaggtcatgtgcgctta
tatgacagccacactgagcagactcccaacggccacaaggagccacctgtcccttacctg
gttttgatctgcgaccccatcccacacccctccaacattgaggtccctctggacaccaag
acctttctcagccgccacacgatggacatgaagttcacatattgtgatgagaggatcact
gagctgatgggttacgatccagaggacctgctgaatcgttctgtgtatgagtactatcat
gctctagactcagaccatctcaccaagactcaccacaacttgttcgcaaagggccaagtc
accacaggccaataccggatgttagccaagagaggaggctttgtgtgggtggaaacccag
gccactgtcatctacaacaacaagaactctcagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaaactgatcatgtctctggagcagaccgaggatgtg
aagccggtgaaggaggagcagcaggaagaggagaaggctgtggtcgagatcagccagcca
gacatgtcaccgatcctgcagaaggaggaggagaaggccccggagctggatgtggtcaag
ctgttcacccaggcggctgatgccaagccgttggttagcctgtatgatcagctgaaggaa
gagcctgaggcccttaccctgctggccccagccgccggagacacaatcatctccctggac
tttggctgccctgattcagagatccagctgctgaaggatgtccctctctacaacgatgta
atgcttccctccaccagtgacaagctggctctgcctctttcccctctgccgcccagtgag
cctctccatgtcaccaccaccgcctctgaggacacaaaaactgagagctttgctccaacc
ccgtccaccacatcaaccagccagagcccctcagagcctgacagcccattggacttttgt
ttccccattgagtcggatatgagctcagatttcaaactagacttggtggagaagctgttt
gccattgatacacaacccaagacacccttcaccaaacaggcaatagacgacttggatctg
gagatgttagcaccctacatccccatggatgatgacttccagctgcgcagtttgacccca
gatgagcctctttcttgtggaccagtcaaatccctggaaagctctcctctccacgtcgca
caggaagtccccagctatcccaactcccccttcagctcaccaggcagtcagacctcttcc
ccagcaccacccgaaccagtaaacccccctaatcttgccaccatcattgctaagaggacc
ccacagttggacaaagaagtctccctcaggactctggcagcccagaatgcacagcgcaaa
agaaaactgggtgacataagggagatatttggaaatggatctttgcaggagcaactggag
cagggcaaaaagctgaaggcctcagactccggcacaaccaggaccatacttctgctgcct
tcagatttggcgagtcgtctgcttggcagcacgtcagagggcaccagttcccccttcacc
ctgccacagctcacccgctacgactgcgaggtcaacgcccccttacagggtcgccagtac
ctgctgcagggggaggagctgctgcgcgctctggaccatgtcaactga
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