Thunnus thynnus (Atlantic bluefin tuna): 137200830
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Entry
137200830 CDS
T11154
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137200830 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137200830 (ddx5)
03009 Ribosome biogenesis [BR:
tty03009
]
137200830 (ddx5)
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137200830 (ddx5)
Spliceosome [BR:
tty03041
]
Complex A
U1 snRNP components
U1 related factors
137200830 (ddx5)
Complex B
137200830 (ddx5)
Ribosome biogenesis [BR:
tty03009
]
Eukaryotic type
Pre-60S particles
Helicases
137200830 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137200830
NCBI-ProteinID:
XP_067471588
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Position
17:complement(22858519..22864580)
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AA seq
625 aa
AA seq
DB search
MPGYADRDRGRDRDRDRDRGYGGGPPRFGGNRGGSGGGGGKFGNPGDRLRKKHWNLDELP
KFEKNFYQQHPDVARRGLQEVEQYRRSKTITVKGRDCPNPIQKFHEASFPSYVMDVINKQ
NWSEPTPIQAQGWPLALSGNDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV
LAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL
EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED
FLKDYVQINVGALQLSANHNILQIVDVCSDGEKENKLIRLLEEIMSEKENKTIIFVETKR
RCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKF
VINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNVRQASDLISVLREANQAINPKLL
QMAEVRGGRSRGGRGGDYRDDRRDRYSSGRRDFGSFRDRDSGRGFDNGPNKAFGTNSQNG
GYGGNNSGSNGFSGGSYNGNGQSNFNSQTGSFGGQNNFQPPQFAPGKGGAQNGASHPPFP
FPQAQAPQHPPPPLVPYPMPPQFTQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccaggatatgccgacagagatcgtggcagagaccgggacagagatagagacagaggc
tatggcggcggtcctcctcgctttggtggcaaccgtggtggtagcggcggcggcggaggg
aagttcggtaatcccggcgatcggctgcggaagaagcactggaacctggacgagctccct
aaatttgagaagaacttttatcagcagcatcccgatgttgcccggaggggtctgcaagaa
gttgaacagtacaggaggtccaaaacaattacggtgaaggggagagattgcccaaatcca
atccaaaagttccacgaggccagctttccctcctatgtgatggatgttatcaacaaacag
aactggagtgaaccaacacccatccaggctcagggctggcctctggctcttagcggcaat
gatatggtcggcattgcacagactggctctggcaagacgctttcttatctgttgcctgca
atcgttcacatcaaccaccagcctttcctggaacgtggagatggtcctatttgcttggtg
ctggccccgacccgtgagctggcacagcaggtgcaacaggtggccgcagaatatggcaga
gcttctcgcctcaagtccacctgtatctacggaggagcacctaagggaccccagatccgt
gaccttgaaagaggtgtggagatctgcatcgccaccccaggcaggctcattgacttcctt
gaagcaggaaagacaaacctgcgtcgttgcacttatcttgtgctggatgaggctgacaga
atgctggacatgggctttgaaccacagatccggaaaattgtcgaccaaatcagacctgac
cgtcagactctgatgtggagtgccacttggcccaaagaggttcgccagctggcggaggat
ttcctgaaggactatgtgcagatcaatgttggtgctctgcagctcagtgccaaccacaac
atcctacagatagtggatgtctgcagtgatggagaaaaggagaacaaactcatccgtctg
cttgaggaaatcatgagtgagaaggaaaacaagaccatcatctttgttgagacaaagagg
cggtgtgatgaccttaccaggaggatgagaagggacgggtggccagctatgggaatccat
ggagataaaagccagcaggaaagagactgggttctcaatgagttcaaatatggaaaggct
ccgattctcattgctacagatgttgcctccaggggtctagatgttgaagacgtgaaattt
gtcatcaactttgactaccccaacaactctgaggactatatccaccgcattggcagaaca
gcacgtagccaaaagacaggcacagcctataccttcttcactccgaacaacgtgaggcag
gccagtgacctcatctctgtgctccgcgaggccaaccaggcaatcaaccccaagctcctc
caaatggcggaagtcagaggagggcgttcaaggggcggcagaggtggtgactacagagat
gaccgccgggataggtattcctctggaaggcgtgattttggcagttttagggaccgggat
agtggtagaggttttgacaacggaccaaataaagcctttggcacaaattcacagaatgga
ggctatgggggcaataacagcggctccaatggtttcagcggaggcagctacaacggtaac
ggacagtccaactttaacagccaaacaggatccttcggaggccagaacaacttccagccc
ccacagttcgcccctggtaagggtggcgcacagaacggtgcaagtcatccccctttcccc
ttcccccaggcacaggctccgcagcatcctcccccaccgctggtgccgtaccccatgcct
cctcagttcactcagtaa
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