KEGG   Triticum urartu (red wild einkorn wheat): 125506649
Entry
125506649         CDS       T08232                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125506649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tua03041]
    125506649
   03036 Chromosome and associated proteins [BR:tua03036]
    125506649
Spliceosome [BR:tua03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125506649
 Complex B
    125506649
 Complex C
   U2 SnRNP specific factors
    125506649
Chromosome and associated proteins [BR:tua03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    125506649
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_2 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Adaptin_N Vac14_Fab1_bd mTOR_dom HEAT_Maestro UME IFRD MMS19_C
Other DBs
NCBI-GeneID: 125506649
NCBI-ProteinID: XP_048527377
LinkDB
Position
5:complement(18458996..18464582)
AA seq 895 aa
MAASGDEGRSSLGRECSSKQGRPKPRPGVLVRAACGLREAEPGRGALRPVAAREGVGAGR
VDGGVVGSGWGWEAGAGSGGRRRSEEGRRGSGRGTGRGTGGGRRRGAVRVERRRSVGAAG
STAASGARWGMSGGVDELVRPFVHKILVVIEPLLIDEDYYARAEGREIISNLSKAAGLAT
MIAAMRPDIDNIDEYVRNTTTRAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIV
QQIAILMGCAVLPHLKNLVEIIEHGLTDENQKVRTITALSLAALAEAAAPYGIESFDSVL
RPLWKGTRSHSGKVHAAFLKAIGFIIPLMDAEYASFYTKGVMPVLIREFKSPDEEMKKIV
LKVVKQCVSTEGVQADYIRSQCVISTQCLDPDCIRSHRVLSAFFKHFWVRRMALDRRNYK
QLVETTVEMANKVGVPDIVGKIVEDLKDESEPYRRMVMETIEKVVANLGTSDIDPRLEEL
LIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQ
AADLISRIAIVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHK
KGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVAPLLEDALMDRDLVHRQTAAS
AIKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHLINAVMEAIEGMRVALGAAVVLNYC
LQGVFHPARKVREVYWKIYNSLYIGAQDALVASYPALGDLGNNDIFSRPELTMFV
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggcggcgtctggcgatgaagggaggagctcactggggcgggagtgctcatcgaagcag
ggccggccgaagccgcgcccaggagtgctcgttagggcggcctgcgggctccgggaggcc
gagccagggcggggagccctgcggccggtggcggcgcgagaaggggtcggcgcgggccgg
gtggacggcggcgttgtggggtcggggtggggttgggaggccggggcggggtcgggtgga
cggcggcgcagcgaggaggggcggagagggtcggggcgagggacggggaggggcacgggc
ggcggcaggcggcggggagcggtgcgggtggagcggcggcgcagcgtgggggcggcgggg
agcaccgcagcgtcgggggcgcgatggggaatgagtggaggggtggatgagctggtccgt
ccatttgtgcacaagattcttgtagttatcgagccacttttgattgatgaggattactac
gctcgtgctgagggcagggagattatctcaaatcttagcaaagctgccggtcttgctact
atgattgccgctatgagaccggatattgataacattgacgagtatgtgaggaatacaact
actagggcattcagtgtggtggcttctgctttgggtatccccgccctcctcccattcttg
aaggctgtttgtcagagtaagaagtcctggcaagctcgacacactggtatcaagattgtt
cagcagattgctattctcatgggctgtgctgttctgcctcaccttaagaacctagttgag
attattgagcatggtctaactgatgagaaccagaaagtgcggacaatcactgctctctct
cttgctgcacttgctgaagctgctgcgccctatggtatagaaagttttgatagtgtgttg
aggcctctctggaagggtaccagatctcacagtggaaaggtccatgctgccttcttgaag
gctattggtttcatcatccctcttatggatgctgagtatgccagtttctacacgaagggt
gtgatgccagtcttaatcagagaattcaagtccccggatgaagagatgaagaagattgtc
ctgaaggttgtgaagcagtgtgtcagtacagagggtgtacaggctgattatatccggagt
cagtgtgtcatcagcacacagtgtttagatcctgattgtatccggagtcacagagtcctt
tcagcgttcttcaaacacttctgggttaggagaatggctctagatcgtaggaactataag
caacttgtggaaacaacagtagagatggcaaacaaggtgggagttcctgatatcgtcggg
aagattgttgaggatctgaaagatgaaagtgagccttacaggagaatggtgatggaaaca
attgagaaggtggtggccaacttgggtacctcggatattgatcctcgtctggaggagctg
cttattgatggcatcctgtatgctttccaggagcagacaagtgatgatgcaaatgtcatg
cttaatggctttggagctgttgtgaatgcgcttggccagagggtcaagccttaccttccg
cagatatgtggtaccatcaagtggcggttgaacaacaagagtgcaaaagttaggcaacaa
gctgctgatctgatctcaaggatagctattgtgatgaagcagtgccaggaggaacagctt
atgggtcacctgggtgttgtgctatatgagtacttgggggaggagtatcctgaggtgctg
ggttcaattctcggagcgttgaaggctatcgtgaatgtaattggcatgactaagatgacg
cctccaatcaaggatcttcttcctcgtctgacccccatattgaaaaataggcatgagaag
gtccaagagaactgcattgatctagttggtaggatagctgatcgcggagcagaattcgta
ccagctcgggagtggatgaggatttgttttgagctgctggaaatgttgaaggctcacaag
aagggtatcagaagagccactgtgaacacatttggttatattgccaaggcaatcgggcct
caggatgtgttggccactctgttgaataacttgaaggtgcaggagcgacagaaccgtgtt
tgcacgactgtagcaattgctattgttgctgaaacttgctcacctttcacagttttgcct
gccctcatgaatgagtaccgggttccggagctcaatgtccaaaatggtgttttgaaatct
ctctctttcctctttgagtatattggtgagatgggcaaagattacatatatgcggtcgct
cccttgcttgaagatgcactgatggacagggatctggttcacaggcagactgctgcgtct
gctatcaagcatatggctctaggagttgcaggcttgggttgtgaggatgctcttgtccat
ttgctcaactatgtctggcccaacatatttgagacatctccccatctcataaatgccgtc
atggaagctatcgagggaatgcgagttgctctaggcgcagccgtggttctgaattattgc
cttcaaggcgtcttccatccagcaaggaaagtacgtgaagtatactggaagatctacaac
tcgctgtatattggcgcacaggatgcacttgtggcttcttatcctgcactaggcgatctt
ggaaacaacgacatcttcagccgtccagagctaaccatgttcgtgtga

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