Tenuifilum thalassicum: FHG85_12585
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Entry
FHG85_12585 CDS
T06728
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ttz
Tenuifilum thalassicum
Pathway
ttz03030
DNA replication
ttz03410
Base excision repair
ttz03420
Nucleotide excision repair
ttz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FHG85_12585 (polA)
03410 Base excision repair
FHG85_12585 (polA)
03420 Nucleotide excision repair
FHG85_12585 (polA)
03440 Homologous recombination
FHG85_12585 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttz03032
]
FHG85_12585 (polA)
03400 DNA repair and recombination proteins [BR:
ttz03400
]
FHG85_12585 (polA)
Enzymes [BR:
ttz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FHG85_12585 (polA)
DNA replication proteins [BR:
ttz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FHG85_12585 (polA)
DNA repair and recombination proteins [BR:
ttz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FHG85_12585 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FHG85_12585 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Peptidase_M3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QKG81066
UniProt:
A0A7D4CI43
LinkDB
All DBs
Position
3047546..3050317
Genome browser
AA seq
923 aa
AA seq
DB search
MKKRLLLLDAYALIYRAYYAFINRPMRNSKGLNTSAIYGFIRATLDAIKKFEPTHVAVAF
DVSGKTFRNDIYPEYKAQREETPEDIKTSVPIIKNLLEAFNIPIIEKEGFEADDIIGTIA
TKANPDEFEVIMMTPDKDYGQLLRDNVIMAKPARSGNDMEIVTAKEFCEKYDIQKPEQFI
DILALWGDVSDNIKGVNKVGEKTAAKLISQYGSIDNLLQNIDKLSPSQKKNFEEARDLIP
LNKKLVSIVTDIDLKLDIDNDLKVSPPKTEELIPLLEELEFRTLLKEFGASKRKEQGQYV
QGSLFDMPANKPERPTFNLKTIDDFDVDYRIAKSRDDRAKLIDELKQCQEFAFDTETTGL
DPISAELVGLSFAIKTNKAWWVSVPKNQDEAKSIVQEFAEVFANHNIGKIGQNIKFDMQV
LLNYDIEIKGKLFDTMLAHYLLEPDARHNLDYLSEIYLNYKPISIEELIGKKGKSQGNMR
NVDPELITRYACEDADLAYQLKQVLFEKLQGQGLTELYFKLEEPLIEVLTHMERNGVTLD
SQSLKEYGEMLSKQLVELEKEIRNMAGVPDLNISSPKQLGEVLFDKLKIATDAKLTKTKQ
YSTNEEELQKYIDKHPIVSKILEFRGIKKLLSTYIETLPLLVNKKTGKIHTSFNQAVAST
GRLSSNNPNLQNIPIRDENGREIRKAFIPSSEEHLLLSADYSQIELRLMAHMSNDQIMLE
AFEKGEDIHAATAAKIFKVPLNEVTREQRSKAKTANFGMIYGISAFGLSQRLGISRTEAK
ELIDGYFDTYKGVKAYMDQCVAEARERGFVETIFGRKRFLPDINSNNQVVRGLAERNAIN
APIQGSAADIIKMAMINVHREIISRKLKSKMIIQVHDELVFDVYKPELDEVKEVVKRCME
GAASLKVPLEVDMGIGNNWLEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcctgctactcctcgatgcctacgcccttatatacagagcttactatgct
tttattaatcggcccatgcgaaatagcaaggggctaaatacttcggccatttatggtttt
attcgggctacgctcgatgccataaagaaatttgaaccaacccatgtggcagtagcgttt
gatgtatcaggaaaaacattccgaaacgacatttatcccgaatataaagcacagcgagag
gaaacacccgaagatattaaaacttcggttccgataattaaaaacctacttgaagcattt
aacattccaattattgagaaagaaggttttgaagccgatgatattattggcacgattgca
acaaaggcaaatcccgatgagtttgaggtgataatgatgacacccgacaaggattacggc
cagctccttcgtgataacgtaataatggctaaacctgctcgcagcggtaacgatatggaa
atagttaccgcaaaagagttttgtgaaaagtatgacatacaaaaacccgaacaatttatt
gatatccttgcattgtggggagatgtttctgataatatcaaaggtgtaaacaaggttggg
gagaaaactgcggccaagctaatctcgcaatatggcagtatcgacaacttactccagaat
atagataagttaagcccctcgcagaaaaagaattttgaagaggcccgcgacctaatccca
cttaacaagaaactggtgagtatagttaccgatatcgacttaaaattagatattgataac
gacttaaaggttagtccacccaaaaccgaagagctaattcctctgctggaagaacttgaa
tttagaacgctactaaaagagtttggagcatcaaagagaaaagagcaaggccaatacgtt
cagggctcactctttgacatgccagcaaataaacccgaaagaccaaccttcaaccttaaa
accattgatgactttgatgtagactatcgcatagcaaagagcagagatgaccgcgcaaag
ctcatcgatgagcttaaacaatgccaagagtttgcatttgacaccgaaacaactgggctc
gacccaatctcggctgaacttgtaggcctatcgtttgctattaagaccaataaagcatgg
tgggtatcagtacccaaaaatcaggacgaggcaaaaagcatcgttcaggagtttgcagag
gtttttgccaaccacaacattggtaaaattggacaaaacattaagttcgacatgcaggtt
ctactcaattatgacatcgaaataaaagggaagctttttgataccatgcttgcccactac
ctgctggaacccgatgcaaggcataatctcgattacctttcggaaatctacttaaactat
aaacccattagcattgaggagctaattggcaaaaaggggaaatcgcaaggcaatatgcgt
aacgttgaccctgaactaataacccgttatgcctgcgaggacgccgatttagcctatcag
cttaaacaggtactttttgaaaaattacagggacaaggcctaacggaactttactttaaa
cttgaagaaccgctaattgaggttctaacccacatggaacgaaatggcgttactctcgat
tcccaaagccttaaggagtatggtgaaatgctctcaaagcagctggtagagctagagaaa
gaaattagaaatatggctggcgtccccgatttgaatatctcatcgccaaaacagctcggt
gaggtgctttttgataagctaaaaattgctactgatgccaagctaaccaaaacaaaacag
tattcaacaaacgaggaagaacttcaaaaatatatcgacaagcaccctattgtttcaaaa
attttagaatttagggggattaaaaaacttctatcaacatatatagagaccctaccctta
cttgtaaacaagaaaactggaaaaattcacacctcgtttaaccaggcagttgcctccacc
ggtcgattaagttcaaataatccgaatcttcaaaacattccgatacgcgatgaaaatggc
cgtgaaataagaaaagcatttattccatcgtcagaagaacacctactactatcggccgat
tactctcaaattgagcttcggcttatggcccacatgagcaacgaccaaataatgcttgag
gcttttgaaaagggagaggatattcatgctgcaactgcggcaaaaattttcaaagttcca
ttaaatgaggttacccgcgaacaacgcagcaaggccaaaacggcaaactttggcatgata
tacggcatctcagcctttggcctatcgcaacggttaggcatctcaagaaccgaagccaag
gagctaattgatggctactttgatacctataagggagttaaggcctacatggaccagtgt
gttgcagaggccagggaacgcggatttgttgaaacgatttttgggcggaagcgtttcctt
cccgatataaactcgaacaatcaggttgtgcgaggtcttgctgaacgaaacgctataaac
gcaccaattcagggctcggctgccgatatcattaagatggccatgattaatgttcaccgt
gagattatcagtagaaaattaaaatcaaaaatgataatccaggttcacgacgaactcgta
ttcgacgtttataaacctgaacttgatgaggtaaaagaagtagtaaaaaggtgcatggaa
ggagccgcaagtttaaaagtgccgttagaggtagatatgggaataggcaacaactggctt
gaagctcactaa
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