Tenuifilum thalassicum: FHG85_07910
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Entry
FHG85_07910 CDS
T06728
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG85_07910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttz03019
]
FHG85_07910
03009 Ribosome biogenesis [BR:
ttz03009
]
FHG85_07910
Enzymes [BR:
ttz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FHG85_07910
Messenger RNA biogenesis [BR:
ttz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHG85_07910
Ribosome biogenesis [BR:
ttz03009
]
Prokaryotic type
rRNA helicases
FHG85_07910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QKG80187
UniProt:
A0A7D3XER1
LinkDB
All DBs
Position
complement(1867269..1868849)
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AA seq
526 aa
AA seq
DB search
MEINNEFKQLGLSDKALHAITKKGFEQPSPIQKITIPVLLSEDNDIIAQAQTGTGKTAAF
GLPLIEKLEGQPKGIKTLVLVPTRELALQVCDEMLSLAEKRVVITAVYGGQSISEQQRRI
KKGVDIVVGTPGRILDLIRRGDLDFSSLQYFVLDEADEMLNMGFIDDIELIMKHTPDEKR
VWLFSATMPDRIVKLAKKYMKSPKKLQVDRTQPTTGLTDQIYFEVHEGDKFDALTRIIDI
EPEFYGLVFCRTRNDVDTVTNKLIERGYAAEGLHGEISQAQREKTLKKFRKKYINILIAT
DVAARGIDIADLTHVINYSLPQDPESYIHRIGRTGRAGKQGTAITFVSPTEYRKLNYFQK
ATKVNIRKELLPAAEDIVAVKREKIKEELREIIQSGKYSDYLGMAEDLIETNSPEVALAA
LLRLAFKTQLDASSYSEIRTFHVDTKGTTRLFIGLGKKDGMNPRKISEFIRKEVQIPDRK
IDDILVRDDFSFITVPFKEAERILNAFANRKADGKPLITKAKPKKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaacaatgaattcaagcagttagggttatcggataaagcccttcacgcaatc
acaaaaaagggctttgaacaaccttcacctattcagaagataaccatacctgtcttgtta
agtgaagataatgatattattgctcaagcccaaacaggaacaggaaagacagcggctttt
gggttgccattaatagaaaaactcgaaggccaacccaaaggaattaaaacgcttgttcta
gttcctacccgtgagcttgccctgcaagtttgcgatgagatgctctctcttgcagaaaaa
agggtggttattactgccgtttatggtggacagtctatatcggaacaacaacgtcgtata
aaaaaaggtgttgatattgtagttggtactccaggtagaatacttgatttaattagacgt
ggcgatttagattttagctctttgcagtactttgttttagacgaggccgacgagatgctt
aacatgggcttcattgatgatatagaactcattatgaagcatacacccgatgaaaagcgt
gtttggcttttctcggcaactatgcccgatcgtatcgtaaagttggccaagaagtacatg
aagagccctaagaaattacaggttgatagaacccagccaactacaggtttaaccgatcag
atctattttgaagtacatgaaggtgataaattcgatgctttaactcgaataattgacatt
gaaccagagttttacggattggttttttgtcgtacccgaaacgatgttgatacagttacc
aataaacttattgagcgtggttacgctgcagaaggtttgcatggcgaaatttctcaggca
caacgcgaaaagactttaaaaaagtttcgcaaaaagtacatcaatatccttattgctacc
gatgttgccgcacgagggatagacattgcagaccttacacacgttattaactatagttta
ccccaagacccagaatcatacatacatagaattggaagaaccggtagagcagggaaacag
ggtactgcaattacttttgtatcacctaccgagtaccgtaaactcaactatttccagaaa
gccacaaaggtaaacattcgaaaagagcttttaccagctgccgaagatatagttgcagtt
aaacgagaaaagattaaagaggagctccgcgaaataattcagagcggtaaatattcagat
tatttagggatggctgaggatttgattgaaaccaatagccccgaagttgctttagctgca
cttctccgcctcgcctttaaaacacagctcgatgcatcttcatattccgaaattaggact
tttcatgttgataccaagggaacaactcgtttgtttattgggttagggaaaaaggatggg
atgaatccaaggaagatttctgaatttattagaaaagaagttcaaatccccgatagaaaa
attgacgatattttagttcgcgacgatttttcttttataacggttcctttcaaagaggca
gaaaggattttaaatgcatttgctaatcgtaaagccgatggcaaacctttaataactaag
gcaaaacccaagaaaaagtaa
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