Triticum urartu (red wild einkorn wheat): 125508059
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Entry
125508059 CDS
T08232
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03440
Homologous recombination
tua03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125508059
03450 Non-homologous end-joining
125508059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tua03032
]
125508059
03400 DNA repair and recombination proteins [BR:
tua03400
]
125508059
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125508059
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125508059
BRCA1-C complex
125508059
NHEJ (non-homologous end-joining)
MRX complex
125508059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_13
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125508059
NCBI-ProteinID:
XP_048528581
UniProt:
A0A8R7QDG7
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All DBs
Position
5:complement(98199298..98220670)
Genome browser
AA seq
1316 aa
AA seq
DB search
MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR
SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI
NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDSIAQDQEKSDALKT
QMEDLKTNIQAVENKILRTETSMVDLRKLQEQISTKATARSTYFTLQQQQYAALSEENED
TDEELKEWQTKFEEKIALLETKIAKLEREMNDEYAKSSLLSETINDSTREIGKLQAEADA
HMSVKHERDSAIRTIFNKHNLGPVPDAPFTNDIAMNLTNRTKARLSNLEDDLQEKKKTNE
TQLEFLWGRYLKVNARYSEVDGQIQSKKESKIGVLRRIKDKENERDAAETELSRHNLARI
DERERHLQIEVERKTIALGERDYDLIISQKRSEIYTLDHKIKALHREKDNIATDADDRVK
LELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPHEKDVKKEITQAFGSVDSEYNDLNS
KSQEAEQQLKLAQMKIDAAKSHLSKLQKVLDAKRKHLNSKLQSIAKVSVDINAYPKILKD
AMDERDKQTNNFSYAKGMRQMYEPFEKVARQHHKCPCCDRAFTPDEEDLFVKKQRTTGTS
TAERLKVLAENLSVAEDLFNQLDNLRVIYDEYVKLEKETIPLAEKDLEQLSADKSEKEQI
SDDLVSVLAQVKMDRDGVEVLLRPVDTIDRHVQEIQELEPQVKDLEYKLDSRGQGVKSVD
EIQLELISVQRARDTLTGEVDDLRDQQKMLSEDLSNAQMRWHALREEKLRASSVLLKFKK
AEEDLVHFAEEKEQLILDQKHLEEALVPLSKERESLLQEYKALKERFDQEYDQLAERKRG
FQQEIDVLGTLNTRIKGYLDSNKVEKLNELQERHTLSLSQLQKCEARKQDISVELDKSKQ
LLRSQDQLKRNIDDNLNYRKTKAEVDRLTHDIELLEDNVLSIGSMSTIEADLKRHAQEKE
RLLSEYNRCQGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLDRYY
AALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISINSDSEGAGTRSYSYRVVMQN
GGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMESRKGQENFQLIIITHDERFAQLIGQRQLAEKYYRISKDEQQHSKIEAQEIFD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtggacaagatgctgatcaaggggatccggagcttcgacccggagaacaag
aacgtcatcaccttcttcaagcccctcaccctcatcgtcggctccaacggagccggcaaa
accaccatcatcgagtgcctgaagctgtcctgcaccggcgagttgccccccaactcccgc
tccggccacaccttcgtccatgaccccaaggtagcaggtgaaactgaaacgaaagggcag
attaagctgcggtttaagacagcagcaggaaaggatgtggtgtgcatccgctctttccag
cttacccagaaggcatcaaagatggagtttaaggcaatcgagagcgtcctccagactata
aatccacacacgggcgagaaggtttgtctcagctacagatgcgctgatatggatagggag
attccagccctaatgggtgtttcgaaggctatattggagaatgttatatttgtgcaccaa
gacgaatccaattggccattacaggacccttcaacacttaagaaaaagtttgacgacatc
ttttctgctacccgctataccaaagctctcgaagtcataaagaaacttcacaaggaccaa
gcacaagaaatcaagacttttaggttaaagttggagaaccttcagactcttaaagatcaa
gcatacaggcttcgtgacagtattgcacaagatcaagagaagtcagacgccttaaaaact
caaatggaggacctgaaaacaaacatccaagctgtggaaaacaaaatccttcgtaccgaa
acaagtatggtggacttgaggaaacttcaggagcaaattagcaccaaagcaactgctaga
agtacatattttacacttcagcagcaacagtatgctgctctttctgaggaaaatgaagat
actgatgaggagctgaaggagtggcaaacaaaatttgaagaaaaaattgcattactggaa
acgaaaatcgctaaacttgaaagagagatgaatgatgaatatgcaaaaagctctctgcta
tctgagaccatcaatgattcaacacgcgaaataggaaagctccaggcagaagctgatgct
cacatgtccgtgaagcatgaaagagattcagccatcagaacgatattcaataaacataat
cttgggccagttcctgatgctccttttaccaatgatattgccatgaaccttacaaacaga
actaaagcaagactatcgaatctcgaggacgatttgcaggaaaagaagaaaactaacgag
acacagttagaatttctttggggacgttatcttaaagtaaatgctcgctactctgaagtt
gatggccagatacagtctaagaaggaatctaagataggtgttttaaggcgcataaaggat
aaagagaatgagcgagatgctgcagagacggagctttcaaggcataatctggcccgtatt
gatgaaagagagcggcatctgcaaattgaagttgagaggaagacaattgcgctgggagaa
agagactatgatttgattataagtcagaagcgctcagagatatataccttggatcacaag
ataaaagcacttcaccgagagaaagataacatagcaactgatgctgatgacagagtaaaa
ttagaactcaagaaggatgagttggagaagtgcaagaagaaacttaaaaagatatatgat
gaacataaggataaatttagaagtgtccttaagggaaggcttcctcatgagaaggatgtc
aagaaggagattactcaagctttcgggtctgtagactcagaatacaatgatttgaactca
aaatctcaggaagcggaacaacagttgaaattggcacaaatgaaaattgatgctgctaaa
agccacttgtcaaagctccaaaaagttttggatgcaaaaaggaagcatctgaactcgaaa
cttcaatccattgctaaggtatctgttgacatcaacgcttaccccaagattctgaaagat
gccatggacgagagagataaacagacaaataatttcagttatgctaagggaatgcgccaa
atgtatgaaccttttgaaaaagtggcccgccagcatcacaagtgtccttgctgtgatcgt
gctttcacacctgatgaagaggacctctttgtaaagaagcaaaggacaacaggtacaagt
accgcagagcgcttgaaagtgctggcagagaacttatcagttgctgaagacttattcaat
caattggataatctccgtgtgatttatgatgaatatgtgaaactggagaaagagactata
cctttagcagagaaggatttggaacaactttcggcagataaaagtgagaaggaacagata
tctgatgatcttgtgagtgttcttgctcaagttaaaatggacagggatggagtggaagtc
ttgttacgtccagttgatactattgacaggcatgtgcaagaaatacaggagttagaacca
caagtcaaagatcttgaatataagcttgattctcgtggccaaggtgttaaatctgtcgac
gaaattcagttggagctgatctctgtgcagagggcaagggacacattgactggtgaagta
gacgatctcagggatcagcaaaaaatgcttagcgaggatctatcaaatgctcagatgcgg
tggcatgctcttagggaagaaaaactaagagcttcaagtgtattgctgaagttcaaaaag
gctgaagaagatttggtacattttgccgaggaaaaggagcaactgatcctagatcagaag
catttagaagaagctcttgttccattgtcaaaagagagagaaagcttgttgcaagaatat
aaagctttgaaggaaaggtttgatcaggagtatgatcagctggcagaaagaaaaagggga
ttccagcaagaaatcgatgtacttggaacccttaacacacgcatcaaagggtacctggat
tcaaacaaagtagagaagcttaatgagttgcaggaaaggcataccctatccctgtctcag
ttacagaaatgtgaggcaagaaagcaagacatctcggttgagcttgacaagagcaaacag
ctattacggagccaagatcaattgaaaagaaacattgatgacaatctgaactacaggaaa
acaaaggctgaagtggatcgacttactcatgatatcgagttacttgaagataatgtgctt
tccatcggcagcatgtctactatagaagctgatcttaagcggcatgctcaagaaaaggag
aggcttctttcagagtataataggtgtcaaggaacaatttctgtttaccaaagtaatatt
tcaaagcacaaacttgaacttaaacagacacaatacaaggatattgagaagagatatttt
aaccaacttcttcaactaaagacaactgagatggcaaataaggacttggaccgatactat
gctgctttggacaaggctcttatgcggttccataccatgaaaatggaggagataaataaa
ataattaaggaattgtggcagcagacatacagaggccaagatattgattgcataagcatc
aattctgattctgagggtgcaggcactcgatcatatagctaccgtgttgtcatgcaaaat
ggtggtgctgagctggaaatgcgagggcgatgcagtgctggtcagaaggtgcttgcttct
cttataatcagactcgcactggcagagacattctgtctgaattgtggcatattagctctg
gatgagccaaccaccaatcttgatggaccgaatgctgagagcctagctgctgccctattg
agaataatggagagtaggaaaggccaggagaacttccagctgattataatcacccacgat
gagcggtttgctcagcttattggtcagaggcaacttgccgagaagtattaccgaatctcc
aaggatgagcagcaacacagcaaaatagaagcccaagagatatttgactga
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