Thunnus thynnus (Atlantic bluefin tuna): 137201455
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Entry
137201455 CDS
T11154
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137201455 (ppfia3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137201455 (ppfia3)
Membrane trafficking [BR:
tty04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137201455 (ppfia3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
DUF745
Tc-38
Motif
Other DBs
NCBI-GeneID:
137201455
NCBI-ProteinID:
XP_067472627
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Position
17:complement(5626261..5656404)
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AA seq
1242 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGGSSSPAGGGGGMGGGMGGIGGYGSRDPRGGGGGGGGGGGGG
GGGGGGSDEGGSTGNLESLMVNMLTERERLLESLRETQESLGTAHLRLRELGHEKESLQR
QLSIALPQEFAVLTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLR
MTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVGVLEEELQSSS
QEVVSLREQIKRRQQGLDNGKERLPNGPSSILDDGEIDRQREGEIERQRSELGQLKERLA
LMCRQVGEIEEQLTSARRELARSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQR
EATSLHDIKDKLENELASKESLYRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQ
LAQRVAALNKAEERHGNFEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKL
LSESNERLQLHLKERMAALEEKNALSEELSNMKKLQDDLLANKDQLIAELERIQLELDQL
RARPGGSYSSRSLPGSALELRYSHGGGSLPTGSTTHLDPFGNASAGGVVRRSHRARWSSA
REDSTKYPDWESGALLGTGYEPGVDVGCSDDEDDGEHRFGSELLSPSGQTDVQTLAIMLQ
EQLEAINKEIKLIQEEKENTELRAEEIESQVSIPPSSLGRDSTGRGFIPSSITSSTLASP
SPPSSGHSTPRLPHSPAHETDRQNNKDDDRSLALLDSTPPPTPRALRLDRMTLTHPGAML
DDPREFRSLSADGSSSNSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGRDGSASLA
STPSEDLASGDPMGMNKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLE
LWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPS
APASTRSSTSNVWMTHAEMESLNAATKPPELKEFSWDQILAYGDMNHEWVGNDWLPSLGL
PQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERR
REESVHQNKDVMVWSNERVMCWVQTIGLKEYADNLRESGVHGALLALDDTFDYTDLALLL
QIPNQNTQARQLLEQEYNSLISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSA
ETLPANFRASAISTPSVTLRKVQSDANSGARGESASVRTYSC
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccaaccatctcggaggacgggcgaggcgggggaggaggcggc
tcgtcttccccagcggggggcggaggaggaatgggcggagggatgggaggcatagggggc
tacgggagcagggatcctcgtggtggtggtggtggtggtggtggaggcggaggaggaggc
ggcggaggaggaggcggcagtgatgaaggaggcagtacgggcaacctggagtcgctgatg
gtgaacatgctgacggagagggagaggctgctggagagcctgagggagacacaggaaagt
ctggggacggcccacctacgtctgcgggagctgggccacgagaaggaatccctccagagg
cagctgtccatcgccctgccgcaggagtttgcagtgctgaccaaagagctgaacctctgc
cgggaacagctgctggagagagaggaggagatcgccgagctgaaggcagagcgaaacaac
acacgactgctgctagaacatctggagtgcctggtgtcccgtcacgagcgcagcctgagg
atgactgtggtgaagaggcaggcccagtccccggccggggtctccagcgaggtggaggtc
ctgaaagccctcaagtcgctgttcgagcaccacaaagcgctggatgagaaggttcgagaa
aggctacgggtggctttggagcgcgttggggtcctggaggaagagctgcagtcttcctct
caagaagtggtgtctttaagggagcaaatcaaacggcggcagcaaggactagacaacggc
aaagagcggctgcccaacggaccttcctccatcttggatgacggagagatcgacaggcag
agggagggcgagatagagcgacagaggtcagagttgggccagctgaaagagagactggcc
ctcatgtgcagacaggtcggggagatcgaggagcagctgacgtccgccaggagggagctg
gccagatcggaggaggccaaccagaaactacagagagatgtgaaagaggcactctgtcaa
agggaagacatggaagagagaatcaccacattagaacgcaggtacctcagtgcccagagg
gaggcgacgtctctccatgacataaaagataaactggagaacgagctggccagcaaagag
tctctctacagacagagcgaggagaagaaccggcagcttcaggagcgtctggatgatgcc
aaacagaagttgcagcaaaccctgcagagggctgagacgctgcctgagatcgaagcccag
ctcgcccagagagtggcagcactcaacaaggcggaggagcgtcacggcaacttcgaggag
cgtctgcggcagatggaggcgcaactggaggagaagaaccaggagctacagagagcgagg
cagagggagaggatgaacgatgaacacaacaagcgtctctccgacacggtggacaagctg
ctgtctgagtccaacgagaggctgcagctccacctgaaggagagaatggccgccctggag
gagaagaatgccctatctgaggaactttccaacatgaagaaactccaggatgatctcttg
gcaaacaaggaccagctcatagcggagctggagaggattcagctggagttggatcagttg
agagcgaggcccgggggctcttactccagtcgctctctcccaggtagcgctctggagttg
aggtattcccacggaggtgggtccctcccgacaggctccaccacacatctggatccgttt
ggtaacgcctccgccgggggcgtggtcaggcgaagtcaccgggcccgttggagctccgcc
cgggaggattctacgaagtatccagactgggagagcggggctctgctggggaccgggtac
gagcctggcgtcgatgtgggttgctccgacgacgaggacgacggggagcatcggttcggc
tccgagctgctgtccccgagcggacaaacggatgtgcagactctggccatcatgctgcag
gaacagctggaggccatcaataaggagatcaaactgatccaggaggagaaggagaacaca
gagttgcgggccgaggagatcgagagccaggtcagcatccctccgtcctccctggggaga
gacagcacaggacggggcttcatcccctcctccatcacatcctccaccctggcctccccc
tctccccccagctctggacactccacccctcgtctgccccactccccggcccatgagacc
gatagacagaacaacaaagacgacgatcggtctctcgctcttcttgactctacgcctcct
ccaactcctcgtgctctgcgattggacaggatgaccctcacccatccgggcgccatgctg
gacgacccccgggagttccgcagcctctcagcagatggcagcagttccaacagcagccaa
gattctcttcacaagtccagcaagaagaaaagcatcaagtcttccatcggtcggcttttt
ggaaagaaggagaaagggaggatgggccaacctgggcgagatggatctgcgtctcttgca
tctacaccttctgaagacctggcctctggagaccctatggggatgaacaagactgggact
ttgggtccagcagataaagaccgccgcagcaagaagaagcatgagctactggaagaagca
tgtcgccaaggacttcccttcgcatcttgggatggacccactgttgtatcttggttggag
ctgtgggtgggaatgccagcctggtacgttgcagcctgtcgtgcaaacgtgaagagcggc
gcaatcatggccaacctgtcggacacagagatccagagggagatcggcatcagcaacccg
ctgcaccgcctcaaactgcggctggccatccaggagatggtgtccctcaccagcccctct
gccccggccagcactcgctcttcaaccagtaacgtgtggatgacccacgcggagatggag
tctttaaacgctgccaccaagcctccggagctgaaagagttcagctgggatcagatactg
gcctatggtgatatgaatcatgagtgggtgggcaacgactggctgcccagcctgggcctg
ccacagtatcgcagctatttcatggagtccctggtggatgcccgtatgttggaccacctg
accaagaaggagctgagaggacagctcaaaatggtggacagcttccacagggttagtttg
cattatggcatcatgtgcctgaagcgcctgaattacgaccgcaaggagctggaaaggagg
agagaggagagtgtccaccagaacaaagatgtgatggtgtggtccaatgagcgtgtgatg
tgctgggtgcagactatcggtctgaaggaatatgccgacaacctccgtgagagcggcgtc
cacggggctttgctggctttagacgacacctttgactacactgacctggccctgctgctg
cagatccccaatcagaacacacaggccagacagctcctggagcaagagtacaactccctc
atctccatgggaaccgagagacgacctgatgaggatggaactaagacattcacccgctcg
ccctcctggaggaagatgtttagggagaaagacctacggggcgtgacctctgactccgcc
gagaccctgcctgctaacttccgtgcctcagccatctccacgccctcggttaccctgaga
aaagttcagagtgacgccaactctggtgcccggggtgaatctgcctcagtgaggacgtac
tcctgttga
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