Triticum urartu (red wild einkorn wheat): 125508018
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Entry
125508018 CDS
T08232
Name
(RefSeq) endoribonuclease Dicer homolog 2a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tua03036
]
125508018
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125508018
microRNA pathway
RISC loading complex
125508018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Helicase_C
Dicer_dimer
PAZ
ResIII
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125508018
NCBI-ProteinID:
XP_048528519
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All DBs
Position
5:complement(85670482..85697020)
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AA seq
1398 aa
AA seq
DB search
MGDAAAVAVAAVAAATEEAHKEDPEIVARWYQLEALERAMSGNTVAFLDTGAGKTLIAGL
LLRAYAHRVRKPARDYAVFLVPTRVLVEQQARVIEAHTDLRVSKFTGDMGVDFWNAAIWR
RVVDDAEVLVMTPQILLDNLRHSFFSLQDIALLIFDECHRAKGNSPYACILKEFYHPVMN
SRPRGPLPRIFGMTASPTDSKNLLQESYSKRIVELENLLNSKVYTVDNESALSEYIPFAT
TRIVQYDDYIIPSNSHNHIKSCLDKLQEKHLEVLKANLHGLSRKNAKKGISKLHKAFLYC
TANLGVWLAAKAAEIHSTTNEQFLSFWGEELDKNVEGFVRSYSEEVYRELSCFSKRGHIG
EDFAADLQDGLLTPKVHCLVQFLLEYRHMQDLRCIVFVERVVTSIVLESLLSTINQMPGW
IIKHIAGNRPMFHNQSRNKQTEIVDAFKGGKVHIIVTTQVLEEGLNVPGCHLVIRFDPPT
TGRSFIQSRGRARMPNSDYVLLVRRGDAEAHSKTLKFLASGQIMREASLKLASTMCQPLE
DTLLQEEYYRVESTGATVTMNSSVQLIYFFCSKLPSDEYFKPLPRFIIDKELRTCTLYLP
NSSPVQAVNTEEVSALKKAVCLKACRELHAVGALTDYLLPEFGFPCEEEPDIVVEKYQHE
QPEYFPEEFVYNWLSFSRLGIYYCYKISVEGCLKTTYCPNDILLAVKCDLGPDFVSTSLK
NFGEQDNASVAMKYVGIIHLNQEQVVMARRFQTTILSLLINKDHSEVINAVKYSHEMQVS
IGIVYLLLPLVSGKVDWCSIKFSTSQVYDASNKDIRHCHSCKQVDLLQTKDGPLCRCMLQ
NSIVCTPHNSKFYAVNGFLDLNSKSLLHLRDGSALTYINYFNTRHGLSLTHESQPLLAAR
NPVEVRNFLQKRHYKNKKESRTSHGVELPPELCRLVMSPVSNNTLYSFSVIPSVMYRIQC
LLLSAKLKDQLGPTMQQFAIPALKILEAVTTKECQEEFSQESLETLGDSFLKYVATQHLY
GKYKLQHEGTLTKMKKNLISNAALCQLACSNNLVGYIQGEEFNPKGWIIPGLGYDMCGNS
KISFLSSNDMHTLRKMSVRSKRIADTVEALIGAYLGAAGEQAAFVFLKSLGLDIEFHSNI
PLERKIVLKSEKFINVRSLEMILGYEFKDTSLLVEALTHGSYQTAGATACYQRLEFLGDA
VLDYLFTIYFYNQYPECTPELLTDLRSASVNNNCYAHAAAKAGLNKHILHSSLQLHGRMA
YYFENFKQPFTGPSHGWEAGIGLPKVLGDVIESLAGAIYLDSKYDKEVVWKSMKQLLEPL
ATPETVERDPVKLLQEFCARRSYSSSYTKAHKDGVSSVVAEVQVEGTTYTATETGPDKIV
AKKLAAKSLLNNLKAIVP
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgccgccgccgtcgccgtcgccgccgtcgccgccgcgacagaggaagcacat
aaggaggatccggagattgtagcgagatggtaccagctggaggcgctggagcgggccatg
agcgggaacacggtggctttcctggacacgggggccgggaagacgctcatcgcggggctg
ctgctgcgcgcctacgcgcaccgcgtgcggaagccggcgcgggactacgccgtcttcctc
gtccccacccgcgtgctcgtggagcagcaggcacgggttatcgaggcgcataccgacctc
cgcgtgtccaagttcaccggcgacatgggcgtcgacttctggaacgccgcaatctggcgc
cgcgtggtggacgacgccgaggtgcttgtcatgacgccgcagatcctcctggacaacctc
cgccacagcttcttcagcctccaggacatcgccctgctcatcttcgacgagtgccaccgc
gccaagggcaactccccgtatgcgtgcattctcaaggaattctaccaccctgtaatgaat
tctagaccacggggccctctgccgaggatatttgggatgactgcttcgcccacagattca
aaaaatctgctgcaagagagctattcgaaacgaatcgtcgaactggagaatctattgaat
tcaaaggtgtacacggttgacaatgaatcggctttatcggaatacataccatttgccact
acgaggattgtgcagtacgatgattatatcatcccatccaactcacataaccatattaag
agttgtttggacaagttgcaagaaaagcatttagaagtcctcaaggcaaatctacatgga
ttgtctcggaaaaatgcgaagaaagggatatcaaaattacacaaggcattcttatattgc
acagctaatcttggagtatggctagcagcaaaggctgctgagatacactcaacaactaac
gaacaattcttatctttctggggtgaagaactggataagaatgttgaaggctttgttaga
agctatagtgaagaagtatacagggaactctcatgtttttcaaagagaggtcatattggt
gaagattttgcagctgatttgcaagatgggttattgacacctaaagttcattgtcttgtt
cagtttcttctggaatacaggcacatgcaagacttaagatgcattgtatttgtcgagaga
gttgttacaagcattgtattggagtctctcctgtccactatcaatcaaatgcctgggtgg
attattaaacacattgcaggaaacagacctatgtttcacaaccagagtagaaataaacaa
acggaaattgttgacgcctttaaaggaggaaaggtacatataattgtgaccacacaagta
ttggaggaggggctgaatgtgccaggttgtcacttagtaattcgctttgatccaccaaca
actgggcgcagctttatacagtcacgtggtcgagctcggatgccaaactctgactatgtt
ttgcttgttagaaggggggatgcagaggcccactctaagacactgaagtttcttgcaagc
gggcaaataatgcgggaagcatctctgaagcttgcatctactatgtgtcaaccacttgaa
gacaccttgttgcaggaagaatattaccgtgttgaatccactggtgcaactgtgactatg
aactccagtgtccagttgatttattttttctgctcgaagctcccatctgatgaatacttt
aaacctctaccgagattcattattgacaaggaactacgtacttgcaccctgtaccttccc
aatagcagccctgtgcaggctgttaatacagaagaagtttctgccctcaaaaaggcagtt
tgtcttaaagcctgccgagaattacatgctgtcggcgctctaacagattatctgttacca
gaatttggttttccatgtgaagaagaacccgacattgttgttgagaaataccaacacgag
cagcctgagtactttccagaggaatttgtgtacaattggttatccttttctcgtcttgga
atatattattgctacaagatttcagtagaagggtgcttgaaaacaacttattgtccaaat
gatatacttctagctgtgaaatgtgatttgggaccagactttgtctctacctcactaaaa
aattttggtgagcaagacaatgctagtgttgccatgaaatatgtgggaatcattcatttg
aatcaagaacaggtagttatggcaagaagatttcagactactattctttctttgcttatt
aataaagaccattctgaggtcattaacgctgttaaatactcccatgagatgcaagtgtcc
attggaattgtctatctactgctacccttggtttctggcaaagttgattggtgcagtatc
aagttctcgacctcgcaagtatatgatgccagtaacaaggatatcagacattgccattct
tgtaaacaagttgatttactgcaaacaaaagatggtcctctgtgcagatgcatgcttcaa
aattccattgtttgtacccctcacaatagcaaattctatgctgttaatgggttccttgac
ttaaattccaaatctcttctgcaccttcgtgatggcagtgcccttacctacataaactat
ttcaatactaggcatggactcagtctaacacatgaaagtcaacccctgttggcagccagg
aatcctgttgaagtgcggaatttcctccagaagcgccattataaaaataaaaaagaatcg
cgcacttcacatggtgttgagttgccacctgagctctgcagactagtcatgtcaccggtg
tctaataatactctgtacagcttctcggtcattccttctgtgatgtaccgcatccaatgt
ctgcttctttcagcaaagttgaaagatcaactgggcccaacaatgcagcagttcgccata
ccagctctgaagattctagaagcagtaacaaccaaggaatgccaagaggagttttcacag
gaatcattagaaactcttggggattctttcctcaagtacgtcgccacacaacatttgtat
ggcaaatacaagcttcagcatgagggaacattaaccaagatgaagaaaaacctgatctcc
aatgcagctctatgccagctagcctgcagcaacaatcttgtgggttacattcaaggggaa
gagtttaacccaaaaggttggatcattccagggcttggttacgacatgtgtggtaacagc
aaaatttcatttttaagctccaatgatatgcacactttgagaaaaatgtctgttagaagt
aagagaatagcagatacagttgaggcgttgattggagcctaccttggtgctgccggagaa
caggctgcatttgttttcttaaaatcattaggattggatatagaatttcacagcaatatt
ccacttgaaaggaagattgtattaaaatccgaaaagttcatcaatgtgagaagtttggaa
atgattcttggttatgagttcaaggatacctcattgctggtggaagcattgacacatggg
tcataccagactgctggcgctactgcatgctatcagaggcttgagtttctcggtgacgct
gtgttggactatctcttcactatatatttctacaatcagtaccctgaatgtactccagaa
ttgttgacagatcttagatctgcttccgtcaacaacaattgctatgcgcatgcagctgct
aaagcaggactaaacaagcacattcttcattcgtcattacaattgcacggaaggatggct
tactactttgagaattttaagcagccatttacaggtccatcacatggttgggaagctggc
attggtctacccaaggttcttggggatgttattgaatcattagctggtgccatttatctt
gacagcaagtatgacaaagaggtggtttggaaaagcatgaaacagctattggagcctctt
gcgacgccggagacggttgagcgtgacccagtgaaactgctgcaggaattttgtgctcgc
aggtcttatagcagttcttacacaaaggcccacaaagatggagtatcttcggtggttgcg
gaggtacaggtagaaggcactacctacacagcaacagaaactggccctgataagattgtc
gccaaaaagcttgcagcgaagtcgctgctaaataatctgaaggctatagtaccatga
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