Tenuifilum thalassicum: FHG85_09450
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Entry
FHG85_09450 CDS
T06728
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03420
Nucleotide excision repair
ttz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FHG85_09450
03430 Mismatch repair
FHG85_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttz03400
]
FHG85_09450
Enzymes [BR:
ttz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHG85_09450
DNA repair and recombination proteins [BR:
ttz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FHG85_09450
MMR (mismatch excision repair)
Other MMR factors
FHG85_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKG80480
UniProt:
A0A7D4BC33
LinkDB
All DBs
Position
2256295..2258382
Genome browser
AA seq
695 aa
AA seq
DB search
MEIKEEHIRETERLLINGNLFDTDERVPFIKNLDSCDLLAVPGSGKTTVLLAKLYCLAKH
LPFKDGSGILVLSHTNTAVNEIEKSLKKVVPILFEYPNFVGTVQSFVNKFLANPACFLKY
GSYIHQNDNDIYEKEAEKFYYSLPWKNTEPKGLRNKLFGKVNHGKGTISPDEKQQNVIEF
LKYFELDIIERKIKYNNKPFYTFNGTAQPYYLELEQWKEDLFSKGILNYRDSFYLGDWFI
ENNPRITSLLKKRFKYVFIDEMQDLEKYQIDIIDKIFYTPESQSTIQRIGDINQSIYNSG
KKVKVETDWQPREPVMYLRDSYRLTKENADIVNFFTLDRQQDENGNQRFVVNGKRELVNA
IKPHLILFDKTTKGKLKEKFKELIKENQLDQTVEGKKYGFKIIGWSAKWEDEENHDGKFR
LEDIFEEYKKDNSSIKETYTSLSEYLQYFDKNKRTLKAARKAILNALIHILRIENKKHAV
TVRRKDKERYYTKKDLIKYIQEEKNGSNYEEFKSKLYKWSFDLAVKQKHEEVYHCIKDFI
NSDFKEWFGFEITNETQNFIGRNFEKLIQVEDKQENKQKEGINIEIGTVHSVKGQTHCAT
MYVETAYQRPTYETQKIIKNTSNPLLFHEHNCNGTYDKQALKMMYVGFSRPTHLLCFAVL
KENVKDKIENYKNAGWEIFDLTENGNDKNNINKLH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagaggaacatattagagaaactgaaagattacttataaatgggaacctg
tttgatactgatgaacgagttccatttattaaaaatcttgattcttgcgatttattggca
gttccaggaagtgggaaaaccacagttctacttgctaaactttattgtttggcaaaacac
ttaccgtttaaagatggttctggaattttagttttatcacataccaatacagctgttaat
gaaattgaaaaaagcttaaaaaaagttgttccgattctttttgaatatcccaattttgtc
ggtactgttcagagttttgtaaataagttcttagcaaatcctgcttgctttttaaaatac
ggttcgtatatacatcagaatgataatgatatttatgagaaagaagcagaaaagttttat
tattctttaccctggaagaatacagaaccgaagggattgcgaaataaattatttggcaaa
gttaaccatgggaaaggtactatttctcctgatgaaaaacagcaaaatgttattgaattc
ctaaaatattttgaattagatattattgaaagaaaaattaagtacaataataaacctttc
tatacttttaatgggactgctcaaccatattatttagaattggagcaatggaaagaggat
ttattttccaaaggcattttgaattatcgggattcattttatttaggcgattggtttata
gaaaacaatccacggataactagcttattaaaaaagcgtttcaaatatgtatttatagat
gaaatgcaagatttagaaaaataccagatagatattatcgacaaaatattttatactcct
gaatcacagtcaacaattcaaagaattggcgatataaatcaatcaatatataattccggc
aaaaaagtaaaagttgaaacagactggcaaccacgagaaccagttatgtatttaagagat
tcataccgcttaacaaaggaaaacgcagatattgtaaatttttttacgctagaccgtcag
caagatgaaaatggaaatcaaaggtttgtggttaatggaaagagggaattagttaatgcg
ataaaaccacatttaattctatttgataaaaccacaaaaggtaaattaaaagaaaaattc
aaagagttaattaaagagaatcaattagatcaaactgttgaagggaaaaaatatggcttt
aaaattattggctggagtgcaaaatgggaggacgaagaaaatcacgatggcaaatttaga
ttagaagatatttttgaagaatataaaaaagacaactcttccataaaagaaacatacact
tcattaagtgaatatttacagtattttgacaaaaataaaagaacattaaaagcggcaaga
aaagctattttaaatgcattaattcatatactcagaattgaaaataaaaaacacgccgtc
actgttagaaggaaagataaagaaagatactacactaaaaaggatttgataaaatacatt
caagaagagaaaaatggcagcaattatgaagaatttaaaagtaaactctataaatggtct
tttgatttagctgtaaaacaaaagcatgaggaagtttatcactgtataaaggattttatt
aatagtgattttaaagaatggtttggttttgaaattactaacgaaacgcaaaattttata
gggagaaattttgagaaattaatacaagtagaggataaacaggaaaataaacaaaaagaa
ggcattaatattgaaatcggtactgttcattctgttaagggccagacacattgtgctaca
atgtatgtggaaactgcctatcaaagacctacttatgaaactcaaaaaatcattaagaat
acatcaaatcctttattatttcatgaacataattgtaatggaacatatgataagcaagct
ttaaaaatgatgtatgtcggattttctcgacctacgcatctattgtgttttgctgtttta
aaagaaaatgtaaaagacaaaatagaaaactataagaatgcaggttgggaaatatttgat
ttaactgaaaacggcaatgataagaataacataaacaaattgcactaa
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