Thunnus thynnus (Atlantic bluefin tuna): 137201163
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Entry
137201163 CDS
T11154
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tty01001
]
137201163 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tty04054
]
137201163 (ciita)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
137201163 (ciita)
Protein kinases [BR:
tty01001
]
Serine/threonine kinases: Other
TAF1 family
137201163 (ciita)
Pattern recognition receptors [BR:
tty04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
137201163 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
AAA_16
LRR_8
nSTAND_NTPase5
nSTAND3
NPHP3_N
Rx_N
AAA_22
AAA
TsaE
Motif
Other DBs
NCBI-GeneID:
137201163
NCBI-ProteinID:
XP_067472174
LinkDB
All DBs
Position
17:20176556..20201037
Genome browser
AA seq
1588 aa
AA seq
DB search
MAHFEEVLDGVRLALTWASPAEIQAMLEGLVEEQIISEAYSKSLSLHRLIEGIEPETVLS
EPTCKARSDELEGAIHSQGSTTYWHQDQYSQVRKYGLSKSRESAITDYNQMRSEDEHNCT
RSMPNIHPHYGSVNYGHDPKLIQELSHWISSRGTAMDEHYLSHRIICDHQFNLRLEEGMT
ELLRDADSMQKLLSDNERVDEGNSEDEKEWLEQVEEAARRIAVPLWQHWDRGQRMLLPLV
PCMTIGCSASENGGTDSDTPCPVFDMEDETELAAACQMLDLYTNNCKCMEAGVTDTSLTL
DTERATDTLKGLYFSKSDSVVATRLNSDHFNISETTDTALDASPVEACAADDHENKEDEE
RVDSHWDTKMHEVEQDHEFGDLPDDLSEFLNNEYLPEFIDTEVLFGDPWLNCGDNNSDVL
TTTELPSSDSHQQEKQHNLRSKTNNRHKRPKAPRSQPCTDENMPSRAKRPRAAGQAKTKK
AQTEPTVTQGSDTGSEQSSAETAGLSTPSPRILHLHPSIQFITIPDTPGYQVVQTLSLSP
PVIRLPLPNTAATPTYIFVPAPSPPRNCQMPPLSPVDGAVAPVQMSSSPPGSLSDTASKA
MSPPRASPLFPSNETSPCKESPVPQSPTVLDIPQGVKDYIQEAKAHMSQTCQDMEPGMNL
TSHYIDVQVIQREILRSGKNPNKCLDKELVIMGETDQQKSLLGQSQIFESSNGDKPKRYI
LLLGNAGMGKTTLIRKLCLDWARDCIPQFDFVFLLDGKALTITEPTYSLQTLLLNLSSFA
PSCIDPQAVYAQILAAPKRVLIIFDGFDELRDYEILLQTQEKDLITSLQKDSKAQTYTVR
QLYSAILQRVLLPGCTLLLSTRPRGTASQLLRRADSLLEMSGFTPTYVESYLSQYFTDPA
LRTSAMDCLKNCSYLHHLCWNPGLCRLVCLVLEQSKSSEILPRTLTGLCHQVLRLKIERD
CRSTHSQAEAQAQISIQSGEETQTHTSNNTQAKRGSKNTQRKSRAQVRTRSRTQRARRAK
VQEKEAGEVEAEEMKSDGGDVDSTEERELLSQLSSLAWEGVKANSSIIPTGRTIATKLEA
FGLRTGLFLSHHLKTKQVFSGGEREGGEGEDREKKGRGQKGQRRENQGSTDMENNISDNI
LMWANPFLQSYLAGVHLALSRTVSDRTFLQSLPFQSGSKGRRRPQREELELTQRFAVGLL
FHNRTELQRLHLYTETTFRDMVVSKQGLVTKHLEGLSHVDLSPAQILEACHFVYEASFTH
EDDSKDSGGTRLATHLAANLPEVLTFHRVSLSPLDMFAVQNVLERGGTEGRSFCLDLEDS
GIQISGLRALVGLSNINTYRACIADVITLWGQLEQSGEEGLLQQVISKFKIHPLKATQVC
HIEHLAKLVNIHVHRRLSDSSSSQSHSILAEGVPAVKELHKLEFELGPESGPLALPKLWE
LLPGLHNLQHLDLENSKIGDKGAEKLADALVSLCSLEILNLSQNCIGDQGVKKLATTLRD
LPKLHCLSLYSNVISDEGAESLAAALPQMASLTDLDVKYNKLTDVGAQSLGVSLRNCKKI
KTLRMWNQCIPYGVFERLQQQDHRILWH
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcccactttgaggaggttctggacggagtgcggctggctctgacctgggcctctcct
gctgagatccaggctatgctggagggtttagtggaggagcagatcatctcagaggcctac
agcaagagcttgagtcttcacagacttattgaggggattgaacctgagacagttctcagt
gagccgacatgtaaagctagatctgacgagctggaaggcgcaattcattctcaaggatcc
accacctactggcaccaagatcaatacagtcaggtgaggaaatatgggttatcgaagtca
agagaatctgccatcactgactacaaccagatgagatcagaggatgaacataactgtaca
aggtccatgccaaatattcatccacactatggctctgtgaactacggacatgaccctaaa
ctaatacaggaattgagccactggatatcatcaagagggacagcaatggacgaacactac
ctcagtcacaggatcatatgtgaccaccaattcaatctcagattagaggaaggaatgaca
gaactgcttagagatgcagattcaatgcagaagctcttaagtgataatgaaagagtagat
gaggggaattcagaggatgagaaggagtggttggagcaagtagaggaagcagccaggcga
atagcagttcctctgtggcagcactgggaccgaggacagaggatgttactgccgctggtt
ccttgtatgactatcggctgttcagcaagtgaaaatggaggaaccgacagtgatacacca
tgtcctgtttttgatatggaagatgaaacagagcttgcagccgcttgccagatgctagac
ttgtacactaacaactgtaagtgtatggaggctggggttacagacacgagcttgacattg
gatacagagagagccactgacacattaaaaggcctctatttctctaaatctgacagtgtg
gtggcaaccagactaaattcggatcatttcaatatctctgaaacaactgacacagcatta
gatgcatcacctgttgaggcctgtgcagcagacgaccatgaaaataaagaggatgaggag
agggtggattcacactgggataccaagatgcatgaagtggaacaggaccatgaattcgga
gatctaccagatgatttatctgaattcttgaacaatgagtacctgccagagtttatcgac
acagaagtcctctttggcgatccatggttgaattgtggggacaacaacagtgacgttctc
acaacaacagagctacccagctcagacagccaccagcaggaaaagcagcacaatttaaga
agcaaaacaaataacaggcataaaagaccgaaagctcctcggtcacaaccatgcactgat
gagaatatgccatccagagctaaaaggccccgagcagcaggtcaagcaaagactaaaaaa
gcacagactgagccaactgtcactcagggcagtgacacaggatcagagcagagttcagca
gagacagcaggcctctccacaccttcaccgaggatccttcatctccatccctccatccag
tttatcactatcccagacactccaggatatcaggttgttcagacactgagtctctctcct
ccggttattagacttccactccccaatacagctgctacaccaacatacatatttgtgcct
gctccctcgccaccccgcaactgccaaatgccacccctctccccagtggacggtgcagta
gcaccagtccaaatgagttcatccccacctggatctttgtcagacactgctagcaaagcc
atgtctcctcctcgtgcctcaccactcttccccagtaatgaaacatccccttgtaaagaa
tcacctgttcctcagtctcccactgtccttgatattccacagggtgtcaaggactacatt
caggaagccaaagcccacatgagtcaaacctgccaggatatggaaccagggatgaacctg
acttctcattacatcgatgtgcaagtgatccagagagagattcttcgctctggaaaaaac
ccaaacaaatgcctggacaaagagctagtcatcatgggagaaacagaccaacaaaaaagc
ttgttggggcagagtcagatctttgagagctcaaatggagacaaacccaaacgctacata
ttgctactcggcaatgcaggcatggggaaaaccaccctgatcaggaagctgtgtcttgac
tgggccagagactgcatcccacagtttgactttgtcttcttattggatggcaaagcactc
accataacagagccgacgtatagccttcagaccctcctgctcaacctctcctcctttgcc
ccttcctgcatcgacccccaagcagtgtatgctcaaatccttgcagcccctaagcgtgtg
ctaatcatttttgatgggtttgacgagttgcgggactatgaaattcttctccagactcag
gaaaaagacttgatcacatcattgcaaaaagacagtaaagcgcagacctacacagtgaga
cagctatactctgccatccttcagagggtccttcttcccggctgcactcttctgctctct
acccgaccaagaggcactgccagccagctacttcggcgggcagacagccttttggaaatg
agtggcttcacccccacatatgtcgagagttatttgtcccagtactttactgatcctgcc
ctcaggacatctgccatggactgcttaaaaaactgcagctatctacatcatctctgctgg
aaccctgggctatgtcggctggtgtgcttggttttagagcagtccaaaagttcagagatc
ctaccgagaactttaaccggactctgccatcaagtgcttcgtctgaaaatagaaagagac
tgcaggagcacacattcacaggctgaggctcaagcacaaatatccattcaatctggagaa
gaaacccagacacatacctcaaataacactcaggcgaagagaggttccaaaaatactcag
agaaagtcccgagcacaggtgcgcactcgctctcgcacccaaagagcaaggcgggcaaaa
gtacaggagaaagaggcgggtgaagtggaagcagaggagatgaagagtgatggaggtgat
gtagatagcacagaggagagagagttgctgtcccagctgagctctttggcctgggaaggg
gtcaaagccaactcttccatcattcccacgggacggaccatagccaccaaactcgaggcg
tttggtctcaggacagggctcttcctctctcaccacctgaaaacgaagcaggtgttttca
ggtggtgagagggaaggaggggaaggagaggacagagagaaaaaaggaagaggacagaaa
ggacaaaggagggaaaaccaaggaagcacagatatggaaaacaatatcagcgataacatc
ctgatgtgggcaaacccctttcttcagagttacctggcaggggtccatctggctctgtca
aggactgtatcagaccgtactttcctccagtccctccctttccagtcgggctcaaagggg
cgtcggcgaccccaaagagaggagctggagctgactcaacgatttgcagttggcctcctt
ttccacaacaggacagagctgcagaggcttcacctgtacacagagacaactttcagagac
atggtagtcagcaagcagggtttagtaaccaaacaccttgagggtctttcccatgttgac
ctgagccccgcacagattctggaggcgtgtcactttgtttatgaggcaagtttcacgcat
gaggacgatagcaaagatagtgggggcacacgattggctactcacctggcagcgaacctt
ccagaggttctgacatttcacagagtttcactcagcccactggacatgttcgctgtgcag
aatgttctcgaaaggggcggaactgaaggtagaagtttctgtttggatctggaggactct
gggatacagatctctggactcagggccctggtggggctcagcaacatcaacacatacagg
gcatgcattgctgatgtcatcaccctatgggggcagctagagcagagtggtgaagagggg
ctcctacaacaggtgatctccaagttcaagatccaccctctgaaagccacgcaggtgtgt
cacatagagcacctggccaagctggttaacatacacgtgcacaggaggctgtcagacagt
agctccagccaatcacattccatcctggcagagggagtgccagcagtcaaagagctacac
aagctggagtttgagcttggtccagagagtggccccctggctcttcccaagctgtgggag
ctcctgccaggtttacataacctacagcacttagatttagagaacagtaaaatcggagac
aaaggagctgagaaattggctgatgctttagtctccctctgttccctggagatactcaat
ctgtcacagaattgtataggagaccagggggtaaagaaactagcaaccacactgagggat
ctgcccaaactgcactgtttaagtctctacagtaacgtgatttctgatgaaggggcagag
agtttggctgctgccctcccccaaatggcttctctcactgacctagatgtgaagtataac
aaattaacagatgttggagcacagagcttgggagtcagtctgagaaactgtaaaaaaatc
aagactttgaggatgtggaaccagtgtattccatatggagtatttgagagacttcaacaa
caggaccacaggatcctttggcattag
DBGET
integrated database retrieval system
