Triticum urartu (red wild einkorn wheat): 125508868
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Entry
125508868 CDS
T08232
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125508868
09123 Folding, sorting and degradation
03018 RNA degradation
125508868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125508868
03041 Spliceosome [BR:
tua03041
]
125508868
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125508868
mRNA cycle factors
Stress granule specific factors
125508868
Spliceosome [BR:
tua03041
]
Complex C
Other components
Complex C specific factors
125508868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_Nup35
HobA
Motif
Other DBs
NCBI-GeneID:
125508868
NCBI-ProteinID:
XP_048529620
UniProt:
A0A8R7QF33
LinkDB
All DBs
Position
5:331289341..331293986
Genome browser
AA seq
651 aa
AA seq
DB search
MAAQAASSASEGGSPAAAAAAAAAAASSFPATSLYVGDLDVSVQDAQLFDVFAQIGGVVS
VRVCRDVTSRKSLGYAYVNYNTPADAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTA
NIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKL
NGMLMNDKKVYVGPFVRKQERDNSPGNVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSV
VVMRDGDGRSKCFGFVNFESPDEAALAVQDLNGKKFSDKEWYVGRAQKKSEREMELKEKF
EKNLQEAADKYQNTNLYLKNLDDTVDDEKLRELFADFGTITSCKVMRDSNGASRGSGFVA
FKSADDASRALAEMNNKMVGNKPLYVALAQRKEDRKARLQAQFSQMRPVPMAQTVGPRMQ
MLPPGVPVGQQMFYGQPPAFINPQPGFGFQQPFMPGMRPGGAPMPNFMMPMVQQGQQPQR
PAGRRAGAGGMQQSMQMGQQQMMGRGGGRGYRYPTGRGMPDPAMHGVGGVMTSPYEMGGM
PMRDAGASQPVPIGALASALANSPPETQRMMLGENLYPLVDQLEHDQAAKVTGMLLEMDQ
TEVLHLLESPDALKAKVAEAMEVLRSAQQHTNQSPEQQLASLSLNDGLISS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaggcggcgagctcggcgtcggagggcggctccccggccgcggcggccgct
gcggctgcggcggcggcatcgtcgttcccggcgacatcgctttacgtgggcgacctcgac
gtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccagatcggcggcgtcgtctcc
gtgcgcgtctgcagggacgtcacctcgcggaagtcgctcggatacgcctacgtcaactac
aacaccccggctgacgctgcacgggctcttgaaatgctcaacttcactcctatcaatggg
cggcctatcaggataatgtattctaaccgtgaccccagcttgcgcaagagtggcacagca
aatatatttattaagaatcttgacaagtcaattgacaacaaagctttgtatgacacattt
tgtgtgtttggaaacattctttcatgtaaagttgcaacagatcctgctggggaatcaaag
ggctatggcttcgttcagtatgagcgggatgaggctgctcatgctgctatcgagaaactg
aatgggatgcttatgaatgacaagaaggtgtatgttgggcctttcgttcgtaagcaggag
agagataactctcccggcaatgtcaagttcaataatgtctatgttaagaacctagctgag
actaccactgaagatgacttgaaggaaatctttgggaagtttggagcaataacaagtgtt
gttgtaatgcgggatggggatggaagatccaagtgttttggatttgtgaattttgaaagt
ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa
tggtatgttggaagagcgcagaaaaagtcagaaagggagatggaattgaaagagaagttt
gaaaagaaccttcaagaggcagcggataagtatcagaataccaacttgtatctgaagaac
ttggatgatactgttgacgatgaaaagttgcgtgaactttttgctgatttcggaactatt
acttcctgcaaggttatgcgtgattcaaacggcgctagcagaggttctggatttgtcgct
tttaaatctgctgacgatgcttcccgagctcttgctgaaatgaacaacaagatggttggc
aataaaccactttatgttgcactcgcacagcgcaaggaagacaggaaagctaggctgcag
gcacagttttcacaaatgcgtcctgttccaatggctcaaactgttggtcctcgtatgcaa
atgttacctcctggtgttccagttggtcagcaaatgttctatggccagccaccagcgttt
attaacccacagcctggatttggcttccagcaacctttcatgccgggaatgaggccaggt
ggtgctccgatgccaaactttatgatgcctatggttcagcaaggacaacaaccacaacgc
ccagctggtaggcgagctggtgctggtggaatgcagcaatccatgcagatgggtcagcag
cagatgatgggtaggggtggtggtcgtggttaccgctatccgaccgggcgtggcatgcct
gatcctgcgatgcatggtgttgggggggtgatgacatccccatatgagatgggagggatg
cctatgagagatgccggtgcgtcacagccagttccaattggggcattggcttctgcactt
gccaattcacccccagagacgcaaagaatgatgcttggcgagaacttgtaccctcttgtt
gatcagctggagcacgaccaggctgccaaggtgaccggcatgcttctggagatggaccag
actgaggtgcttcacctgcttgagtcgccagacgctctcaaggccaaggttgctgaagcc
atggaggttctccgcagcgctcagcagcacaccaaccagtcccctgagcagcagctggct
tcgctctcgctgaatgacggcctcatctcttcctaa
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