Triticum urartu (red wild einkorn wheat): 125506861
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Entry
125506861 CDS
T08232
Name
(RefSeq) uncharacterized protein LOC125506861
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125506861
09123 Folding, sorting and degradation
03018 RNA degradation
125506861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125506861
03041 Spliceosome [BR:
tua03041
]
125506861
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125506861
mRNA degradation factors
5'-3' decay
Lsm complex
125506861
Spliceosome [BR:
tua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125506861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TOP_N
DUF150_C
Motif
Other DBs
NCBI-GeneID:
125506861
NCBI-ProteinID:
XP_048527520
LinkDB
All DBs
Position
5:complement(139381705..139384191)
Genome browser
AA seq
146 aa
AA seq
DB search
MAGRKEMALNLAKFIDKGVQVKLTGGRQVTGTLKGYDLLLNLVLDEAVESEREGELEEIE
KGLEPLWERLVHLLERIVDRLNVVHHIKAVKDSPDLCAAVEDVQMLAFHVSSRASRRRSR
KKHSSSSSELVQGVMKPLMLIRIGTN
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgcaaggagatggcgctcaacctggccaagttcatcgacaagggcgtccag
gtcaagctcaccggcggccgccaagttacaggaactttaaagggatatgacctactgctg
aacttagtgctggatgaagcagtcgagtctgaaagagagggcgagctggaggagattgag
aagggcttggagcctttgtgggagcgcttggtccacctgctcgagcgcatcgttgacagg
ctgaacgttgttcaccacatcaaggctgtcaaggactcgcccgacctctgtgccgccgtc
gaggatgtccagatgctagcgtttcatgtttcatcccgagcatcaagacgaagaagtcgg
aagaagcatagttcaagctcatcggagctagttcaaggagtaatgaagcccttgatgctg
atccgtattggaacaaattga
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