Thunnus thynnus (Atlantic bluefin tuna): 137201344
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Entry
137201344 CDS
T11154
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137201344 (sox10)
Transcription factors [BR:
tty03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137201344 (sox10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137201344
NCBI-ProteinID:
XP_067472451
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All DBs
Position
17:22218052..22227319
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AA seq
494 aa
AA seq
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MSREEQSLSEVELSPGVSDDSRSLSPGHSSGAPGGGDSPLHGQQQLAGLDDAAAGSSIKS
DDEDERFPAGIREAVSQVLNCYDWTLVPMPVRVNSGNKNKPHVKRPMNAFMVWAQAARRK
LADQHPHLHNAELSKTLGKLWRLLSEGDKRPFIEEAERLRKQHKKDYPDYKYQPRRRKNG
KHGSGSGSEADGHSEGEVSQSQSLYKGLHLDVAHSGGGRSPLADGHHPHAAGQSHSPPTP
PTTPKTEPQSGKAGDGKREGPGNGGSRGTMGAEGSSGAPGSGKPHIDFGNVDIGEMSHEV
MANMEPFDVNEFDQYLPPNGHPGVGQSVGAGVAVTASPASPYTYGISSALAAASGHSAAW
LSKQQQPQQHHSSPLGSDPSKAPIKSEAGGAGSHFAEAASAGSHVTYAPLSLPHYSSAFP
SLATRAQFAEYADHQASGSYYAHSSQASGLYSAFSYMGPSQRPLYTAITDPASVPQSHSP
THWEQPVYTTLSRP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagaggagcagagcttatcggaggttgagctcagtcccggggtgtcggacgac
agccgctccctatcaccgggtcactcctccggtgcgcctggcgggggggactcgcctctc
cacgggcagcaacagctggcgggtctggacgatgcggcggccggctcctccatcaaatcc
gatgatgaggacgagcgcttccccgcagggatccgtgaggcggtgagccaggtgctcaac
tgctacgactggacgctcgtgcccatgcccgtgcgcgtgaacagcggaaacaagaacaag
ccgcatgtgaagaggcccatgaacgccttcatggtgtgggcgcaggcggcgcggaggaaa
ctggccgaccaacacccgcacctgcacaacgcggagctcagcaagaccctggggaagctg
tggaggcttcttagtgagggcgacaagcgacccttcattgaggaggcagaaaggttgagg
aagcagcataagaaggactatcctgactacaaataccagccacgacgccgcaagaacgga
aagcatggttccgggtcaggaagtgaggctgacggccattcggagggtgaggtcagccaa
agccaatccctctacaaaggcctccacctagatgtggcccacagtggggggggcaggtcc
cctctggcagatgggcaccaccctcatgctgcaggtcagagccacagtcctcccacacct
ccaaccactcccaagaccgagcctcagtccgggaaggcaggcgatggaaagagggagggg
cctgggaacgggggctcccgtggtacaatgggagcagagggaagttcaggtgctccagga
tctgggaagcctcacatcgactttggtaatgtggacattggtgagatgagccacgaagtg
atggccaacatggagccttttgatgtcaacgagtttgaccagtaccttcctcccaacggg
cacccgggggtcgggcagagtgttggggcaggagtagctgtaacagcttctccagcctct
ccatacacctacggcatctcctcagctctggcagcggccagtggacactcagcagcctgg
ctctccaagcagcagcagccgcagcaacatcacagctcccctctgggctcggacccctcc
aaggccccaatcaagagcgaggccggaggtgcaggtagtcactttgcagaggcagcctca
gcaggttcccatgtcacctacgcccccctcagccttcctcactacagttctgcctttccc
tcactggctaccagggctcagtttgctgaatacgctgaccaccaggcttcagggtcatac
tacgctcattcgagccaggcctcagggttgtactctgccttttcttatatggggccctcc
cagaggcccctgtacactgccatcactgacccagccagtgtaccgcagtctcacagcccc
acacactgggaacagcccgtctacacaacactgtcgcggccatga
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