Triticum urartu (red wild einkorn wheat): 125508872
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Entry
125508872 CDS
T08232
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125508872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125508872
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125508872
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRP_TPR_like
Coatomer_E
RVE6
Motif
Other DBs
NCBI-GeneID:
125508872
NCBI-ProteinID:
XP_048529624
UniProt:
A0A8R7UHR0
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Position
5:332388483..332395498
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AA seq
820 aa
AA seq
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MEPAAPKEAPPPQPQPGVEEDGTLSATAAMARDAAVLFQSRRYAECADVLAQLLLKKEGD
PKVLHNMAIAESFVDGCPDPKKLLEILGNVKIRSDELACASREQADSANGVGNNTSSEPR
GSGIAPLISAAHNATAYGDEFDTTIITFNTALILYHLHDYESALSVLEPLYRNIEPIDET
TALHVCFLLLDITLALQDASKAADVIQYLERSFGVANTGNQNEIASTVQQQPAQLKPAKS
NTPPDSDSNTCPGGSEILSVGSFSDDTLEFESFYSTLDGGNHLGRPILNEFSRASADLAA
TAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNYR
KAVKLLSTPNNRTEPVMLTMFYNNLGCILHQQRSNHTSVLCFSKALKYSLSLRSEKPLKL
SALSQDKSCLISYNCGIQHLMCGKPLLAARCFREAMPLLYHRPLFWLRFAECSLLALEMG
FLTASGATSCKDEIEIYVVGSGKWRHLVISPVNSGSHLSDFGSSGEHGNLISLRFARQCL
LNAQLLMDASEQKKMAISDTEECNQGSQCQKSSGQSTMSVESKVHSGPTTNANGEQKGAA
SLNATLQSSLAMYDDIIRKENLKIRQAILGDLAFVELCLENPLKALSIANSLLQVPDCSR
MYLFLGHVYAAEALCLLNRLKEAVDQLTVYLRDDNAIELPYSVENREKAPVEKDSDGEDS
VTPAMTKLTSEESQHSMSLKPEEACGVLYVDLGMTAAVQGELEQANYLVSRGFAMLPNSP
RALLASIYVDLLQGKAQEAIGKLRRCRNVRFKTSSVAASR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcggcgccgaaggaggcgccgccgccccagccacagcccggggtggaggag
gacgggacgctctccgcgacggcagctatggcaagggacgccgccgtgctgttccagagc
cgccggtacgccgagtgcgccgatgtgctcgcgcagctcctgctcaagaaggagggtgac
cccaaggtccttcataatatggctatcgcagaatcgtttgtggatggttgtcctgatcca
aaaaagttgcttgagattcttggcaatgttaagataagaagcgatgaacttgcctgtgca
tctagagaacaagctgattctgccaatggggtagggaacaatacttcttctgaaccaaga
ggcagtggcattgcaccgttgatttctgctgcacataatgcaacagcctatggagatgag
tttgacacaaccataataacattcaacactgctcttatcctttatcatcttcatgattat
gaatctgcactgtctgttttggagccattgtaccgaaatattgaacctattgatgagaca
actgctcttcatgtatgttttctgttattggatattacattagctttgcaagatgcatca
aaagccgcggatgtcattcagtacttggaaagatcatttggagtagctaatacagggaac
cagaatgaaattgctagcacagttcagcagcaacctgctcaactgaaacctgcaaaaagt
aacacgcctccagattctgattcaaatacttgtcctggtggatctgagattctttcagtt
ggaagtttttcggatgatacactggagtttgaatctttttactctactctggatggtgga
aatcacttgggcaggcctatcttaaatgagttctcgagggcatcagctgatcttgctgcc
acagctgctgatttgaaagttagactacaaatttacaaggtccggcttctacttctcaca
aggaacctgaaggttgccaagcgagaactcaaagttctaatgaacatggctcgtggtagg
gattcatctacagagcttctcttgaaatctcagctagagtatgcccgaggaaattatcgg
aaggctgtgaagcttttgagcacccccaataatcggactgaaccagtaatgctaaccatg
ttctacaacaatcttggttgtatactccatcagcagagatccaaccatacatcagtattg
tgcttcagcaaagcactgaaatacagcttatctcttcgctcagagaaaccattgaagctg
tctgcactatcacaagacaaatcttgtctgatatcatacaactgtgggatccaacatttg
atgtgtggtaaaccactgttagcagctcgttgttttcgtgaggccatgccgctcttgtac
catcgccccctcttttggctccgttttgctgagtgtagcctgctagctctagaaatgggc
ttcctcactgcaagcggtgctacttcatgcaaagatgagattgaaatttatgttgtgggg
tcagggaaatggcgccatttagttatcagtccggtgaactcaggaagtcatttatcagat
tttgggagttcaggtgaacatggaaatttgatatcactcagatttgctagacagtgtcta
ctcaacgcccaactattaatggatgcttctgagcagaaaaaaatggcgatttcagataca
gaggagtgcaaccaagggtcacaatgccagaaaagttcaggccagagcacaatgagtgtg
gaatccaaagtccactctggtccaacaactaatgcaaatggagaacaaaagggggccgcg
agcttgaatgccactttgcagagctctcttgctatgtatgatgacatcattagaaaagag
aacctgaaaattcgacaagccatcctgggggacctggcgttcgtcgaattgtgtcttgag
aatcccttgaaagctttgtctattgccaactcactgttgcaggttccagactgctccagg
atgtacttattccttggccatgtatatgcagctgaagctttatgtttgctgaacaggcta
aaggaggctgttgatcagttaactgtttatttgagagatgacaatgctattgagttgccc
tacagtgttgagaatcgtgaaaaggcccctgttgagaaagacagcgatggcgaggattca
gtcactcctgccatgacaaaacttacctcagaagaatctcagcactcaatgtctctcaag
cccgaggaagcctgtggggttctgtatgttgaccttggcatgactgctgcagtgcaggga
gagcttgagcaggccaactacctggtgagccgtggttttgcaatgttgcccaacagccct
agggcactgctagcatccatctatgtggatcttctgcaggggaaggcgcaagaagctatt
ggcaagttgagaaggtgcagaaacgtgagatttaagaccagtagtgtagcagccagcaga
taa
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