Thunnus thynnus (Atlantic bluefin tuna): 137200956
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Entry
137200956 CDS
T11154
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03015
mRNA surveillance pathway
tty03040
Spliceosome
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137200956 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
137200956 (alyref)
03015 mRNA surveillance pathway
137200956 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137200956 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137200956 (alyref)
03041 Spliceosome [BR:
tty03041
]
137200956 (alyref)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137200956 (alyref)
TREX complex
137200956 (alyref)
Spliceosome [BR:
tty03041
]
Complex C
Other components
EJC/TREX
137200956 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137200956 (alyref)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
137200956
NCBI-ProteinID:
XP_067471812
LinkDB
All DBs
Position
17:complement(19024391..19027475)
Genome browser
AA seq
272 aa
AA seq
DB search
MTDKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGGRGGGPGRLGVGGGGFGGRGGGS
GPMRNRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLL
VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGI
PLDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRNRGGGGFGGMQRGRGGRGAGGARGR
GRGGRGGNSKQQLSAEELDAQLDAYNARMDTS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaaatggatatgtctctagacgacattatcaagcagaacaggcagcagaga
ggcggaggccggggtggaagaggtcgaggccgcggaggctccggcggtggcggcagagga
ggaggccccgggcgtcttggagtcggcggtggagggtttggaggccgaggcggcggatcc
ggccccatgaggaaccgccagaacctgagccgcgctagaggcagaccgacgccgtacagc
aggcctaaacagcttccagataagtggcagcacgacatgttcgacaacggcttcagcggc
ttcaatggtgctgctgggggtggcggcggagctggcgtggaaactggagggaagctactt
gtctccaatctcgactttggggtctcagatgcagacattcaggaactttttgcagaattc
gggacactgaaaaaggctgcagttcattatgaccggtccggaagaagcttgggaaccgca
gatgtccacttcgaaaggagggcagatgctctcaaggccatgaaacagtacaatggcatc
ccacttgatgggcggcctatgaacatacagctcgtcacatcacagattgacacacagagg
cgacctatgcagggtctgaacagaggtggtggaggcatgaacagaaatcgtggaggcggt
ggtttcgggggcatgcagagaggccgcggcggacgcggtgcaggcggtgccagaggaagg
ggtcgaggtggccgcgggggtaacagcaagcagcagctgtcggcagaggaacttgacgcc
cagttagacgcctacaatgccaggatggacaccagctaa
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