Thunnus thynnus (Atlantic bluefin tuna): 137201418
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Entry
137201418 CDS
T11154
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137201418 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137201418 (xab2)
03041 Spliceosome [BR:
tty03041
]
137201418 (xab2)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137201418 (xab2)
Spliceosome [BR:
tty03041
]
Complex B
Other components
Prp19-related factors
137201418 (xab2)
Complex C
137201418 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137201418
NCBI-ProteinID:
XP_067472571
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Position
17:complement(11373471..11381632)
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AA seq
848 aa
AA seq
DB search
MPTLNGKTDVIFENDDLPYEEEIIRNPYSVKCWMRYIEFKQNGSRSTLNMIYERALKELP
GSYKLWYNYLRERRKQAKGKCITEPVYEEVNNCHERALVFMHKMPRIWLDYCQFLVSQCK
ITRSRRTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYID
YLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR
GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES
MIAAKMETTAEIGQDEDDDIDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK
LYEGIPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN
YKQVDDLATVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK
VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI
ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE
YGLARHAMAVYERATEAVETQERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR
DMCLRFADMESKLGEIDRGRAIYSYCSQICDPRVTAEFWQTWKEFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMSSQMLKATTSSTGTVSDLAPGQLGIDDMKMLEQKAQQLAAEAEH
DKPKPKEKILFVRSDTSRSELAELSKQANPDEIDIDDEDEDDEDQGPDEVQLEQKSVPTA
VYGGLKDD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgctcaacggaaaaacggatgttatatttgagaacgatgatctgccttatgag
gaagagattatcaggaacccatactcagtcaagtgctggatgcgttacatcgaattcaaa
cagaatggatccagatctaccctcaatatgatatatgagcgagctctgaaagagctgcct
ggaagctataagctatggtacaattacctgagagagagaaggaaacaagccaaagggaaa
tgtatcactgaaccagtctatgaagaggtcaataattgccatgaaagggcactggtgttc
atgcacaagatgcccagaatatggcttgattactgccagttcctggtatcccaatgcaag
atcacaagaagtcggcgaacatttgaccgggcactcagagctctacctgtcactcagcat
ccacgtatctggcctttgtatcttcgctttgtccgtaacctgcccctgcccgagacagcc
atccgggtgtaccgcaggtaccttaagctttctccagagaatgcagaggaatacatcgac
tacttacggtctgttggccgcttggatgaagcagctgtgcggcttgcagcagttgtcaat
gatgaaagctttgtgtcaaaagagggcaagtctaactaccaactgtggcatgagctatgc
gacctgatctcgcagaaccctgataaggtgacctctctgaatgtaggagccatcatccgg
ggaggcctcacacgctttactgaccagcttggcaaactttggtgctccttggctgactat
tacatcaggagtggccactttgaaaaggcccgtgatgtatatgaggaggccatccttact
gtggtaacagtaagggatttcacacaagtgtttgatagttatgcccagtttgaagagagc
atgattgctgccaagatggagaccactgctgagatagggcaggatgaagatgatgacatc
gacctggagcttagactggctcgctttgagcagctgatagcacggcggcctctcctgttg
aacagtgtactgctgcggcagaaccctcataatgtccatgagtggcacaagagggtaaaa
ctgtatgagggcattccacggcagatcatcaacacatacacagaagcagtacagactgtg
gatccaatgaaggccacgggaaagcctcactctctctgggtttcttttgctaaattctat
gaagaaaatgagcagctggatgacgccaggactatctttgagaaggctaccaaggtgaac
tacaagcaagtggatgaccttgccacagtgtggtgtgaatatggagagatggagctgcgc
cacgaaaactatgaacaggccctgcgcatactcaggaaagctacagccatcccatccaag
aaagcggagtactttgatgcatctgagccagttcaaaacagagtctacaagtccttgaag
gtctggtctatgctggcagacttggaggagagtcttggtactttccagtcaacaaaagca
gtgtatgaccgcattattgacctccgcattgccacaccacagatcatcatcaattatgcc
atgttccttgaagagcacaactacttcgaggaaagcttcaaagcatatgagcgtggcatc
gctctcttcaggtggccaaatgtttacgacatatggaacacttacctcaccaagttcatt
gatcgttatgggggtaagaagctggagagagccagagatttgtttgaacaagccctggat
ggctgtcctgccaagtttgccaagaccatttacctgttgtatgccaaattggaggaggag
tatggattggcacgacatgccatggctgtatatgaaagagcaacggaggcagtagaaact
caggagagacatcacatgttcaatatctacatcaagagagcagctgaaatatatggagtc
acatataccagagcgatttaccagaaggctattgaggtccttcctgatgagcatgcgagg
gacatgtgcctgcgatttgctgacatggagagtaaattgggtgagattgatcggggcaga
gcaatctactcctactgctcccagatctgtgaccccagggtgacagctgagttctggcag
acctggaaagaatttgagatccgccacggaaatgaggacactattagagaaatgctgagg
atcaaacgcagtgtccaggctacatacaacacccaggtcaatttcatgtcctctcagatg
ctgaaggccacaacaagctccacaggcactgtgtcagatcttgctccaggccagttgggg
attgatgacatgaagatgctggagcagaaagcacagcagcttgctgcagaggcagagcat
gataaacccaagccaaaagaaaagattctctttgtcaggagtgacacttctcgcagtgag
ttggctgaactttccaaacaagccaatcctgatgagattgacattgatgatgaggatgaa
gatgatgaagaccaaggaccagatgaggtgcagcttgaacagaagagcgtccccacagct
gtctatggagggcttaaagatgactga
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