Triticum urartu (red wild einkorn wheat): 125508524
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Entry
125508524 CDS
T08232
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125508524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125508524
03036 Chromosome and associated proteins [BR:
tua03036
]
125508524
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125508524
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125508524
PBAF complex
125508524
GBAF(ncBAF) complex
125508524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF7685
Motif
Other DBs
NCBI-GeneID:
125508524
NCBI-ProteinID:
XP_048529207
UniProt:
A0A8R7QAG6
LinkDB
All DBs
Position
5:complement(253541805..253554346)
Genome browser
AA seq
785 aa
AA seq
DB search
MPRKASSSSDAKLKWRKRKRSQDTSPLKQSGGADHSDDSDSAAANDEDDALHGSANGGET
LGARGGDDDTVPDLREAEVLSSAEPVSGFPSATRRTISRLHPSVLAVIAADRALAGGASC
ASAPPAPALENISHGQLQVLAAMLPDHPSLSNDPDKPSSYVCTVPPLMECQGVPKQFYSK
LLVVPRHADWFSPATVHRLERQVVPHFFSGKSPGHTPEKYIMLRNKVIVKYLERPSRRLA
FAECQGLVTSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRLASSLIREEQTGELQLA
SAPLKSIDGLILFDRPKCSARAEDIASVASTSSALEVPNGDTGFADLDEKIWERLSENFC
SYCSQPLPSLHYESQKEADISLCLDCFHDARFVPGHSSLDFERVDGTKDGSDNDGDSWTH
EETLLLLEGLEKYNDNWNAIAEHVGTKSKAQCIHHFIRIPVEDGLLESIEVPEASVSSRV
QSNGFSYSNSNGGISGSVPQSSQPGQQLPFVNSANPVMSLVAFLASAVGPRIAASCANAA
LSVLTRDDSRMCSEGNDVMGQAARPNYDASSSVSPENVKYAAMCGLSAAATKCKLFADQE
EREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARFA
SSGGPMPGGSSSTMASNPMSQASPRSPAMPGSMPPASMQAFYSNNMQGHPAQMAFLQQQQ
RQQQQQQQQMLSFGPRLPLSAIHPGSSSSAAPSVMFNPGMPSSATPNHHSMLRPPPSGSN
NSSFG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggcctcgtcctcctcagatgcgaagctcaagtggcggaagcggaagcgc
tcacaggacacctccccattgaagcagtccggcggggccgaccactccgacgattctgac
tccgcagcggcgaacgacgaagacgacgcgctccacggctccgccaacgggggcgaaacc
ctaggcgcccgtggcggtgatgacgacaccgtgcccgacctccgggaggcggaggtgctc
tcctcagcggagcccgtctctggcttcccctcggctacccgccgcactatcagccggctc
catccctctgtgcttgcagttatcgccgctgatcgtgccttggcgggtggtgccagctgt
gcttcggctccgcctgcacccgcgctggagaacatttcgcacgggcagctccaggtgcta
gcagccatgctccctgaccacccatccctgtccaacgaccctgacaagccgtcctcctat
gtctgcaccgtgcctccactcatggaatgccaaggcgtgcccaagcagttctacagcaag
ttactcgtcgtccccagacacgcagattggttctcgccggcgactgtacacaggttggag
aggcaggtggtgccacattttttctcagggaagtccccagggcatacaccagagaagtac
ataatgctgaggaataaggtgattgtgaagtatttggagcgcccgtcaaggagacttgca
tttgctgagtgccaggggcttgttacaagcacggctgaattgtatgacctgagtcggata
gtcaggttcttggacacttgggggattattaattacctcgcggctggatctgtgcaccgg
ggcttgaggctggcatcatctttaatcagggaggagcaaacaggggagctgcagctggcg
tctgcaccattgaagtcaattgatggtctgattttgtttgatcggccaaaatgcagtgcc
cgagcagaggatatcgcttctgtggcatcaacttcgtctgctctggaggtgccaaatggt
gatactggctttgcagacttggacgaaaagatttgggagaggctgtctgagaacttctgt
agttattgttcacaacctttgcccagtttgcactatgaatcacaaaaggaggcagacatt
tctctttgcttggattgcttccatgatgcaagatttgttcctgggcactcaagcttagat
tttgagagagtggatggaacgaaagatggatcagacaatgatggggacagctggactcac
gaggaaactttactgttgctggagggcttagagaagtacaatgataactggaatgctatt
gctgaacatgtcggaacaaagtctaaggcgcaatgtattcaccattttattcgtattcca
gtggaagatggtctgttagagagcattgaagtaccagaagcatctgtttcatctagagta
caaagcaatggcttttcatattcaaattccaatggcggcatttcaggtagcgttcctcaa
agtagccaacctggacaacagcttccatttgttaattccgctaatccagtcatgtcactg
gttgcatttttggcctctgcagtaggaccaagaatagcagcatcctgtgcaaatgcagca
ctatctgttttgacaagagatgattccaggatgtgttcagaaggcaatgatgtcatgggt
caagctgctcgtccaaactatgatgcctcatcatccgtctctcccgaaaacgtcaaatac
gctgcaatgtgtggcttgtcagcagcggcaacaaagtgcaaactttttgcagatcaggag
gagcgtgaaattcagagattagcggccaccatcataaatcaccagttaaagagattggag
ttgaagctgaagcaatttgcagaggtggagaccttgcttttgaaggaaagcgagcaggtt
gagagggccaggcagaatcttacagcccagcgtgtccggtttatgtcggctcgatttgct
tcctccggaggtcccatgcccggaggcagcagcagtaccatggcatcaaatccaatgagt
caagccagccctcgatcaccagcaatgccaggctcaatgccaccggccagcatgcaagcg
ttttacagcaataacatgcaggggcatccagcccagatggctttcttgcagcagcaacag
cggcaacaacagcaacagcagcagcagatgctctcatttgggccgcgcctgccgctctca
gctatccatcccggctcatcgtcatcagcagcacccagcgtcatgttcaacccgggcatg
cccagttcggctacccctaaccatcactccatgctgagaccaccaccctcagggagcaac
aattcaagttttggttaa
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